#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
11XPU|1|M (rep)5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB)X-ray diffraction3.052004-11-02
21XPR|1|G5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB)X-ray diffraction3.152004-11-02
31XPU|1|G5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB)X-ray diffraction3.052004-11-02
41XPO|1|G5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycinX-ray diffraction3.152005-02-08
51XPR|1|H5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB)X-ray diffraction3.152004-11-02
61XPU|1|H5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB)X-ray diffraction3.052004-11-02
71XPO|1|H5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycinX-ray diffraction3.152005-02-08
81XPR|1|J5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB)X-ray diffraction3.152004-11-02
91XPU|1|J5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB)X-ray diffraction3.052004-11-02
101XPO|1|J5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycinX-ray diffraction3.152005-02-08
111XPR|1|K5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB)X-ray diffraction3.152004-11-02
121XPU|1|K5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB)X-ray diffraction3.052004-11-02
131XPO|1|K5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycinX-ray diffraction3.152005-02-08
141XPR|1|L5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB)X-ray diffraction3.152004-11-02
151XPU|1|L5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB)X-ray diffraction3.052004-11-02
161XPO|1|L5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycinX-ray diffraction3.152005-02-08
171XPR|1|M5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB)X-ray diffraction3.152004-11-02
181XPO|1|M5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycinX-ray diffraction3.152005-02-08

Release history

Release2.462.472.482.492.502.512.522.532.542.552.562.572.582.592.602.612.622.632.642.652.662.672.682.692.702.712.722.732.742.752.762.772.782.792.802.812.822.832.842.852.862.872.882.892.902.912.922.932.942.952.962.972.982.992.1002.1012.1022.1032.1042.1052.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.1583.03.13.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.983.993.1003.1013.1023.1033.1043.1053.1063.1073.1083.1093.1103.1113.1123.1133.1143.1153.1163.1173.1183.1193.1203.1213.1223.1233.1243.1253.1263.1273.1283.1293.1303.1313.1323.1333.1343.1353.1363.1373.1383.1393.1403.1413.1423.1433.1443.1453.1463.1473.1483.1493.1503.1513.1523.1533.1543.1553.1563.1573.1583.1593.1603.1613.1623.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.1763.1773.1783.1793.1803.1813.1823.1833.1843.1853.1863.1873.1883.1893.1903.1913.1923.1933.1943.1953.1963.1973.1983.1993.2003.2013.2023.2033.2043.2053.2063.2073.2083.2093.2103.2113.2123.2133.2143.2153.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.279
