NR_3.5_83717.83

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Å	Date
1	5J7L\|1\|DA (rep)	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	2016-07-27
2	5J8A\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	2016-07-06
3	5JC9\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	2016-07-06
4	4YBB\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2015-03-18
5	5IT8\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	3.12	2016-07-27
6	4WOI\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2015-08-05
7	4WOI\|1\|CA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2015-08-05
8	6I7V\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	2018-12-05
9	5J91\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2016-07-06
10	4V9P\|1\|EA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
11	5J88\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	2016-07-06
12	4V9P\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
13	4V9P\|1\|GA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
14	4V9P\|1\|AA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
15	6LKQ\|1\|t	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin	X-ray diffraction	3.1	2020-05-06
16	4V9D\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
17	4V9O\|1\|AA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
18	4V9O\|1\|EA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
19	4WWW\|1\|RA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2014-12-24
20	4V9O\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
21	4V6C\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2014-07-09
22	5J7L\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	2016-07-27
23	4V7T\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2014-07-09
24	4U27\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
25	4WF1\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2014-11-05
26	5J8A\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	2016-07-06
27	5JC9\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	2016-07-06
28	4V7U\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2014-07-09
29	4V7V\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2014-07-09
30	4V52\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2014-07-09
31	4U24\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
32	4U25\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
33	4V9D\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
34	4U26\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
35	4V7S\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2014-07-09
36	4V57\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2014-07-09
37	4V52\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2014-07-09
38	4V57\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2014-07-09
39	4V9O\|1\|GA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
40	4U1U\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
41	4V85\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-ray diffraction	3.2	2014-07-09
42	4V54\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2014-07-09
43	4V64\|1\|DB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2014-07-09
44	4V50\|1\|DB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2014-07-09
45	4V54\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2014-07-09
46	4V64\|1\|BB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2014-07-09
47	4V50\|1\|BB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2014-07-09
48	4YBB\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2015-03-18
49	4U1V\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
50	5J88\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	2016-07-06
51	4V9C\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2014-07-09
52	4U20\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
53	6I7V\|1\|CA	Large subunit ribosomal RNA	23S ribsomal RNA	Escherichia coli	Bacteria	RF02541	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	2018-12-05
54	4U27\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
55	4V4Q\|1\|DB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2014-07-09
56	4V4Q\|1\|BB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2014-07-09
57	4U25\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
58	4U1U\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
59	4V9C\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2014-07-09
60	4U1V\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
61	5IT8\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	3.12	2016-07-27
62	4WF1\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2014-11-05
63	4U24\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
64	4U26\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
65	4U20\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
66	4V6C\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2014-07-09
67	5J91\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2016-07-06
68	4WWW\|1\|YA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2014-12-24
69	4V7T\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2014-07-09
70	4V7V\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2014-07-09
71	4V7S\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2014-07-09
