NR_4.0_03510.39

Members (106)
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#	IFE	Compound(s)	RNA source organism	Title	Method	Resolution	Date
1	4V88\|1\|A6 (rep)	18S rRNA	Saccharomyces cerevisiae	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	2014-07-09
2	5TBW\|1\|sR	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	2017-07-26
3	4V88\|1\|A2	18S RIBOSOMAL RNA	Saccharomyces cerevisiae	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	2014-07-09
4	5TBW\|1\|A	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	2017-07-26
5	6HHQ\|1\|sR	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	2019-02-20
6	5OBM\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	2017-12-13
7	5I4L\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	2016-06-22
8	5MEI\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	2017-06-28
9	5NDW\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	2017-12-13
10	5LYB\|1\|6	18S rRNA	Saccharomyces cerevisiae	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	2016-11-23
11	5I4L\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	2016-06-22
12	5MEI\|1\|A	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	2017-06-28
13	5OBM\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	2017-12-13
14	5ON6\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	2018-02-28
15	6HHQ\|1\|A	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	2019-02-20
16	5NDW\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	2017-12-13
17	5LYB\|1\|2	18S rRNA	Saccharomyces cerevisiae	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	2016-11-23
18	5ON6\|1\|A	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	2018-02-28
19	5NDV\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	2017-12-13
20	5NDV\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	2017-12-13
21	5NDG\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	2017-12-13
22	5NDG\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	2017-12-13
23	5TGM\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	2017-01-18
24	5TGM\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	2017-01-18
25	4V7R\|1\|A1	18S ribosomal RNA	Saccharomyces cerevisiae	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	2014-07-09
26	4V7R\|1\|C1	18S ribosomal RNA	Saccharomyces cerevisiae	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	2014-07-09
27	5DAT\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	2016-08-31
28	5TGA\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	2016-11-23
29	5DGE\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	2017-01-25
30	5DGV\|1\|6	Saccharomyces cerevisiae S288c RDN37-1 miscRNA	Saccharomyces cerevisiae	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	2016-12-14
31	5DGF\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	2016-12-14
32	5DC3\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	2016-06-01
33	5DAT\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	2016-08-31
34	5TGA\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	2016-11-23
35	5DGV\|1\|2	Saccharomyces cerevisiae S288c RDN37-1 miscRNA	Saccharomyces cerevisiae	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	2016-12-14
36	5DGE\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	2017-01-25
37	5DGF\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	2016-12-14
38	5DC3\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	2016-06-01
39	6T4Q\|1\|C2	18S rRNA	Saccharomyces cerevisiae	Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.	ELECTRON MICROSCOPY	2.6	2019-12-25
40	4U4R\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	2014-10-22
41	6WOO\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP	ELECTRON MICROSCOPY	2.9	2020-09-23
42	6TB3\|1\|2	Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1), rRNA	Saccharomyces cerevisiae	yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex	ELECTRON MICROSCOPY	2.8	2020-04-22
43	6SNT\|1\|2	Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1), rRNA	Saccharomyces cerevisiae	Yeast 80S ribosome stalled on SDD1 mRNA.	ELECTRON MICROSCOPY	2.8	2020-03-04
44	4U3U\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	2014-10-22
45	4U4R\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	2014-10-22
46	7A1G\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Structure of a crosslinked yeast ABCE1-bound 43S pre-initiation complex	ELECTRON MICROSCOPY	3	2020-10-14
