NR_4.0_03510.19

Members (80)
History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	4V88\|1\|A6 (rep)	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-ray diffraction	3	2014-07-09
2	5TBW\|1\|sR	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-ray diffraction	3	2017-07-26
3	4V88\|1\|A2	Small subunit ribosomal RNA	18S RIBOSOMAL RNA	Saccharomyces cerevisiae	Eukarya	RF01960	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-ray diffraction	3	2014-07-09
4	5TBW\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-ray diffraction	3	2017-07-26
5	5OBM\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-ray diffraction	3.4	2017-12-13
6	5I4L\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-ray diffraction	3.1	2016-06-22
7	5MEI\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Agelastatin A bound to the 80S ribosome	X-ray diffraction	3.5	2017-06-28
8	5NDW\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-ray diffraction	3.7	2017-12-13
9	5LYB\|1\|6	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	2016-11-23
10	5I4L\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-ray diffraction	3.1	2016-06-22
11	5OBM\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-ray diffraction	3.4	2017-12-13
12	5MEI\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Agelastatin A bound to the 80S ribosome	X-ray diffraction	3.5	2017-06-28
13	5ON6\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of haemanthamine bound to the 80S ribosome	X-ray diffraction	3.1	2018-02-28
14	5NDW\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-ray diffraction	3.7	2017-12-13
15	5LYB\|1\|2	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	2016-11-23
16	5NDV\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-ray diffraction	3.3	2017-12-13
17	5NDV\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-ray diffraction	3.3	2017-12-13
18	5ON6\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of haemanthamine bound to the 80S ribosome	X-ray diffraction	3.1	2018-02-28
19	5NDG\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-ray diffraction	3.7	2017-12-13
20	5NDG\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-ray diffraction	3.7	2017-12-13
21	5TGM\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.5	2017-01-18
22	5TGM\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.5	2017-01-18
23	4V7R\|1\|A1	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Yeast 80S ribosome.	X-ray diffraction	4	2014-07-09
24	4V7R\|1\|C1	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Yeast 80S ribosome.	X-ray diffraction	4	2014-07-09
25	5DAT\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-ray diffraction	3.15	2016-08-31
26	5TGA\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.3	2016-11-23
27	5DGE\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-ray diffraction	3.45	2017-01-25
28	5DGV\|1\|6	Small subunit ribosomal RNA	Saccharomyces cerevisiae S288c RDN37-1 miscRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.1	2016-12-14
29	5DGF\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.3	2016-12-14
30	5DC3\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with non-modified eIF5A	X-ray diffraction	3.25	2016-06-01
31	5DAT\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-ray diffraction	3.15	2016-08-31
32	5TGA\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.3	2016-11-23
33	5DGV\|1\|2	Small subunit ribosomal RNA	Saccharomyces cerevisiae S288c RDN37-1 miscRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.1	2016-12-14
34	5DGE\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-ray diffraction	3.45	2017-01-25
35	5DGF\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.3	2016-12-14
36	5DC3\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with non-modified eIF5A	X-ray diffraction	3.25	2016-06-01
37	4U4R\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-ray diffraction	2.8	2014-10-22
38	4U4R\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-ray diffraction	2.8	2014-10-22
39	4U3U\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-ray diffraction	2.9	2014-10-22
40	4U3U\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-ray diffraction	2.9	2014-10-22
41	4U3M\|1\|6	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
42	4U4Q\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
43	4U4U\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
44	4U52\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
45	4U3M\|1\|2	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
46	4U52\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
47	4U4U\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
48	4U6F\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
49	4U4Q\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
50	4U4N\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Edeine bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
51	4U6F\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
52	4U4Z\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
53	4U4Y\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
54	4U3N\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
55	4U4Z\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
56	4U55\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
57	5M1J\|1\|22	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Nonstop ribosomal complex bound with Dom34 and Hbs1	Electron microscopy	3.3	2017-01-18
58	4U4N\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Edeine bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
59	4U50\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
60	4U51\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
61	4U3N\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
62	4U4Y\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
63	4U51\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
64	4U55\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
65	6FAI\|1\|2	Small subunit ribosomal RNA	20S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit	Electron microscopy	3.4	2018-02-28
66	4U50\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
67	5JUP\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	Electron microscopy	3.5	2016-10-05
68	4U53\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-ray diffraction	3.3	2014-10-22
69	4U53\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-ray diffraction	3.3	2014-10-22
70	4U56\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-ray diffraction	3.45	2014-10-22
71	4U56\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-ray diffraction	3.45	2014-10-22
72	5MC6\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae	Electron microscopy	3.8	2017-01-18
73	6EML\|1\|2	Small subunit ribosomal RNA	pre-18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Cryo-EM structure of a late pre-40S ribosomal subunit from Saccharomyces cerevisiae	Electron microscopy	3.6	2017-11-29
74	5JUO\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)	Electron microscopy	4	2016-10-05
75	5JUT\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)	Electron microscopy	4	2016-10-05
76	5JUU\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)	Electron microscopy	4	2016-10-05
77	4U4O\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-ray diffraction	3.6	2014-10-22
78	4U4O\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-ray diffraction	3.6	2014-10-22
79	5LL6\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation	Electron microscopy	3.9	2017-04-12
80	5WLC\|1\|L1+ 5WLC\|1\|L0+ 5WLC\|1\|L2	Small subunit ribosomal RNA + U3 small nucleolar RNA	18S pre-rRNA, 5' ETS, U3 snoRNA	Saccharomyces cerevisiae	Eukarya	RF01960 + RF01846	The complete structure of the small subunit processome	Electron microscopy	3.8	2017-09-27