72	4V7U\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2014-07-09
73	5J5B\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	2016-07-27
74	4V4H\|1\|DB	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2014-07-09
75	4V4H\|1\|BB	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2014-07-09
76	5J5B\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	2016-07-27
77	6HRM\|1\|1	Small subunit ribosomal RNA	stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA	Escherichia coli	Bacteria	RF00177	E. coli 70S d2d8 stapled ribosome	Electron microscopy	2.96	2018-12-19
78	7K00\|1\|a	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	Electron microscopy	1.98	2020-09-23
79	6XZ7\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).	Electron microscopy	2.1	2020-07-22
80	6PJ6\|1\|I	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	High resolution cryo-EM structure of E.coli 50S	Electron microscopy	2.2	2020-01-22
81	7N1P\|1\|23	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	Electron microscopy	2.33	2021-07-14
82	7PJS\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)	Electron microscopy	2.35	2021-10-20
83	7O1A\|1\|BA	Large subunit ribosomal RNA	Ribosomal RNA 23S	Escherichia coli K-12	Bacteria	RF02541	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan	Electron microscopy	2.4	2021-09-01
84	7BL4\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle	Electron microscopy	2.4	2021-05-12
85	7N2U\|1\|23	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	Electron microscopy	2.53	2021-07-14
86	7N2V\|1\|23	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)	Electron microscopy	2.54	2021-07-14
87	6YS3\|1\|b	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide	Electron microscopy	2.58	2020-09-30
88	6YSS\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	Electron microscopy	2.6	2020-08-19
89	6PCR\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compound 40o	Electron microscopy	2.5	2020-06-17
90	6PC6\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compound 47	Electron microscopy	2.5	2020-06-17
91	6PC7\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compound 46	Electron microscopy	2.5	2020-06-17
92	7N30\|1\|23	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	Electron microscopy	2.66	2021-07-14
93	6XZB\|1\|A2	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.54	2020-11-04
94	7N31\|1\|23	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	Elongating 70S ribosome complex in a post-translocation (POST) conformation	Electron microscopy	2.69	2021-07-14
95	7O1C\|1\|BA	Large subunit ribosomal RNA	Ribosomal RNA 23S	Escherichia coli K-12	Bacteria	RF02541	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan	Electron microscopy	2.6	2021-09-01
96	6TBV\|1\|23S1	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	Electron microscopy	2.7	2020-01-01
97	6TC3\|1\|23S1	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	Electron microscopy	2.7	2020-01-01
98	6PCQ\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to VM2	Electron microscopy	2.6	2020-06-17
99	7N2C\|1\|23	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	Electron microscopy	2.72	2021-07-14
100	6XZA\|1\|A2	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.66	2020-11-04
101	6QDW\|1\|b	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide	Electron microscopy	2.83	2020-01-15
102	6PC5\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compounds 46 and VS1	Electron microscopy	2.7	2020-06-17
103	7NSO\|1\|A	Large subunit ribosomal RNA	23S rRNA (2903-MER)	Escherichia coli	Bacteria	RF02541	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA	Electron microscopy	2.9	2021-07-14
104	5AFI\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	2015-03-11
105	7B5K\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.	Electron microscopy	2.9	2021-05-26
106	6WYV\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compounds 47 and VS1	Electron microscopy	2.75	2020-06-17
107	6PCT\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compound 41q	Electron microscopy	2.8	2020-06-17
108	6U48\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	E. coli 50S with phazolicin (PHZ) bound in exit tunnel	Electron microscopy	2.87	2019-09-18
109	6Y69\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	Electron microscopy	2.86	2020-07-01
110	6PCS\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compound 40e	Electron microscopy	2.8	2020-06-17
111	7O19\|1\|BA	Large subunit ribosomal RNA	Ribosomal RNA 23S	Escherichia coli K-12	Bacteria	RF02541	Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan	Electron microscopy	2.9	2021-09-01
112	6WNT\|1\|4	23s-5s joint ribosomal RNA	23s-5s joint ribosomal RNA	Escherichia coli	Bacteria	RF00001	50S ribosomal subunit without free 5S rRNA and perturbed PTC	Electron microscopy	3.1	2020-06-24
113	5NWY\|1\|N	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	Electron microscopy	2.9	2017-07-19
114	6WD0\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	Electron microscopy	3	2020-07-01
115	6WDE\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	Electron microscopy	3	2020-07-01