47	6ZVI\|1\|h	18S rRNA	Saccharomyces cerevisiae	Mbf1-ribosome complex	ELECTRON MICROSCOPY	3	2020-09-09
48	4U3U\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	2014-10-22
49	4U3M\|1\|6	18S rRNA	Saccharomyces cerevisiae	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	2014-10-22
50	4U4Q\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	2014-10-22
51	4U4U\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	2014-10-22
52	4U52\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	2014-10-22
53	4U3M\|1\|2	18S rRNA	Saccharomyces cerevisiae	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	2014-10-22
54	4U6F\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	2014-10-22
55	4U4N\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	2014-10-22
56	4U52\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	2014-10-22
57	4U4U\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	2014-10-22
58	4U4Q\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	2014-10-22
59	6Q8Y\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex	ELECTRON MICROSCOPY	3.1	2019-03-13
60	4U4Z\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	2014-10-22
61	4U6F\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	2014-10-22
62	7B7D\|1\|2	18S rRNA	Saccharomyces cerevisiae S288C	Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs	ELECTRON MICROSCOPY	3.3	2021-03-10
63	4U4Y\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	2014-10-22
64	4U3N\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	2014-10-22
65	6SV4\|1\|2b	18S rRNA	Saccharomyces cerevisiae	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	2020-03-04
66	6SV4\|1\|2c	18S rRNA	Saccharomyces cerevisiae	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	2020-03-04
67	4U55\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	2014-10-22
68	6XIR\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress	ELECTRON MICROSCOPY	3.2	2020-08-26
69	6T7T\|1\|C2	18S rRNA	Saccharomyces cerevisiae	Structure of yeast 80S ribosome stalled on poly(A) tract.	ELECTRON MICROSCOPY	3.1	2019-12-25
70	5M1J\|1\|22	18S ribosomal RNA	Saccharomyces cerevisiae	Nonstop ribosomal complex bound with Dom34 and Hbs1	ELECTRON MICROSCOPY	3.3	2017-01-18
71	4U4Z\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	2014-10-22
72	4U4N\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	2014-10-22
73	4U50\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	2014-10-22
74	4U51\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	2014-10-22
75	6T7I\|1\|C2	18S ribosomal RNA	Saccharomyces cerevisiae	Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.	ELECTRON MICROSCOPY	3.2	2019-12-25
76	4U3N\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	2014-10-22
77	4U4Y\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	2014-10-22
78	4U51\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	2014-10-22
79	6TNU\|1\|2	18S rRNA	Saccharomyces cerevisiae	Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.	ELECTRON MICROSCOPY	3.1	2020-04-22
80	4U55\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	2014-10-22
81	6S47\|1\|BA	18S rRNA (1707-MER)	Saccharomyces cerevisiae	Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1	ELECTRON MICROSCOPY	3.28	2019-07-24
82	6FAI\|1\|2	20S ribosomal RNA	Saccharomyces cerevisiae	Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit	ELECTRON MICROSCOPY	3.4	2018-02-28
83	4U53\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	2014-10-22
84	5JUP\|1\|A	18S ribosomal RNA	Saccharomyces cerevisiae	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	ELECTRON MICROSCOPY	3.5	2016-10-05
85	4U50\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	2014-10-22
86	6Z6K\|1\|C2	18S rRNA	Saccharomyces cerevisiae	Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomes	ELECTRON MICROSCOPY	3.4	2020-07-29
87	6Z6J\|1\|C2	18S rRNA	Saccharomyces cerevisiae	Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native condition	ELECTRON MICROSCOPY	3.4	2020-07-29
88	6RBD\|1\|2	20S ribosomal RNA	Saccharomyces cerevisiae	State 1 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particles	ELECTRON MICROSCOPY	3.47	2019-06-26
89	4U53\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	2014-10-22
90	6SV4\|1\|2	18S rRNA	Saccharomyces cerevisiae	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	2020-03-04
91	4U56\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	2014-10-22
92	4U56\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	2014-10-22