Date2015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-222016-01-292016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-012016-04-082016-04-152016-04-222016-04-292016-05-062016-05-132016-05-202016-05-272016-06-032016-06-102016-06-172016-06-242016-07-012016-07-082016-07-152016-07-222016-07-292016-08-052016-08-122016-08-192016-08-262016-09-022016-09-092016-09-162016-09-232016-09-302016-10-072016-10-142016-10-212016-10-282016-11-042016-11-112016-11-182016-11-252016-12-022016-12-092016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-082017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-232018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-092019-10-162019-10-232019-10-302019-11-062019-11-132019-11-202019-11-272019-12-042019-12-112019-12-182019-12-252020-01-012020-01-082020-01-152020-01-222020-01-292020-02-052020-02-122020-02-192020-02-262020-03-042020-03-112020-03-182020-03-252020-04-012020-04-082020-04-152020-04-222020-04-292020-05-062020-05-132020-05-202020-05-272020-06-032020-06-102020-06-172020-06-242020-07-012020-07-082020-07-152020-07-222020-07-292020-08-052020-08-122020-08-192020-08-262020-09-022020-09-092020-09-162020-09-232020-09-302020-10-072020-10-142020-10-212020-10-282020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-282021-05-052021-05-122021-05-192021-05-262021-06-022021-06-092021-06-162021-06-232021-06-302021-07-072021-07-142021-07-212021-07-282021-08-042021-08-112021-08-182021-08-252021-09-012021-09-082021-09-152021-09-222021-09-292021-10-062021-10-132021-10-202021-10-272021-11-032021-11-102021-11-172021-11-242021-12-012021-12-082021-12-152021-12-222021-12-292022-01-052022-01-122022-01-192022-01-262022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-19

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_09128.1NR_all_01820.12.46(1) 1XPU|1|G(17) 1XPU|1|K, 1XPU|1|J, 1XPU|1|H, 1XPR|1|M, 1XPR|1|L, 1XPR|1|K, 1XPR|1|J, 1XPR|1|H, 1XPR|1|G, 1XPO|1|M, 1XPO|1|L, 1XPO|1|K, 1XPO|1|J, 1XPO|1|H, 1XPO|1|G, 1XPU|1|M, 1XPU|1|L(0)
NR_4.0_09128.1NR_all_02391.12.46(1) 1XPO|1|J(17) 1XPU|1|M, 1XPU|1|L, 1XPU|1|K, 1XPU|1|J, 1XPU|1|H, 1XPU|1|G, 1XPR|1|M, 1XPR|1|L, 1XPR|1|K, 1XPR|1|J, 1XPR|1|H, 1XPR|1|G, 1XPO|1|M, 1XPO|1|L, 1XPO|1|K, 1XPO|1|H, 1XPO|1|G(0)
NR_4.0_09128.1NR_all_03845.12.46(1) 1XPO|1|G(17) 1XPU|1|H, 1XPU|1|G, 1XPR|1|M, 1XPR|1|L, 1XPR|1|K, 1XPR|1|J, 1XPR|1|H, 1XPR|1|G, 1XPO|1|M, 1XPO|1|L, 1XPO|1|K, 1XPO|1|J, 1XPO|1|H, 1XPU|1|M, 1XPU|1|L, 1XPU|1|K, 1XPU|1|J(0)
NR_4.0_09128.1NR_all_20479.12.46(1) 1XPR|1|L(17) 1XPU|1|M, 1XPU|1|L, 1XPU|1|K, 1XPU|1|J, 1XPU|1|H, 1XPU|1|G, 1XPR|1|M, 1XPR|1|K, 1XPR|1|J, 1XPR|1|H, 1XPR|1|G, 1XPO|1|M, 1XPO|1|L, 1XPO|1|K, 1XPO|1|J, 1XPO|1|H, 1XPO|1|G(0)
NR_4.0_09128.1NR_all_33345.12.46(1) 1XPU|1|K(17) 1XPR|1|L, 1XPR|1|K, 1XPR|1|J, 1XPR|1|H, 1XPR|1|G, 1XPO|1|M, 1XPO|1|L, 1XPO|1|K, 1XPO|1|J, 1XPO|1|H, 1XPO|1|G, 1XPU|1|M, 1XPU|1|L, 1XPU|1|J, 1XPU|1|H, 1XPU|1|G, 1XPR|1|M(0)
NR_4.0_09128.1NR_all_38439.12.46(1) 1XPR|1|M(17) 1XPU|1|M, 1XPU|1|L, 1XPU|1|K, 1XPU|1|J, 1XPU|1|H, 1XPU|1|G, 1XPR|1|L, 1XPR|1|K, 1XPR|1|J, 1XPR|1|H, 1XPR|1|G, 1XPO|1|M, 1XPO|1|L, 1XPO|1|K, 1XPO|1|J, 1XPO|1|H, 1XPO|1|G(0)
NR_4.0_09128.1NR_all_47555.12.46(1) 1XPU|1|M(17) 1XPR|1|J, 1XPR|1|H, 1XPR|1|G, 1XPO|1|M, 1XPO|1|L, 1XPO|1|K, 1XPO|1|J, 1XPO|1|H, 1XPO|1|G, 1XPU|1|L, 1XPU|1|K, 1XPU|1|J, 1XPU|1|H, 1XPU|1|G, 1XPR|1|M, 1XPR|1|L, 1XPR|1|K(0)
NR_4.0_09128.1NR_all_52766.12.46(1) 1XPO|1|K(17) 1XPU|1|M, 1XPU|1|L, 1XPU|1|K, 1XPU|1|J, 1XPU|1|H, 1XPU|1|G, 1XPR|1|M, 1XPR|1|L, 1XPR|1|K, 1XPR|1|J, 1XPR|1|H, 1XPR|1|G, 1XPO|1|M, 1XPO|1|L, 1XPO|1|J, 1XPO|1|H, 1XPO|1|G(0)
NR_4.0_09128.1NR_all_53938.12.46(2) 1XPO|1|M, 1XPR|1|K(16) 1XPR|1|H, 1XPR|1|G, 1XPO|1|L, 1XPO|1|K, 1XPO|1|J, 1XPO|1|H, 1XPO|1|G, 1XPU|1|M, 1XPU|1|L, 1XPU|1|K, 1XPU|1|J, 1XPU|1|H, 1XPU|1|G, 1XPR|1|M, 1XPR|1|L, 1XPR|1|J(0)