116	5H5U\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Mechanistic insights into the alternative translation termination by ArfA and RF2	Electron microscopy	3.01	2017-01-25
117	7OIZ\|1\|a	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	Cryo-EM structure of 70S ribosome stalled with TnaC peptide	Electron microscopy	2.9	2021-09-15
118	6ORE\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Release complex 70S	Electron microscopy	2.9	2019-06-19
119	6PC8\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compound 40q	Electron microscopy	2.9	2020-06-17
120	5MDV\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	Electron microscopy	2.97	2016-12-14
121	6H4N\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	Electron microscopy	3	2018-09-05
122	7AC7\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Structure of accomodated trans-translation complex on E. Coli stalled ribosome.	Electron microscopy	3.08	2021-08-18
123	7NSQ\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA	Electron microscopy	3.1	2021-07-14
124	6WNW\|1\|4	23s-5s joint ribosomal RNA	23s-5s joint ribosomal RNA	Escherichia coli	Bacteria	RF00001	Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA	Electron microscopy	3.2	2020-06-24
125	6ZU1\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-RNAP expressome complex in uncoupled state 2	Electron microscopy	3	2020-09-16
126	6ZTO\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-RNAP expressome complex in uncoupled state 1	Electron microscopy	3	2020-09-23
127	6ZTP\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-RNAP expressome complex in uncoupled state 6	Electron microscopy	3	2020-09-16
128	6PCH\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compound 21	Electron microscopy	2.9	2020-06-17
129	6OM6\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA	Electron microscopy	3.1	2021-02-10
130	6X7K\|1\|a	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site	Electron microscopy	3.1	2020-09-02
131	6YSR\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the P+9 stalled ribosome complex	Electron microscopy	3.1	2020-08-19
132	7PJY\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)	Electron microscopy	3.1	2021-10-20
133	7PJV\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)	Electron microscopy	3.1	2021-10-20
134	5MDW\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)	Electron microscopy	3.06	2016-12-14
135	6SZS\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis	Electron microscopy	3.06	2019-12-04
136	5MGP\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs	Electron microscopy	3.1	2016-12-14
137	7K54\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)	Electron microscopy	3.2	2021-07-28
138	7K53\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)	Electron microscopy	3.2	2021-07-28
139	7LV0\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)	Electron microscopy	3.2	2021-07-28
140	5MDZ\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the 70S ribosome (empty A site)	Electron microscopy	3.1	2016-12-14
141	6S0K\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA, tRNA-CCA	Escherichia coli	Bacteria	RF02541	Ribosome nascent chain in complex with SecA	Electron microscopy	3.1	2019-10-09
142	5U9G\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)	Electron microscopy	3.2	2017-03-22
143	5U9F\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)	Electron microscopy	3.2	2017-03-22
144	6WDD\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)	Electron microscopy	3.2	2020-07-01
145	5UYM\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	Electron microscopy	3.2	2017-06-07
146	7ACJ\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Structure of translocated trans-translation complex on E. coli stalled ribosome.	Electron microscopy	3.2	2021-08-18
147	6ENU\|1\|A	Large subunit ribosomal RNA	23S Ribosomal RNA	Escherichia coli	Bacteria	RF02541	Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)	Electron microscopy	3.1	2017-11-22
148	6X6T\|1\|a	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site	Electron microscopy	3.2	2020-09-02
149	6YST\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state	Electron microscopy	3.2	2020-08-19
150	7ABZ\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.	Electron microscopy	3.21	2021-08-18
151	6QUL\|1\|A	Large subunit ribosomal RNA	23S rRNA, P-site fMet-tRNA(fMet)	Escherichia coli	Bacteria	RF02541	Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid	Electron microscopy	3	2019-04-10
152	6VWL\|1\|2	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)	Electron microscopy	3.1	2020-06-03
153	5WFS\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	Electron microscopy	3	2018-05-02
154	7BL5\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli str. K-12 substr. MG1655	Bacteria	RF02541	pre-50S-ObgE particle	Electron microscopy	3.3	2021-05-12
155	7K55\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)	Electron microscopy	3.3	2021-07-28
156	7JT1\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)	Electron microscopy	3.3	2020-11-11
157	6WDG\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)	Electron microscopy	3.3	2020-07-01
158	6WDF\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)	Electron microscopy	3.3	2020-07-01