Release history

Release	3.11	3.12	3.13	3.14	3.15	3.16	3.17	3.18	3.19	3.20	3.21	3.22	3.23	3.24	3.25	3.26	3.27	3.28	3.29
Date	2018-03-01	2018-03-08	2018-03-15	2018-03-22	2018-03-29	2018-04-06	2018-04-13	2018-04-20	2018-04-27	2018-05-04	2018-05-11	2018-05-18	2018-05-25	2018-06-01	2018-06-08	2018-06-15	2018-06-22	2018-06-29	2018-07-06

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_4.0_03510.19	NR_4.0_03510.18	3.11	(77) 4U3M\|1\|2, 4U3M\|1\|6, 4U3N\|1\|2, 4U3N\|1\|6, 4U3U\|1\|2, 4U3U\|1\|6, 4U4N\|1\|2, 4U4N\|1\|6, 4U4O\|1\|2, 4U4O\|1\|6, 4U4Q\|1\|2, 4U4Q\|1\|6, 4U4R\|1\|2, 4U4R\|1\|6, 4U4U\|1\|2, 4U4U\|1\|6, 4U4Y\|1\|2, 4U4Y\|1\|6, 4U4Z\|1\|2, 4U4Z\|1\|6, 4U50\|1\|2, 4U50\|1\|6, 4U51\|1\|2, 4U51\|1\|6, 4U52\|1\|2, 4U52\|1\|6, 4U53\|1\|2, 4U53\|1\|6, 4U55\|1\|2, 4U55\|1\|6, 4U56\|1\|2, 4U56\|1\|6, 4U6F\|1\|2, 4U6F\|1\|6, 4V7R\|1\|A1, 4V7R\|1\|C1, 4V88\|1\|A2, 4V88\|1\|A6, 5DAT\|1\|2, 5DAT\|1\|6, 5DC3\|1\|2, 5DC3\|1\|6, 5DGE\|1\|2, 5DGE\|1\|6, 5DGF\|1\|2, 5DGF\|1\|6, 5DGV\|1\|2, 5DGV\|1\|6, 5I4L\|1\|2, 5I4L\|1\|6, 5JUO\|1\|A, 5JUP\|1\|A, 5JUT\|1\|A, 5JUU\|1\|A, 5LL6\|1\|2, 5LYB\|1\|2, 5LYB\|1\|6, 5M1J\|1\|22, 5MC6\|1\|2, 5MEI\|1\|6, 5MEI\|1\|A, 5NDG\|1\|2, 5NDG\|1\|6, 5NDV\|1\|2, 5NDV\|1\|6, 5NDW\|1\|2, 5NDW\|1\|6, 5OBM\|1\|2, 5OBM\|1\|6, 5TBW\|1\|A, 