93	5MC6\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae	ELECTRON MICROSCOPY	3.8	2017-01-18
94	6T83\|1\|2b	18S rRNA	Saccharomyces cerevisiae	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	ELECTRON MICROSCOPY	4	2019-12-25
95	6T83\|1\|a	18S rRNA	Saccharomyces cerevisiae	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	ELECTRON MICROSCOPY	4	2019-12-25
96	5JUO\|1\|A	18S ribosomal RNA	Saccharomyces cerevisiae	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)	ELECTRON MICROSCOPY	4	2016-10-05
97	5JUT\|1\|A	18S ribosomal RNA	Saccharomyces cerevisiae	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)	ELECTRON MICROSCOPY	4	2016-10-05
98	5JUU\|1\|A	18S ribosomal RNA	Saccharomyces cerevisiae	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)	ELECTRON MICROSCOPY	4	2016-10-05
99	6RBE\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	State 2 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particles	ELECTRON MICROSCOPY	3.8	2019-06-26
100	6EML\|1\|2	pre-18S ribosomal RNA	Saccharomyces cerevisiae	Cryo-EM structure of a late pre-40S ribosomal subunit from Saccharomyces cerevisiae	ELECTRON MICROSCOPY	3.6	2017-11-29
101	6GQB\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)	ELECTRON MICROSCOPY	3.9	2018-07-11
102	6Y7C\|1\|2	20S ribosomal RNA	Saccharomyces cerevisiae	Early cytoplasmic yeast pre-40S particle (purified with Tsr1 as bait)	ELECTRON MICROSCOPY	3.8	2020-03-18
103	6GQV\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)	ELECTRON MICROSCOPY	4	2018-07-11
104	4U4O\|1\|6	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	2014-10-22
105	4U4O\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	2014-10-22
106	5LL6\|1\|2	18S ribosomal RNA	Saccharomyces cerevisiae	Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation	ELECTRON MICROSCOPY	3.9	2017-04-12

Release history

Release	3.174	3.175	3.176
Date	2021-04-14	2021-04-21	2021-04-28

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_4.0_03510.39	NR_4.0_03510.38	3.174	(106) 5JUU\|1\|A, 5OBM\|1\|2, 5OBM\|1\|6, 5ON6\|1\|6, 5ON6\|1\|A, 5TBW\|1\|A, 5TBW\|1\|sR, 5TGA\|1\|2, 5TGA\|1\|6, 5TGM\|1\|2, 5TGM\|1\|6, 6EML\|1\|2, 5NDW\|1\|6, 5NDW\|1\|2, 5LL6\|1\|2, 5LYB\|1\|2, 5LYB\|1\|6, 5M1J\|1\|22, 5MC6\|1\|2, 5MEI\|1\|6, 5MEI\|1\|A, 5NDG\|1\|2, 5NDG\|1\|6, 5NDV\|1\|2, 5NDV\|1\|6, 6FAI\|1\|2, 6GQB\|1\|2, 6GQV\|1\|2, 6T83\|1\|2b, 6T83\|1\|a, 6TB3\|1\|2, 6TNU\|1\|2, 6WOO\|1\|2, 6XIR\|1\|2, 6Y7C\|1\|2, 6Z6J\|1\|C2, 6Z6K\|1\|C2, 6ZVI\|1\|h, 7A1G\|1\|2, 6T7T\|1\|C2, 6T7I\|1\|C2, 6HHQ\|1\|A, 6HHQ\|1\|sR, 6Q8Y\|1\|2, 6RBD\|1\|2, 6RBE\|1\|2, 6S47\|1\|BA, 6SNT\|1\|2, 6SV4\|1\|2, 6SV4\|1\|2b, 6SV4\|1\|2c, 6T4Q\|1\|C2, 7B7D\|1\|2, 4U3M\|1\|2, 4U4U\|1\|2, 4U4U\|1\|6, 4U4Y\|1\|2, 4U4Y\|1\|6, 4U4Z\|1\|2, 4U4Z\|1\|6, 4U50\|1\|2, 4U50\|1\|6, 4U51\|1\|2, 4U51\|1\|6, 4U52\|1\|2, 4U4R\|1\|6, 4U4R\|1\|2, 4U3M\|1\|6, 4U3N\|1\|2, 4U3N\|1\|6, 4U3U\|1\|2, 4U3U\|1\|6, 4U4N\|1\|2, 4U4N\|1\|6, 4U4O\|1\|2, 4U4O\|1\|6, 4U4Q\|1\|2, 4U4Q\|1\|6, 4U52\|1\|6, 4U53\|1\|2, 4U53\|1\|6, 5DC3\|1\|6, 5DGE\|1\|2, 5DGE\|1\|6, 5DGF\|1\|2, 5DGF\|1\|6, 5DGV\|1\|2, 5DGV\|1\|6, 5I4L\|1\|2, 5I4L\|1\|6, 5JUO\|1\|A, 5JUP\|1\|A, 5DC3\|1\|2, 5DAT\|1\|6, 4U55\|1\|2, 4U55\|1\|6, 4U56\|1\|2, 4U56\|1\|6, 4U6F\|1\|2, 4U6F\|1\|6, 4V7R\|1\|A1, 4	(0)	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_4.0_03510.39	NR_4.0_03510.40	3.177	(106) 4U4O\|1\|6, 7B7D\|1\|2, 4U52\|1\|6, 5DC3\|1\|6, 5M1J\|1\|22, 5TGA\|1\|2, 6SV4\|1\|2b, 4U4O\|1\|2, 7A1G\|1\|2, 4U52\|1\|2, 5DC3\|1\|2, 5LYB\|1\|6, 5TBW\|1\|sR, 6SV4\|1\|2, 4U4N\|1\|6, 6ZVI\|1\|h, 4U51\|1\|6, 5DAT\|1\|6, 5LYB\|1\|2, 5TBW\|1\|A, 6SNT\|1\|2, 4U4N\|1\|2, 6Z6K\|1\|C2, 4U51\|1\|2, 5DAT\|1\|2, 5LL6\|1\|2, 5ON6\|1\|A, 6S47\|1\|BA, 6Z6J\|1\|C2, 4U50\|1\|6, 4V88\|1\|A6, 5JUU\|1\|A, 5ON6\|1\|6, 6RBE\|1\|2, 4U3U\|1\|6, 6Y7C\|1\|2, 4U50\|1\|2, 4V88\|1\|A2, 5JUT\|1\|A, 5OBM\|1\|6, 6RBD\|1\|2, 4U3U\|1\|2, 6XIR\|1\|2, 4U4Z\|1\|6, 4V7R\|1\|C1, 5JUP\|1\|A, 5OBM\|1\|2, 6Q8Y\|1\|2, 4U3N\|1\|6, 6WOO\|1\|2, 4U4Z\|1\|2, 4V7R\|1\|A1, 5JUO\|1\|A, 5NDW\|1\|6, 6HHQ\|1\|sR, 4U3N\|1\|2, 6TNU\|1\|2, 4U4Y\|1\|6, 4U6F\|1\|6, 5I4L\|1\|6, 5NDW\|1\|2, 6HHQ\|1\|A, 4U3M\|1\|6, 6TB3\|1\|2, 4U4Y\|1\|2, 4U6F\|1\|2, 5I4L\|1\|2, 5NDV\|1\|6, 6GQV\|1\|2, 4U3M\|1\|2, 6T83\|1\|a, 4U4U\|1\|6, 4U56\|1\|6, 5DGV\|1\|6, 5NDV\|1\|2, 6GQB\|1\|2, 6T83\|1\|2b, 4U4U\|1\|2, 4U56\|1\|2, 5DGV\|1\|2, 5NDG\|1\|6, 6FAI\|1\|2, 6T7T\|1\|C2, 4U4R\|1\|6, 4U55\|1\|6, 5DGF\|1\|6, 5NDG\|1\|2, 6EML\|1\|2, 4U4R\|1\|2, 4U55\|1\|2, 5DGF\|1\|2, 5MEI\|1\|A, 5TGM\|1\|6, 6T7I\|1\|C2, 4U4Q\|1\|6, 4U53\|1\|6, 5DGE\|1\|6, 5MEI\|1\|6, 5TGM\|1\|2, 6T4Q\|1\|C2, 4U4Q\|1\|2,	(0)	(1) 7NRC\|1\|S2