159	6WD1\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)	Electron microscopy	3.3	2020-07-01
160	6OG7\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)	Electron microscopy	3.3	2019-09-25
161	5WE4\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	70S ribosome-EF-Tu wt complex with GppNHp	Electron microscopy	3.1	2018-04-25
162	6OFX\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Non-rotated ribosome (Structure I)	Electron microscopy	3.3	2019-09-25
163	3JBV\|1\|b	Large subunit ribosomal RNA	RNA (2903-MER)	Escherichia coli	Bacteria	RF02541	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	Electron microscopy	3.32	2016-01-27
164	6C4I\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Conformation of methylated GGQ in the peptidyl transferase center during translation termination	Electron microscopy	3.24	2018-02-21
165	5WDT\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	70S ribosome-EF-Tu H84A complex with GppNHp	Electron microscopy	3	2018-04-25
166	7BV8\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Mature 50S ribosomal subunit from RrmJ knock out E.coli strain	Electron microscopy	3.14	2020-07-01
167	6ENF\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P	Electron microscopy	3.2	2017-11-22
168	7K50\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Pre-translocation non-frameshifting(CCA-A) complex (Structure I)	Electron microscopy	3.4	2021-07-28
169	7K52\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)	Electron microscopy	3.4	2021-07-28
170	6WNV\|1\|4	23s-5s joint ribosomal RNA	23s-5s joint ribosomal RNA	Escherichia coli	Bacteria	RF00001	70S ribosome without free 5S rRNA and with a perturbed PTC	Electron microscopy	3.5	2020-06-24
171	6OGI\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)	Electron microscopy	3.4	2019-09-25
172	5GAE\|1\|A	Large subunit ribosomal RNA	23S rRNA, tRNA CCA end (5'-R(PCPCP*A)-3')	Escherichia coli	Bacteria	RF02541	RNC in complex with a translocating SecYEG	Electron microscopy	3.33	2016-01-27
173	3JCE\|1\|A	Large subunit ribosomal RNA	23 ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	Electron microscopy	3.2	2016-01-13
174	7ACR\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Structure of post-translocated trans-translation complex on E. coli stalled ribosome.	Electron microscopy	3.44	2021-08-18
175	5MDY\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)	Electron microscopy	3.35	2016-12-21
176	5LZD\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)	Electron microscopy	3.4	2016-11-23
177	7D6Z\|1\|A	Large subunit ribosomal RNA	23S ribosomal rRNA	Escherichia coli	Bacteria	RF02541	Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor	Electron microscopy	3.4	2021-04-07
178	6ZTM\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-RNAP expressome complex in collided state without NusG	Electron microscopy	3.3	2020-09-16
179	5WE6\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA	Electron microscopy	3.4	2018-04-25
180	6I0Y\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel	Electron microscopy	3.2	2018-12-05
181	7NSP\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA	Electron microscopy	3.5	2021-08-11
182	7JT2\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	70S ribosome stalled on long mRNA with ArfB bound in the A site	Electron microscopy	3.5	2020-11-11
183	7K51\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)	Electron microscopy	3.5	2021-07-28
184	6X7F\|1\|a	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site	Electron microscopy	3.5	2020-09-02
185	6BU8\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome with S1 domains 1 and 2 (Class 1)	Electron microscopy	3.5	2018-01-31
186	5WFK\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)	Electron microscopy	3.4	2018-05-02
187	5O2R\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome	Electron microscopy	3.4	2017-07-26
188	5LZE\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)	Electron microscopy	3.5	2016-11-23
189	6ZTJ\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)	Electron microscopy	3.4	2020-09-16
190	5U4I\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	Electron microscopy	3.5	2017-01-11
191	6VWN\|1\|2	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)	Electron microscopy	3.4	2020-06-03
192	6VWM\|1\|2	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)	Electron microscopy	3.4	2020-06-03
193	7OJ0\|1\|a	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2	Electron microscopy	3.5	2021-09-15
194	5IQR\|1\|1	Large subunit ribosomal RNA	LSU rRNA	Escherichia coli	Bacteria	RF02541	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	2016-05-04
195	6OSQ\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	RF1 accommodated state bound Release complex 70S at long incubation time point	Electron microscopy	3.5	2019-06-26
196	7BL3\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	pre-50S-ObgE particle state 2	Electron microscopy	3.5	2021-05-12
197	6ORL\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	RF1 pre-accommodated 70S complex at 24 ms	Electron microscopy	3.5	2019-06-19