5TBW\|1\|sR, 5TGA\|1\|2, 5TGA\|1\|6, 5TGM\|1\|2, 5TGM\|1\|6, 5WLC\|1\|L1+5WLC\|1\|L0+5WLC\|1\|L2, 6EML\|1\|2	(3) 5ON6\|1\|6, 5ON6\|1\|A, 6FAI\|1\|2	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_4.0_03510.19	NR_4.0_03510.20	3.30	(80) 4U3M\|1\|2, 4U3M\|1\|6, 4U3N\|1\|2, 4U3N\|1\|6, 4U3U\|1\|2, 4U3U\|1\|6, 4U4N\|1\|2, 4U4N\|1\|6, 4U4O\|1\|2, 4U4O\|1\|6, 4U4Q\|1\|2, 4U4Q\|1\|6, 4U4R\|1\|2, 4U4R\|1\|6, 4U4U\|1\|2, 4U4U\|1\|6, 4U4Y\|1\|2, 4U4Y\|1\|6, 4U4Z\|1\|2, 4U4Z\|1\|6, 4U50\|1\|2, 4U50\|1\|6, 4U51\|1\|2, 4U51\|1\|6, 4U52\|1\|2, 4U52\|1\|6, 4U53\|1\|2, 4U53\|1\|6, 4U55\|1\|2, 4U55\|1\|6, 4U56\|1\|2, 4U56\|1\|6, 4U6F\|1\|2, 4U6F\|1\|6, 4V7R\|1\|A1, 4V7R\|1\|C1, 4V88\|1\|A2, 4V88\|1\|A6, 5DAT\|1\|2, 5DAT\|1\|6, 5DC3\|1\|2, 5DC3\|1\|6, 5DGE\|1\|2, 5DGE\|1\|6, 5DGF\|1\|2, 5DGF\|1\|6, 5DGV\|1\|2, 5DGV\|1\|6, 5I4L\|1\|2, 5I4L\|1\|6, 5JUO\|1\|A, 5JUP\|1\|A, 5JUT\|1\|A, 5JUU\|1\|A, 5LL6\|1\|2, 5LYB\|1\|2, 5LYB\|1\|6, 5M1J\|1\|22, 5MC6\|1\|2, 5MEI\|1\|6, 5MEI\|1\|A, 5NDG\|1\|2, 5NDG\|1\|6, 5NDV\|1\|2, 5NDV\|1\|6, 5NDW\|1\|2, 5NDW\|1\|6, 5OBM\|1\|2, 5OBM\|1\|6, 5ON6\|1\|6, 5ON6\|1\|A, 5TBW\|1\|A, 5TBW\|1\|sR, 5TGA\|1\|2, 5TGA\|1\|6, 5TGM\|1\|2, 5TGM\|1\|6, 5WLC\|1\|L1+5WLC\|1\|L0+5WLC\|1\|L2, 6EML\|1\|2, 6FAI\|1\|2	(0)	(2) 6GQB\|1\|2, 6GQV\|1\|2