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	6SV4\|1\|2c	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	1758
2	6SV4\|1\|2b	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	1758
3	6ZVI\|1\|h	Mbf1-ribosome complex	ELECTRON MICROSCOPY	3	1758
4	6XIR\|1\|2	Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress	ELECTRON MICROSCOPY	3.2	1708
5	4V7R\|1\|C1	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	1789
6	5NDV\|1\|6	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	1683
7	4U4O\|1\|6	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	1791
8	4U53\|1\|6	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	1795
9	4U50\|1\|6	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
10	4U4Z\|1\|6	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1795
11	4U55\|1\|6	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
12	4U51\|1\|6	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
13	5I4L\|1\|6	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1795
14	4U4N\|1\|6	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1795
15	4U4U\|1\|6	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1795
16	4U4Q\|1\|6	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1795
17	4U52\|1\|6	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1795
18	5ON6\|1\|6	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	1783
19	5MEI\|1\|6	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	1783
20	4U56\|1\|6	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	1795
21	5TGM\|1\|6	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	1796
22	5DGV\|1\|6	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	1796
23	5LYB\|1\|6	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	1796
24	4V88\|1\|A6	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	1770
25	5TGA\|1\|6	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	1796
26	4U6F\|1\|6	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1795
27	4U3N\|1\|6	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
28	4U4R\|1\|6	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	1795
29	4U3U\|1\|6	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	1795
30	4U3M\|1\|6	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1795
31	4U4Y\|1\|6	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
32	6HHQ\|1\|sR	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1783
33	5TBW\|1\|sR	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1783
34	5DC3\|1\|6	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	1796
35	5DGE\|1\|6	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	1796
36	5DGF\|1\|6	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	1796
37	5DAT\|1\|6	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	1796
38	5OBM\|1\|6	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	1739
39	5NDG\|1\|6	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	1700
40	5NDW\|1\|6	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	1736
41	4V7R\|1\|A1	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	1789
42	5NDG\|1\|2	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	1688
43	5NDW\|1\|2	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	1770
44	5OBM\|1\|2	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	1712
45	5DAT\|1\|2	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	1782
46	5DGF\|1\|2	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	1782
47	5DGE\|1\|2	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	1782
48	5DC3\|1\|2	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	1782
49	5DGV\|1\|2	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	1782
50	6HHQ\|1\|A	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1781
51	5TBW\|1\|A	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1781
52	5LYB\|1\|2	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	1782
53	4V88\|1\|A2	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	1768
54	5TGA\|1\|2	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	1782
55	4U6F\|1\|2	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1781
56	4U3U\|1\|2	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	1750
57	4U4R\|1\|2	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	1750
58	4U3M\|1\|2	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1750