198	6ZTL\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-RNAP expressome complex in collided state bound to NusG	Electron microscopy	3.5	2020-09-16
199	6C4H\|1\|A	Large subunit ribosomal RNA	23S rRNA, P-site tRNA fMet	Escherichia coli	Bacteria	RF02541	Conformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region)	Electron microscopy	3.1	2018-02-21

Release history

Release	3.201
Date	2021-10-20

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_3.5_83717.83	NR_3.5_83717.82	3.201	(196) 4V6C\|1\|BA, 6PC6\|1\|I, 6XZ7\|1\|A, 5GAE\|1\|A, 4U24\|1\|BA, 5WE6\|1\|A, 7LV0\|1\|1, 4V85\|1\|BA, 6S0K\|1\|A, 6ZTO\|1\|BA, 5J8A\|1\|CA, 4V4Q\|1\|DB, 6I7V\|1\|CA, 7O1A\|1\|BA, 4V9P\|1\|EA, 6WDE\|1\|1, 5MDZ\|1\|1, 7BV8\|1\|A, 4V64\|1\|DB, 7O19\|1\|BA, 6WDD\|1\|1, 5MDY\|1\|1, 7K55\|1\|1, 6QUL\|1\|A, 6ZTM\|1\|BA, 5J88\|1\|DA, 4V4Q\|1\|BB, 6I0Y\|1\|A, 4V9P\|1\|CA, 6PC5\|1\|I, 6X7K\|1\|a, 5AFI\|1\|A, 4U20\|1\|DA, 5WE4\|1\|A, 4V7V\|1\|DA, 7BL5\|1\|A, 7NSQ\|1\|A, 6WD1\|1\|1, 5MDW\|1\|1, 4V64\|1\|BB, 7K54\|1\|1, 6QDW\|1\|b, 6ZTL\|1\|BA, 5J88\|1\|CA, 4V4H\|1\|DB, 6HRM\|1\|1, 4V9P\|1\|AA, 6X7F\|1\|a, 4YBB\|1\|DA, 4U20\|1\|BA, 5WDT\|1\|A, 4V7V\|1\|BA, 7BL4\|1\|A, 6OSQ\|1\|1, 7NSP\|1\|A, 6WD0\|1\|1, 7BL3\|1\|A, 5MDV\|1\|1, 4V57\|1\|DB, 7K53\|1\|1, 6PJ6\|1\|I, 6ZTJ\|1\|BA, 5J7L\|1\|DA, 4V4H\|1\|BB, 6H4N\|1\|A, 4V9O\|1\|GA, 6X6T\|1\|a, 4YBB\|1\|CA, 4U1V\|1\|DA, 5UYM\|1\|01, 4V7U\|1\|DA, 6ORL\|1\|1, 7NSO\|1\|A, 6VWN\|1\|2, 7B5K\|1\|A, 5LZE\|1\|A, 4V57\|1\|BB, 7K52\|1\|1, 6PCT\|1\|I, 6YST\|1\|A, 5J7L\|1\|CA, 4U27\|1\|DA, 6ENU\|1\|A, 4V9O\|1\|EA, 6WYV\|1\|I, 4WWW\|1\|YA, 4U1V\|1\|BA, 5U9G\|1\|01, 4V7U\|1\|BA, 6ORE\|1\|1, 7N31\|1\|23, 6VWM\|1\|2, 7ACR\|1\|1, 5LZD\|1\|A, 4V54\|1\|DB, 6OM6\|1\|1, 7K51\|1\|1, 6PCS\|1\|I,	(3) 7PJS\|1\|A, 7PJY\|1\|A, 7PJV\|1\|A	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_3.5_83717.83	NR_3.5_83717.84	3.202	(199) 6VWN\|1\|2, 4WF1\|1\|DA, 6XZB\|1\|A2, 5J7L\|1\|DA, 7B5K\|1\|A, 5NWY\|1\|N, 4U20\|1\|BA, 7N2C\|1\|23, 6H4N\|1\|A, 4V52\|1\|BB, 6PC8\|1\|I, 4V7V\|1\|BA, 6VWM\|1\|2, 4WF1\|1\|BA, 6XZA\|1\|A2, 5J7L\|1\|CA, 7ACR\|1\|1, 5MGP\|1\|A, 4U1V\|1\|DA, 7N1P\|1\|23, 6ENU\|1\|A, 4V50\|1\|DB, 7PJY\|1\|A, 6PC7\|1\|I, 4V7U\|1\|DA, 6VWL\|1\|2, 4V9P\|1\|GA, 6XZ7\|1\|A, 5J5B\|1\|DA, 7ACJ\|1\|1, 5MDZ\|1\|1, 4U1V\|1\|BA, 7LV0\|1\|1, 6ENF\|1\|A, 4V50\|1\|BB, 7PJV\|1\|A, 6PC6\|1\|I, 4V7U\|1\|BA, 6U48\|1\|CA, 4V9P\|1\|EA, 6X7K\|1\|a, 5J5B\|1\|CA, 7AC7\|1\|1, 5MDY\|1\|1, 4U1U\|1\|DA, 7K55\|1\|1, 6C4I\|1\|A, 4V4Q\|1\|DB, 7PJS\|1\|A, 6PC5\|1\|I, 4V7T\|1\|DA, 4V9P\|1\|CA, 6X7F\|1\|a, 5IT8\|1\|DA, 7ABZ\|1\|1, 5MDW\|1\|1, 4U1U\|1\|BA, 7K54\|1\|1, 6C4H\|1\|A, 4V4Q\|1\|BB, 7OJ0\|1\|a, 6OSQ\|1\|1, 4V7T\|1\|BA, 6TC3\|1\|23S1, 4V9P\|1\|AA, 6X6T\|1\|a, 5IT8\|1\|CA, 6ZU1\|1\|BA, 5MDV\|1\|1, 3JCE\|1\|A, 7K53\|1\|1, 6BU8\|1\|01, 4V4H\|1\|DB, 7OIZ\|1\|a, 6ORL\|1\|1, 4V7S\|1\|DA, 6TBV\|1\|23S1, 4V9O\|1\|GA, 6WYV\|1\|I, 5IQR\|1\|1, 6ZTP\|1\|BA, 5LZE\|1\|A, 3JBV\|1\|b, 7K52\|1\|1, 5WFS\|1\|A, 4V4H\|1\|BB, 7O1C\|1\|BA, 6ORE\|1\|1, 4V7S\|1\|BA, 6SZS\|1\|A, 4V9O\|1\|EA, 6WNW\|1\|4, 5H5U\|1\|A, 6ZTO\|1\|BA, 5LZD\|1\|A, 7K51\|1\|1, 5WFK\|1\|A, 4U27\|	(0)	(1) 7P3K\|1\|a

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	6HRM\|1\|1	E. coli 70S d2d8 stapled ribosome	ELECTRON MICROSCOPY	2.96	4417
2	6C4H\|1\|A	Conformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region)	ELECTRON MICROSCOPY	3.1	619
3	6YS3\|1\|b	Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide	ELECTRON MICROSCOPY	2.58	2888
4	6QDW\|1\|b	Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide	ELECTRON MICROSCOPY	2.83	2888
5	6WNV\|1\|4	70S ribosome without free 5S rRNA and with a perturbed PTC	ELECTRON MICROSCOPY	3.5	3025
6	6WNT\|1\|4	50S ribosomal subunit without free 5S rRNA and perturbed PTC	ELECTRON MICROSCOPY	3.1	3025
7	7BL3\|1\|A	pre-50S-ObgE particle state 2	ELECTRON MICROSCOPY	3.5	2902
8	7BL4\|1\|A	in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle	ELECTRON MICROSCOPY	2.4	2897
9	7BV8\|1\|A	Mature 50S ribosomal subunit from RrmJ knock out E.coli strain	ELECTRON MICROSCOPY	3.14	2900
10	7N1P\|1\|23	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	ELECTRON MICROSCOPY	2.33	2882
11	7NSQ\|1\|A	Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA	ELECTRON MICROSCOPY	3.1	2903
12	7NSP\|1\|A	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA	ELECTRON MICROSCOPY	3.5	2903
13	6WYV\|1\|I	E. coli 50S ribosome bound to compounds 47 and VS1	ELECTRON MICROSCOPY	2.75	2876
14	6PCH\|1\|I	E. coli 50S ribosome bound to compound 21	ELECTRON MICROSCOPY	2.9	2876
15	6PCT\|1\|I	E. coli 50S ribosome bound to compound 41q	ELECTRON MICROSCOPY	2.8	2876
16	6PC8\|1\|I	E. coli 50S ribosome bound to compound 40q	ELECTRON MICROSCOPY	2.9	2876
17	6PCQ\|1\|I	E. coli 50S ribosome bound to VM2	ELECTRON MICROSCOPY	2.6	2876
18	6PCR\|1\|I	E. coli 50S ribosome bound to compound 40o	ELECTRON MICROSCOPY	2.5	2876
19	6PC5\|1\|I	E. coli 50S ribosome bound to compounds 46 and VS1	ELECTRON MICROSCOPY	2.7	2876
20	6PC6\|1\|I	E. coli 50S ribosome bound to compound 47	ELECTRON MICROSCOPY	2.5	2876
21	6PCS\|1\|I	E. coli 50S ribosome bound to compound 40e	ELECTRON MICROSCOPY	2.8	2876
22	6PC7\|1\|I	E. coli 50S ribosome bound to compound 46	ELECTRON MICROSCOPY	2.5	2876
23	6PJ6\|1\|I	High resolution cryo-EM structure of E.coli 50S	ELECTRON MICROSCOPY	2.2	2874