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	Length
1	4V7R\|1\|C1	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	1789
2	5NDG\|1\|6	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	1700
3	5NDW\|1\|6	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	1736
4	5OBM\|1\|6	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	1739
5	4U4O\|1\|6	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	1791
6	4U53\|1\|6	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	1795
7	4U50\|1\|6	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
8	4U52\|1\|6	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1795
9	4U56\|1\|6	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	1795
10	5ON6\|1\|6	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	1783
11	5MEI\|1\|6	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	1783
12	5TBW\|1\|sR	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1783
13	4U4Y\|1\|6	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
14	4U3M\|1\|6	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1795
15	4U4R\|1\|6	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	1795
16	4U3U\|1\|6	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	1795
17	4U6F\|1\|6	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1795
18	4U4U\|1\|6	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1795
19	4U4Q\|1\|6	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1795
20	4U4N\|1\|6	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1795
21	5I4L\|1\|6	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1795
22	4U51\|1\|6	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
23	4U55\|1\|6	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
24	4U4Z\|1\|6	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1795
25	4U3N\|1\|6	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
26	5TGA\|1\|6	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	1796
27	4V88\|1\|A6	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	1770
28	5LYB\|1\|6	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	1796
29	5TGM\|1\|6	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	1796
30	5DGV\|1\|6	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	1796
31	5DGE\|1\|6	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	1796
32	5DC3\|1\|6	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	1796
33	5DGF\|1\|6	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	1796
34	5DAT\|1\|6	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	1796
35	5NDV\|1\|6	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	1683
36	4V7R\|1\|A1	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	1789
37	5NDW\|1\|2	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	1770
38	5NDG\|1\|2	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	1688
39	5OBM\|1\|2	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	1712
40	4U4O\|1\|2	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	1750
41	5DGE\|1\|2	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	1782
42	5DC3\|1\|2	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	1782
43	5DGV\|1\|2	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	1782
44	5TBW\|1\|A	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1781
45	4U4Y\|1\|2	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
46	5TGA\|1\|2	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	1782
47	5LYB\|1\|2	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	1782
48	4V88\|1\|A2	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	1768
49	4U3U\|1\|2	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	1750
50	4U4R\|1\|2	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	1750
51	4U3M\|1\|2	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1750
52	4U6F\|1\|2	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1781
53	4U3N\|1\|2	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
54	4U4Q\|1\|2	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1750
55	4U4U\|1\|2	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1750
56	4U4N\|1\|2	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1750
57	5I4L\|1\|2	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1781
58	4U50\|1\|2	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
59	4U53\|1\|2	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	1750
60	4U4Z\|1\|2	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1750
61	4U55\|1\|2	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
62	4U51\|1\|2	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
63	4U52\|1\|2	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1750
64	5ON6\|1\|A	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	1781
65	5MEI\|1\|A	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	1781
66	4U56\|1\|2	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	1750
67	5TGM\|1\|2	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	1782
68	5DAT\|1\|2	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	1782
69	5DGF\|1\|2	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	1782
70	5NDV\|1\|2	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	1712
71	5JUP\|1\|A	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	ELECTRON MICROSCOPY	3.5	1781
72	5JUT\|1\|A	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)	ELECTRON MICROSCOPY	4	1781
73	5JUO\|1\|A	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)	ELECTRON MICROSCOPY	4	1781
74	5M1J\|1\|22	Nonstop ribosomal complex bound with Dom34 and Hbs1	ELECTRON MICROSCOPY	3.3	1781
75	5JUU\|1\|A	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)	ELECTRON MICROSCOPY	4	1781
76	5MC6\|1\|2	Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae	ELECTRON MICROSCOPY	3.8	1767
77	5LL6\|1\|2	Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation	ELECTRON MICROSCOPY	3.9	1325
78	6EML\|1\|2	Cryo-EM structure of a late pre-40S ribosomal subunit from Saccharomyces cerevisiae	ELECTRON MICROSCOPY	3.6	1675
79	6FAI\|1\|2	Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit	ELECTRON MICROSCOPY	3.4	1775
80	5WLC\|1\|L1+ 5WLC\|1\|L0+ 5WLC\|1\|L2	The complete structure of the small subunit processome	ELECTRON MICROSCOPY	3.8	1025

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_4.0_03510.19 Obsolete

Release history

Parents

Children