NR_4.0_09128.1NR_all_62816.12.46(2) 1XPR|1|J, 1XPU|1|J(16) 1XPR|1|K, 1XPR|1|H, 1XPR|1|G, 1XPO|1|M, 1XPO|1|L, 1XPO|1|K, 1XPO|1|J, 1XPO|1|H, 1XPO|1|G, 1XPU|1|M, 1XPU|1|L, 1XPU|1|K, 1XPU|1|H, 1XPU|1|G, 1XPR|1|M, 1XPR|1|L(0)
NR_4.0_09128.1NR_all_75991.12.46(1) 1XPO|1|H(17) 1XPR|1|K, 1XPR|1|J, 1XPR|1|H, 1XPR|1|G, 1XPO|1|M, 1XPO|1|L, 1XPO|1|K, 1XPO|1|J, 1XPO|1|G, 1XPU|1|M, 1XPU|1|L, 1XPU|1|K, 1XPU|1|J, 1XPU|1|H, 1XPU|1|G, 1XPR|1|M, 1XPR|1|L(0)
NR_4.0_09128.1NR_all_76028.12.46(1) 1XPU|1|L(17) 1XPU|1|M, 1XPU|1|K, 1XPU|1|J, 1XPU|1|H, 1XPU|1|G, 1XPR|1|M, 1XPR|1|L, 1XPR|1|K, 1XPR|1|J, 1XPR|1|H, 1XPR|1|G, 1XPO|1|M, 1XPO|1|L, 1XPO|1|K, 1XPO|1|J, 1XPO|1|H, 1XPO|1|G(0)
NR_4.0_09128.1NR_all_79273.12.46(1) 1XPU|1|H(17) 1XPR|1|G, 1XPO|1|M, 1XPO|1|L, 1XPO|1|K, 1XPO|1|J, 1XPO|1|H, 1XPO|1|G, 1XPU|1|M, 1XPU|1|L, 1XPU|1|K, 1XPU|1|J, 1XPU|1|G, 1XPR|1|M, 1XPR|1|L, 1XPR|1|K, 1XPR|1|J, 1XPR|1|H(0)
NR_4.0_09128.1NR_all_86694.12.46(1) 1XPO|1|L(17) 1XPU|1|M, 1XPU|1|L, 1XPU|1|K, 1XPU|1|J, 1XPU|1|H, 1XPU|1|G, 1XPR|1|M, 1XPR|1|L, 1XPR|1|K, 1XPR|1|J, 1XPR|1|H, 1XPR|1|G, 1XPO|1|M, 1XPO|1|K, 1XPO|1|J, 1XPO|1|H, 1XPO|1|G(0)
NR_4.0_09128.1NR_all_94970.12.46(1) 1XPR|1|H(17) 1XPO|1|L, 1XPO|1|K, 1XPO|1|J, 1XPO|1|H, 1XPO|1|G, 1XPU|1|M, 1XPU|1|L, 1XPU|1|K, 1XPU|1|J, 1XPU|1|H, 1XPU|1|G, 1XPR|1|M, 1XPR|1|L, 1XPR|1|K, 1XPR|1|J, 1XPR|1|G, 1XPO|1|M(0)
NR_4.0_09128.1NR_all_95107.12.46(1) 1XPR|1|G(17) 1XPU|1|M, 1XPU|1|L, 1XPU|1|K, 1XPU|1|J, 1XPU|1|H, 1XPU|1|G, 1XPR|1|M, 1XPR|1|L, 1XPR|1|K, 1XPR|1|J, 1XPR|1|H, 1XPO|1|M, 1XPO|1|L, 1XPO|1|K, 1XPO|1|J, 1XPO|1|H, 1XPO|1|G(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
11XPR|1|LStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB)X-RAY DIFFRACTION3.152
21XPU|1|LStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB)X-RAY DIFFRACTION3.052
31XPU|1|GStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB)X-RAY DIFFRACTION3.052
41XPU|1|HStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB)X-RAY DIFFRACTION3.052
51XPO|1|HStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycinX-RAY DIFFRACTION3.152
61XPU|1|KStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB)X-RAY DIFFRACTION3.052
71XPR|1|JStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB)X-RAY DIFFRACTION3.152
81XPU|1|JStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB)X-RAY DIFFRACTION3.052
91XPO|1|LStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycinX-RAY DIFFRACTION3.152
101XPO|1|JStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycinX-RAY DIFFRACTION3.152
111XPO|1|MStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycinX-RAY DIFFRACTION3.152
121XPR|1|KStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB)X-RAY DIFFRACTION3.152
131XPU|1|MStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB)X-RAY DIFFRACTION3.052
141XPR|1|MStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB)X-RAY DIFFRACTION3.152
151XPO|1|KStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycinX-RAY DIFFRACTION3.152
161XPO|1|GStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycinX-RAY DIFFRACTION3.152
171XPR|1|HStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB)X-RAY DIFFRACTION3.152
181XPR|1|GStructural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB)X-RAY DIFFRACTION3.152