Equivalence class NR_3.5_90795.6 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6KQE|1|I (rep) | RNA (5'-R(*UP*CP*GP*A)-3') | synthetic construct | Thermus thermophilus initial transcription complex comprising sigma A and 5'-OH RNA of 4 nt | X-ray diffraction | 3.3 | 2020-03-11 | |||
| 2 | 5VI5|1|Q | RNA (5'-R(*UP*CP*GP*A)-3') | synthetic construct | Structure of Mycobacterium smegmatis transcription initiation complex with a full transcription bubble | X-ray diffraction | 3.2 | 2017-07-26 | |||
| 3 | 8GZG|1|3 | RNA (5'-R(*UP*CP*GP*A)-3') | synthetic construct | Cryo-EM structure of Synechocystis sp. PCC 6803 RPitc | Electron microscopy | 3.13 | 2023-04-19 |
Release history
| Release | 3.279 | 3.280 | 3.281 | 3.282 | 3.283 | 3.284 | 3.285 | 3.286 | 3.287 | 3.288 | 3.289 | 3.290 | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 | 3.303 | 3.304 | 3.305 | 3.306 | 3.307 | 3.308 | 3.309 | 3.310 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-04-19 | 2023-04-26 | 2023-05-03 | 2023-05-10 | 2023-05-17 | 2023-05-24 | 2023-05-31 | 2023-06-07 | 2023-06-14 | 2023-06-21 | 2023-06-28 | 2023-07-05 | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 | 2023-10-04 | 2023-10-11 | 2023-10-18 | 2023-10-25 | 2023-11-01 | 2023-11-08 | 2023-11-15 | 2023-11-22 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.5_90795.6 | NR_3.5_90795.5 | 3.279 | (2) 6KQE|1|I, 5VI5|1|Q | (1) 8GZG|1|3 | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6KQE|1|I | Thermus thermophilus initial transcription complex comprising sigma A and 5'-OH RNA of 4 nt | X-RAY DIFFRACTION | 3.3 | 4 |
| 2 | 8GZG|1|3 | Cryo-EM structure of Synechocystis sp. PCC 6803 RPitc | ELECTRON MICROSCOPY | 3.13 | 4 |
| 3 | 5VI5|1|Q | Structure of Mycobacterium smegmatis transcription initiation complex with a full transcription bubble | X-RAY DIFFRACTION | 3.2 | 4 |