24	6U48\|1\|CA	E. coli 50S with phazolicin (PHZ) bound in exit tunnel	ELECTRON MICROSCOPY	2.87	2875
25	5J88\|1\|CA	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	2876
26	5IT8\|1\|CA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	3.12	2876
27	5J91\|1\|CA	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	2876
28	5J5B\|1\|CA	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	2876
29	5J8A\|1\|CA	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	2876
30	5J7L\|1\|CA	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	2875
31	5JC9\|1\|CA	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	2876
32	4YBB\|1\|CA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	2876
33	6I7V\|1\|CA	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	2898
34	4U24\|1\|DA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	2897
35	4U26\|1\|DA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	2897
36	4U25\|1\|DA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	2897
37	4U27\|1\|DA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	2897
38	4WF1\|1\|DA	Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	2897
39	4U1V\|1\|DA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	2897
40	4U20\|1\|DA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	2897
41	4U1U\|1\|DA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	2897
42	4V9D\|1\|DA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	2896
43	4V9C\|1\|BA	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	2897
44	4WOI\|1\|CA	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	2897
45	4V7U\|1\|DA	Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	2841
46	4V6C\|1\|DA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	2841
47	4V7T\|1\|DA	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	2841
48	4V7V\|1\|DA	Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	2841
49	4V7S\|1\|DA	Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	2841
50	4WWW\|1\|YA	Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	2841
51	4V57\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	2841
52	4V52\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	2841
53	4V64\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	2841
54	4V54\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	2841
55	4V4H\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	2841
56	4V4Q\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	2841
57	4V50\|1\|DB	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	2841
58	6XZ7\|1\|A	E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).	ELECTRON MICROSCOPY	2.1	2876
59	6XZB\|1\|A2	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.54	2878
60	6XZA\|1\|A2	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.66	2878
61	5J88\|1\|DA	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	2886
62	5JC9\|1\|DA	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	2886
63	5IT8\|1\|DA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	3.12	2886
64	5J8A\|1\|DA	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	2886
65	5J7L\|1\|DA	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	2886
66	5J91\|1\|DA	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	2886
67	5J5B\|1\|DA	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	2886
68	4YBB\|1\|DA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	2883
69	6I7V\|1\|DA	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	2875
70	4V7S\|1\|BA	Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	2854
71	4WWW\|1\|RA	Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	2854
72	4V6C\|1\|BA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	2854
73	4V7T\|1\|BA	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	2854
74	4V7U\|1\|BA	Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	2854
75	4V7V\|1\|BA	Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	2854
76	4V9P\|1\|EA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
77	4V9O\|1\|EA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
78	4V9O\|1\|GA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
79	4V9P\|1\|GA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
80	4V9P\|1\|CA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
81	4V9O\|1\|CA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
82	4V9P\|1\|AA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
83	4V9O\|1\|AA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
84	6I0Y\|1\|A	TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel	ELECTRON MICROSCOPY	3.2	2854
85	6LKQ\|1\|t	The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin	X-RAY DIFFRACTION	3.1	2850
86	4V85\|1\|BA	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-RAY DIFFRACTION	3.2	2853
87	7PJS\|1\|A	Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)	ELECTRON MICROSCOPY	2.35	2880
88	6YSS\|1\|A	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	ELECTRON MICROSCOPY	2.6	2880
89	6YSR\|1\|A	Structure of the P+9 stalled ribosome complex	ELECTRON MICROSCOPY	3.1	2880
90	4V50\|1\|BB	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	2841
91	4V4Q\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	2841
