Equivalence class NR_3.5_90759.4 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6QDV|1|2+ 6QDV|1|6 (rep) | U2 splicesomal small nuclear RNA + U6 spliceosomal RNA | U2 snRNA, U6 snRNA, Intron lariat: MINX RNA | Homo sapiens | Eukarya | RF00004 + RF00026 | Human post-catalytic P complex spliceosome | Electron microscopy | 3.3 | 2019-02-20 |
| 2 | 6ICZ|1|H+ 6ICZ|1|F | U2 splicesomal small nuclear RNA + U6 spliceosomal RNA | U2snRNA, U6snRNA, pre-mRNA | Homo sapiens | Eukarya | RF00004 + RF00026 | Cryo-EM structure of a human post-catalytic spliceosome (P complex) at 3.0 angstrom | Electron microscopy | 3 | 2019-03-13 |
| 3 | 6QX9|1|2 | U2 splicesomal small nuclear RNA | U2 snRNA, U6 snRNA, AdML pre-mRNA | Homo sapiens | Eukarya | RF00004 | Structure of a human fully-assembled precatalytic spliceosome (pre-B complex). | Electron microscopy | 3.28 | 2019-04-17 |
| 4 | 6ID1|1|H+ 6ID1|1|F | U2 splicesomal small nuclear RNA + U6 spliceosomal RNA | U2snRNA, U6snRNA, pre-mRNA | Homo sapiens | Eukarya | RF00004 + RF00026 | Cryo-EM structure of a human intron lariat spliceosome after Prp43 loaded (ILS2 complex) at 2.9 angstrom resolution | Electron microscopy | 2.86 | 2019-03-13 |
Release history
| Release | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-04-19 | 2019-04-26 | 2019-05-03 | 2019-05-10 | 2019-05-17 | 2019-05-24 | 2019-05-31 | 2019-06-07 | 2019-06-14 | 2019-06-21 | 2019-06-28 | 2019-07-05 | 2019-07-12 | 2019-07-19 | 2019-07-26 | 2019-08-02 | 2019-08-09 | 2019-08-16 | 2019-08-23 | 2019-08-28 | 2019-09-04 | 2019-09-11 | 2019-09-19 | 2019-09-25 | 2019-10-03 | 2019-10-09 | 2019-10-16 | 2019-10-23 | 2019-10-30 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.5_90759.4 | NR_3.5_90759.3 | 3.70 | (3) 6QDV|1|2+6QDV|1|6, 6ID1|1|H+6ID1|1|F, 6ICZ|1|H+6ICZ|1|F | (1) 6QX9|1|2 | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_3.5_90759.4 | NR_3.5_25259.1 | 3.99 | (1) 6QX9|1|2 | (3) 6ID1|1|H+6ID1|1|F, 6ICZ|1|H+6ICZ|1|F, 6QDV|1|2+6QDV|1|6 | (0) |
| NR_3.5_90759.4 | NR_3.5_38699.1 | 3.99 | (2) 6ICZ|1|H+6ICZ|1|F, 6QDV|1|2+6QDV|1|6 | (2) 6QX9|1|2, 6ID1|1|H+6ID1|1|F | (0) |
| NR_3.5_90759.4 | NR_3.5_81267.1 | 3.99 | (1) 6ID1|1|H+6ID1|1|F | (3) 6QDV|1|2+6QDV|1|6, 6ICZ|1|H+6ICZ|1|F, 6QX9|1|2 | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6QDV|1|2+6QDV|1|6 | Human post-catalytic P complex spliceosome | ELECTRON MICROSCOPY | 3.3 | 120 |
| 2 | 6ICZ|1|H+6ICZ|1|F | Cryo-EM structure of a human post-catalytic spliceosome (P complex) at 3.0 angstrom | ELECTRON MICROSCOPY | 3 | 140 |
| 3 | 6ID1|1|H+6ID1|1|F | Cryo-EM structure of a human intron lariat spliceosome after Prp43 loaded (ILS2 complex) at 2.9 angstrom resolution | ELECTRON MICROSCOPY | 2.86 | 136 |
| 4 | 6QX9|1|2 | Structure of a human fully-assembled precatalytic spliceosome (pre-B complex). | ELECTRON MICROSCOPY | 3.28 | 94 |