59	4U3N\|1\|2	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
60	5I4L\|1\|2	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1781
61	4U4N\|1\|2	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1750
62	4U4U\|1\|2	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1750
63	4U4Q\|1\|2	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1750
64	4U52\|1\|2	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1750
65	4U55\|1\|2	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
66	4U51\|1\|2	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
67	4U4Y\|1\|2	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
68	4U4Z\|1\|2	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1750
69	4U50\|1\|2	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
70	4U53\|1\|2	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	1750
71	5MEI\|1\|A	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	1781
72	5ON6\|1\|A	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	1781
73	4U56\|1\|2	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	1750
74	5TGM\|1\|2	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	1782
75	4U4O\|1\|2	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	1750
76	5NDV\|1\|2	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	1712
77	5JUP\|1\|A	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	ELECTRON MICROSCOPY	3.5	1781
78	5JUT\|1\|A	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)	ELECTRON MICROSCOPY	4	1781
79	5JUO\|1\|A	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)	ELECTRON MICROSCOPY	4	1781
80	7A1G\|1\|2	Structure of a crosslinked yeast ABCE1-bound 43S pre-initiation complex	ELECTRON MICROSCOPY	3	1771
81	6GQV\|1\|2	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)	ELECTRON MICROSCOPY	4	1776
82	6GQB\|1\|2	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)	ELECTRON MICROSCOPY	3.9	1776
83	6WOO\|1\|2	CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP	ELECTRON MICROSCOPY	2.9	1780
84	5JUU\|1\|A	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)	ELECTRON MICROSCOPY	4	1781
85	6SV4\|1\|2	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	1758
86	6T83\|1\|a	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	ELECTRON MICROSCOPY	4	1758
87	6S47\|1\|BA	Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1	ELECTRON MICROSCOPY	3.28	1707
88	6Z6J\|1\|C2	Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native condition	ELECTRON MICROSCOPY	3.4	1700
89	6Z6K\|1\|C2	Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomes	ELECTRON MICROSCOPY	3.4	1700
90	5M1J\|1\|22	Nonstop ribosomal complex bound with Dom34 and Hbs1	ELECTRON MICROSCOPY	3.3	1781
91	6TNU\|1\|2	Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.	ELECTRON MICROSCOPY	3.1	1771
92	7B7D\|1\|2	Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs	ELECTRON MICROSCOPY	3.3	1771
93	6TB3\|1\|2	yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex	ELECTRON MICROSCOPY	2.8	1771
94	6SNT\|1\|2	Yeast 80S ribosome stalled on SDD1 mRNA.	ELECTRON MICROSCOPY	2.8	1771
95	6T4Q\|1\|C2	Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.	ELECTRON MICROSCOPY	2.6	1771
96	6T7I\|1\|C2	Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.	ELECTRON MICROSCOPY	3.2	1771
97	6T7T\|1\|C2	Structure of yeast 80S ribosome stalled on poly(A) tract.	ELECTRON MICROSCOPY	3.1	1771
98	6T83\|1\|2b	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	ELECTRON MICROSCOPY	4	1771
99	6Q8Y\|1\|2	Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex	ELECTRON MICROSCOPY	3.1	1767
100	5MC6\|1\|2	Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae	ELECTRON MICROSCOPY	3.8	1767
101	5LL6\|1\|2	Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation	ELECTRON MICROSCOPY	3.9	1325
102	6RBE\|1\|2	State 2 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particles	ELECTRON MICROSCOPY	3.8	1750
103	6FAI\|1\|2	Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit	ELECTRON MICROSCOPY	3.4	1775
104	6RBD\|1\|2	State 1 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particles	ELECTRON MICROSCOPY	3.47	1777
105	6Y7C\|1\|2	Early cytoplasmic yeast pre-40S particle (purified with Tsr1 as bait)	ELECTRON MICROSCOPY	3.8	1731
106	6EML\|1\|2	Cryo-EM structure of a late pre-40S ribosomal subunit from Saccharomyces cerevisiae	ELECTRON MICROSCOPY	3.6	1675

Equivalence class NR_4.0_03510.39 Obsolete

Release history

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