92	4V4H\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	2841
93	4V52\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	2841
94	4V57\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	2841
95	4V64\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	2841
96	4V54\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	2841
97	7ACR\|1\|1	Structure of post-translocated trans-translation complex on E. coli stalled ribosome.	ELECTRON MICROSCOPY	3.44	2881
98	7ACJ\|1\|1	Structure of translocated trans-translation complex on E. coli stalled ribosome.	ELECTRON MICROSCOPY	3.2	2881
99	5NWY\|1\|N	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	ELECTRON MICROSCOPY	2.9	2898
100	6OSQ\|1\|1	RF1 accommodated state bound Release complex 70S at long incubation time point	ELECTRON MICROSCOPY	3.5	2881
101	6ORE\|1\|1	Release complex 70S	ELECTRON MICROSCOPY	2.9	2881
102	6X6T\|1\|a	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site	ELECTRON MICROSCOPY	3.2	2880
103	6X7F\|1\|a	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site	ELECTRON MICROSCOPY	3.5	2880
104	6X7K\|1\|a	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site	ELECTRON MICROSCOPY	3.1	2880
105	5MDZ\|1\|1	Structure of the 70S ribosome (empty A site)	ELECTRON MICROSCOPY	3.1	2881
106	5MDW\|1\|1	Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)	ELECTRON MICROSCOPY	3.06	2881
107	5MDV\|1\|1	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	ELECTRON MICROSCOPY	2.97	2881
108	6C4I\|1\|A	Conformation of methylated GGQ in the peptidyl transferase center during translation termination	ELECTRON MICROSCOPY	3.24	2882
109	5IQR\|1\|1	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	2882
110	5U4I\|1\|A	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	ELECTRON MICROSCOPY	3.5	2887
111	6ORL\|1\|1	RF1 pre-accommodated 70S complex at 24 ms	ELECTRON MICROSCOPY	3.5	2881
112	6OM6\|1\|1	Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA	ELECTRON MICROSCOPY	3.1	2883
113	5MDY\|1\|1	Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)	ELECTRON MICROSCOPY	3.35	2881
114	6S0K\|1\|A	Ribosome nascent chain in complex with SecA	ELECTRON MICROSCOPY	3.1	2883
115	6QUL\|1\|A	Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid	ELECTRON MICROSCOPY	3	2799
116	6ZTM\|1\|BA	E. coli 70S-RNAP expressome complex in collided state without NusG	ELECTRON MICROSCOPY	3.3	2877
117	6ZTJ\|1\|BA	E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)	ELECTRON MICROSCOPY	3.4	2876
118	6ZTL\|1\|BA	E. coli 70S-RNAP expressome complex in collided state bound to NusG	ELECTRON MICROSCOPY	3.5	2875
119	6ZU1\|1\|BA	E. coli 70S-RNAP expressome complex in uncoupled state 2	ELECTRON MICROSCOPY	3	2876
120	6ZTO\|1\|BA	E. coli 70S-RNAP expressome complex in uncoupled state 1	ELECTRON MICROSCOPY	3	2876
121	6ZTP\|1\|BA	E. coli 70S-RNAP expressome complex in uncoupled state 6	ELECTRON MICROSCOPY	3	2876
122	7K00\|1\|a	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	ELECTRON MICROSCOPY	1.98	2729
123	7OJ0\|1\|a	Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2	ELECTRON MICROSCOPY	3.5	2784
124	7OIZ\|1\|a	Cryo-EM structure of 70S ribosome stalled with TnaC peptide	ELECTRON MICROSCOPY	2.9	2730
125	7AC7\|1\|1	Structure of accomodated trans-translation complex on E. Coli stalled ribosome.	ELECTRON MICROSCOPY	3.08	2881
126	7O1C\|1\|BA	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.6	2874
127	7O19\|1\|BA	Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.9	2874
128	7O1A\|1\|BA	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.4	2874
129	6TC3\|1\|23S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	ELECTRON MICROSCOPY	2.7	2874
130	6TBV\|1\|23S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	ELECTRON MICROSCOPY	2.7	2874
131	7B5K\|1\|A	E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.	ELECTRON MICROSCOPY	2.9	2874
132	7D6Z\|1\|A	Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor	ELECTRON MICROSCOPY	3.4	2903
133	5H5U\|1\|A	Mechanistic insights into the alternative translation termination by ArfA and RF2	ELECTRON MICROSCOPY	3.01	2902
134	5WE6\|1\|A	70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA	ELECTRON MICROSCOPY	3.4	2876
135	5WFK\|1\|A	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)	ELECTRON MICROSCOPY	3.4	2876
136	5WDT\|1\|A	70S ribosome-EF-Tu H84A complex with GppNHp	ELECTRON MICROSCOPY	3	2876
137	5WE4\|1\|A	70S ribosome-EF-Tu wt complex with GppNHp	ELECTRON MICROSCOPY	3.1	2876
138	5WFS\|1\|A	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	ELECTRON MICROSCOPY	3	2876
139	5U9G\|1\|01	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)	ELECTRON MICROSCOPY	3.2	2903
140	5U9F\|1\|01	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)	ELECTRON MICROSCOPY	3.2	2903
141	5O2R\|1\|A	Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome	ELECTRON MICROSCOPY	3.4	2900
142	5AFI\|1\|A	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	2876
143	5UYM\|1\|01	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	ELECTRON MICROSCOPY	3.2	2903
144	5MGP\|1\|A	Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs	ELECTRON MICROSCOPY	3.1	2900
145	6Y69\|1\|A	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	ELECTRON MICROSCOPY	2.86	2887
