Equivalence class NR_4.0_05934.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 9ENB|1|D (rep) | Transfer RNA | tRNA-Gln | Homo sapiens | Eukarya | RF00005 | Human pseudouridine synthase 3 (PUS3 R116A mutant) and two tRNA-Gln | Electron microscopy | 2.66 | 2024-07-10 |
| 2 | 9ENB|1|C | Transfer RNA | tRNA-Gln | Homo sapiens | Eukarya | RF00005 | Human pseudouridine synthase 3 (PUS3 R116A mutant) and two tRNA-Gln | Electron microscopy | 2.66 | 2024-07-10 |
| 3 | 8PTX|1|X | Transfer RNA | tRNA Gln | Homo sapiens | Eukarya | RF00005 | Cryo-EM structure of human Elp123 in complex with tRNA, acetyl-CoA, 5'-deoxyadenosine and methionine | Electron microscopy | 2.87 | 2024-04-17 |
| 4 | 6RFL|1|U | Transfer RNA | chr17.trna16-GlnTTG | Homo sapiens | Eukarya | RF00005 | Structure of the complete Vaccinia DNA-dependent RNA polymerase complex | Electron microscopy | 2.76 | 2019-12-11 |
| 5 | 8OKD|1|C | Transfer RNA | human tRNA-Gln (70-MER) | Homo sapiens | Eukarya | RF00005 | Human pseudouridine synthase 3 and tRNA-Gln | Electron microscopy | 3.1 | 2024-07-10 |
| 6 | 9ENC|1|D | Transfer RNA | tRNA-Gln | Homo sapiens | Eukarya | RF00005 | Human pseudouridine synthase 3 (PUS3 R116A mutant) and one tRNA-Gln | Electron microscopy | 3.36 | 2024-07-10 |
| 7 | 8PTZ|1|X | Transfer RNA | tRNA Gln | Homo sapiens | Eukarya | RF00005 | Cryo-EM structure of human Elp123 in complex with tRNA, S-ethyl-CoA, 5'-deoxyadenosine and methionine | Electron microscopy | 3.35 | 2024-04-17 |
| 8 | 8OKD|1|X | Transfer RNA | human tRNA-Gln (70-MER) | Homo sapiens | Eukarya | RF00005 | Human pseudouridine synthase 3 and tRNA-Gln | Electron microscopy | 3.1 | 2024-07-10 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well.
| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6RFL|1|U | Structure of the complete Vaccinia DNA-dependent RNA polymerase complex | ELECTRON MICROSCOPY | 2.76 | 69 |
| 2 | 9ENB|1|C | Human pseudouridine synthase 3 (PUS3 R116A mutant) and two tRNA-Gln | ELECTRON MICROSCOPY | 2.66 | 72 |
| 3 | 9ENB|1|D | Human pseudouridine synthase 3 (PUS3 R116A mutant) and two tRNA-Gln | ELECTRON MICROSCOPY | 2.66 | 72 |
| 4 | 9ENC|1|D | Human pseudouridine synthase 3 (PUS3 R116A mutant) and one tRNA-Gln | ELECTRON MICROSCOPY | 3.36 | 75 |
| 5 | 8OKD|1|X | Human pseudouridine synthase 3 and tRNA-Gln | ELECTRON MICROSCOPY | 3.1 | 70 |
| 6 | 8OKD|1|C | Human pseudouridine synthase 3 and tRNA-Gln | ELECTRON MICROSCOPY | 3.1 | 70 |
| 7 | 8PTX|1|X | Cryo-EM structure of human Elp123 in complex with tRNA, acetyl-CoA, 5'-deoxyadenosine and methionine | ELECTRON MICROSCOPY | 2.87 | 75 |
| 8 | 8PTZ|1|X | Cryo-EM structure of human Elp123 in complex with tRNA, S-ethyl-CoA, 5'-deoxyadenosine and methionine | ELECTRON MICROSCOPY | 3.35 | 75 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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