Equivalence class NR_3.5_88517.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4JNG|1|L (rep) | RNA (42-MER) | Schmallenberg virus nucleoprotein-RNA complex | X-ray diffraction | 2.12 | 2013-07-31 | ||||
| 2 | 5UK4|1|x | RNA (45-MER) | Vicugna pacos | Eukarya | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | ||
| 3 | 5UK4|1|v | RNA (45-MER) | Vicugna pacos | Eukarya | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | ||
| 4 | 5UK4|1|w | RNA (45-MER) | Vicugna pacos | Eukarya | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | ||
| 5 | 5UK4|1|u | RNA (45-MER) | Vicugna pacos | Eukarya | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | ||
| 6 | 4BHH|1|R | POLY-URIDINE 45-MER | synthetic construct | Synthetic | Crystal structure of tetramer of La Crosse virus nucleoprotein in complex with ssRNA | X-ray diffraction | 3.4 | 2013-04-24 | ||
| 7 | 4J1G|1|E | RNA (45-MER) | Leanyer orthobunyavirus nucleoprotein-ssRNA complex | X-ray diffraction | 2.79 | 2013-04-10 | ||||
| 8 | 3ZLA|1|I | RNA | Escherichia coli | Bacteria | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-ray diffraction | 3.2 | 2013-05-01 | ||
| 9 | 3ZLA|1|J | RNA | Escherichia coli | Bacteria | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-ray diffraction | 3.2 | 2013-05-01 | ||
| 10 | 3PU4|1|R | RNA (45-MER) | synthetic construct | Synthetic | Crystal Structure of a vesicular stomatitis virus nucleocapsid-polyU complex | X-ray diffraction | 3 | 2011-01-12 | ||
| 11 | 2GIC|1|R | 45-MER | Crystal Structure of a vesicular stomatitis virus nucleocapsid-RNA complex | X-ray diffraction | 2.92 | 2006-08-22 | ||||
| 12 | 3HHZ|1|R | RNA (45-MER) | Escherichia coli | Bacteria | Complex of the vesicular stomatitis virus nucleocapsid and the nucleocapsid-binding domain of the phosphoprotein | X-ray diffraction | 3.5 | 2009-07-28 |
Release history
| Release | 2.124 | 2.125 | 2.126 | 2.127 | 2.128 | 2.129 | 2.130 | 2.131 | 2.132 | 2.133 | 2.134 | 2.135 | 2.136 | 2.137 | 2.138 | 2.139 | 2.140 | 2.141 | 2.142 | 2.143 | 2.144 | 2.145 | 2.146 | 2.147 | 2.148 | 2.149 | 2.150 | 2.151 | 2.152 | 2.153 | 2.154 | 2.155 | 2.156 | 2.157 | 2.158 | 3.0 | 3.1 | 3.2 | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2017-04-26 | 2017-04-29 | 2017-05-09 | 2017-05-15 | 2017-05-20 | 2017-05-27 | 2017-06-07 | 2017-06-11 | 2017-06-21 | 2017-06-24 | 2017-06-28 | 2017-07-04 | 2017-07-10 | 2017-07-15 | 2017-07-26 | 2017-07-31 | 2017-08-05 | 2017-08-12 | 2017-08-19 | 2017-08-26 | 2017-09-03 | 2017-09-09 | 2017-09-16 | 2017-09-23 | 2017-09-30 | 2017-10-07 | 2017-10-14 | 2017-10-21 | 2017-10-28 | 2017-11-03 | 2017-11-10 | 2017-11-17 | 2017-11-24 | 2017-12-01 | 2017-12-08 | 2017-12-15 | 2017-12-22 | 2017-12-29 | 2018-01-05 | 2018-01-12 | 2018-01-19 | 2018-01-26 | 2018-02-02 | 2018-02-09 | 2018-02-16 | 2018-02-23 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5UK4|1|u | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 |
| 2 | 5UK4|1|v | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 |
| 3 | 5UK4|1|w | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 |
| 4 | 5UK4|1|x | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 |
| 5 | 3PU4|1|R | Crystal Structure of a vesicular stomatitis virus nucleocapsid-polyU complex | X-RAY DIFFRACTION | 3 | 45 |
| 6 | 3HHZ|1|R | Complex of the vesicular stomatitis virus nucleocapsid and the nucleocapsid-binding domain of the phosphoprotein | X-RAY DIFFRACTION | 3.5 | 45 |
| 7 | 2GIC|1|R | Crystal Structure of a vesicular stomatitis virus nucleocapsid-RNA complex | X-RAY DIFFRACTION | 2.92 | 45 |
| 8 | 4JNG|1|L | Schmallenberg virus nucleoprotein-RNA complex | X-RAY DIFFRACTION | 2.12 | 42 |
| 9 | 3ZLA|1|J | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-RAY DIFFRACTION | 3.2 | 44 |
| 10 | 3ZLA|1|I | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-RAY DIFFRACTION | 3.2 | 44 |
| 11 | 4J1G|1|E | Leanyer orthobunyavirus nucleoprotein-ssRNA complex | X-RAY DIFFRACTION | 2.79 | 45 |
| 12 | 4BHH|1|R | Crystal structure of tetramer of La Crosse virus nucleoprotein in complex with ssRNA | X-RAY DIFFRACTION | 3.4 | 44 |