146	6H4N\|1\|A	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	ELECTRON MICROSCOPY	3	2900
147	7K50\|1\|1	Pre-translocation non-frameshifting(CCA-A) complex (Structure I)	ELECTRON MICROSCOPY	3.4	2903
148	7K53\|1\|1	Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)	ELECTRON MICROSCOPY	3.2	2903
149	7K54\|1\|1	Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)	ELECTRON MICROSCOPY	3.2	2903
150	7K52\|1\|1	Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)	ELECTRON MICROSCOPY	3.4	2903
151	7K55\|1\|1	Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)	ELECTRON MICROSCOPY	3.3	2903
152	7K51\|1\|1	Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)	ELECTRON MICROSCOPY	3.5	2903
153	6BU8\|1\|01	70S ribosome with S1 domains 1 and 2 (Class 1)	ELECTRON MICROSCOPY	3.5	2903
154	6WDD\|1\|1	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)	ELECTRON MICROSCOPY	3.2	2903
155	6WDE\|1\|1	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	ELECTRON MICROSCOPY	3	2903
156	6WD0\|1\|1	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	ELECTRON MICROSCOPY	3	2903
157	6WNW\|1\|4	Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA	ELECTRON MICROSCOPY	3.2	3031
158	5LZE\|1\|A	Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)	ELECTRON MICROSCOPY	3.5	2876
159	5LZD\|1\|A	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)	ELECTRON MICROSCOPY	3.4	2879
160	7JT1\|1\|1	70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)	ELECTRON MICROSCOPY	3.3	2903
161	7JT2\|1\|1	70S ribosome stalled on long mRNA with ArfB bound in the A site	ELECTRON MICROSCOPY	3.5	2903
162	6SZS\|1\|A	Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis	ELECTRON MICROSCOPY	3.06	2903
163	7NSO\|1\|A	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA	ELECTRON MICROSCOPY	2.9	2903
164	7N31\|1\|23	Elongating 70S ribosome complex in a post-translocation (POST) conformation	ELECTRON MICROSCOPY	2.69	2882
165	3JCE\|1\|A	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	ELECTRON MICROSCOPY	3.2	2903
166	7ABZ\|1\|1	Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.	ELECTRON MICROSCOPY	3.21	2882
167	5GAE\|1\|A	RNC in complex with a translocating SecYEG	ELECTRON MICROSCOPY	3.33	2884
168	6VWN\|1\|2	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)	ELECTRON MICROSCOPY	3.4	2833
169	6VWM\|1\|2	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)	ELECTRON MICROSCOPY	3.4	2833
170	6OG7\|1\|1	70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)	ELECTRON MICROSCOPY	3.3	2903
171	6OFX\|1\|1	Non-rotated ribosome (Structure I)	ELECTRON MICROSCOPY	3.3	2903
172	6OGI\|1\|1	70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)	ELECTRON MICROSCOPY	3.4	2903
173	6YST\|1\|A	Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state	ELECTRON MICROSCOPY	3.2	2880
174	7PJY\|1\|A	Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)	ELECTRON MICROSCOPY	3.1	2880
175	7N2C\|1\|23	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	ELECTRON MICROSCOPY	2.72	2879
176	7N2V\|1\|23	Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)	ELECTRON MICROSCOPY	2.54	2881
177	7N2U\|1\|23	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	ELECTRON MICROSCOPY	2.53	2880
178	7PJV\|1\|A	Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)	ELECTRON MICROSCOPY	3.1	2880
179	7N30\|1\|23	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	ELECTRON MICROSCOPY	2.66	2879
180	7LV0\|1\|1	Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)	ELECTRON MICROSCOPY	3.2	2903
181	6WD1\|1\|1	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)	ELECTRON MICROSCOPY	3.3	2903
182	6WDG\|1\|1	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)	ELECTRON MICROSCOPY	3.3	2903
183	6WDF\|1\|1	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)	ELECTRON MICROSCOPY	3.3	2903
184	4U24\|1\|BA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	2897
185	4U26\|1\|BA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	2897
186	4WF1\|1\|BA	Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	2897
187	4U25\|1\|BA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	2897
188	4U27\|1\|BA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	2897
189	4U1V\|1\|BA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	2897
190	4U20\|1\|BA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	2897
191	4U1U\|1\|BA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	2897
192	4V9D\|1\|CA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	2897
193	4V9C\|1\|DA	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	2897
194	4WOI\|1\|BA	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	2897
195	6ENU\|1\|A	Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)	ELECTRON MICROSCOPY	3.1	2871
196	6ENF\|1\|A	Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P	ELECTRON MICROSCOPY	3.2	2807
197	6VWL\|1\|2	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)	ELECTRON MICROSCOPY	3.1	2833
198	3JBV\|1\|b	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	ELECTRON MICROSCOPY	3.32	2903
199	7BL5\|1\|A	pre-50S-ObgE particle	ELECTRON MICROSCOPY	3.3	2913

Equivalence class NR_3.5_83717.83 Obsolete

Release history

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