Equivalence class NR_4.0_12406.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5FLX|1|z (rep) | Internal ribosome entry site | HCV-IRES | Hepacivirus C | Viruses | RF00061 | Mammalian 40S HCV-IRES complex | Electron microscopy | 3.9 | 2015-12-23 |
| 2 | 5A2Q|1|3 | Internal ribosome entry site | HCV IRES | Hepacivirus C | Viruses | RF00061 | Structure of the HCV IRES bound to the human ribosome | Electron microscopy | 3.9 | 2015-07-15 |
| 3 | 7SYW|1|z | Internal ribosome entry site | HCV IRES | Hepatitis C virus (isolate 1) | Viruses | RF00061 | Structure of the wt IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(wt) | Electron microscopy | 3.7 | 2022-07-13 |
| 4 | 7SYX|1|z | Internal ribosome entry site | HCV IRES | Hepatitis C virus (isolate 1) | Viruses | RF00061 | Structure of the delta dII IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(delta dII) | Electron microscopy | 3.7 | 2022-07-13 |
| 5 | 7SYN|1|z | Internal ribosome entry site | HCV IRES | Hepatitis C virus (isolate 1) | Viruses | RF00061 | Structure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 8(delta dII) | Electron microscopy | 4 | 2022-07-13 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7SYW|1|z | Structure of the wt IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(wt) | ELECTRON MICROSCOPY | 3.7 | 188 |
| 2 | 7SYX|1|z | Structure of the delta dII IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(delta dII) | ELECTRON MICROSCOPY | 3.7 | 188 |
| 3 | 7SYN|1|z | Structure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 8(delta dII) | ELECTRON MICROSCOPY | 4 | 162 |
| 4 | 5A2Q|1|3 | Structure of the HCV IRES bound to the human ribosome | ELECTRON MICROSCOPY | 3.9 | 257 |
| 5 | 5FLX|1|z | Mammalian 40S HCV-IRES complex | ELECTRON MICROSCOPY | 3.9 | 264 |