Equivalence class NR_4.0_17196.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8GWB|1|J+ 8GWB|1|I (rep) | template, primer | Severe acute respiratory syndrome coronavirus 2 | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | Electron microscopy | 2.75 | 2022-12-07 | |||
| 2 | 8GWI|1|J+ 8GWI|1|I | RNA (27-MER), primer | Severe acute respiratory syndrome coronavirus 2 | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | Electron microscopy | 3.18 | 2022-12-14 | |||
| 3 | 8GWG|1|J+ 8GWG|1|I | Template, primer | Severe acute respiratory syndrome coronavirus 2 | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | Electron microscopy | 3.37 | 2022-12-14 | |||
| 4 | 7EGQ|1|J+ 7EGQ|1|I | Template RNA, primer RNA | Severe acute respiratory syndrome coronavirus 2 | Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading | Electron microscopy | 3.35 | 2021-07-21 | |||
| 5 | 8GWO|1|J+ 8GWO|1|I | template, RNA (25-MER) | synthetic construct | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | Electron microscopy | 3.8 | 2022-11-30 | |||
| 6 | 7EGQ|1|M+ 7EGQ|1|L | Template RNA, primer RNA | Severe acute respiratory syndrome coronavirus 2 | Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading | Electron microscopy | 3.35 | 2021-07-21 | |||
| 7 | 8GWN|1|J+ 8GWN|1|I | template, primer | Severe acute respiratory syndrome coronavirus 2 | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | Electron microscopy | 3.38 | 2022-12-14 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_17196.1 | NR_4.0_95868.3 | 3.261 | (4) 8GWB|1|J+8GWB|1|I, 7EGQ|1|M+7EGQ|1|L, 7EGQ|1|J+7EGQ|1|I, 8GWO|1|J+8GWO|1|I | (3) 8GWG|1|J+8GWG|1|I, 8GWN|1|J+8GWN|1|I, 8GWI|1|J+8GWI|1|I | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_17196.1 | NR_4.0_17196.2 | 3.265 | (7) 8GWI|1|J+8GWI|1|I, 8GWG|1|J+8GWG|1|I, 8GWB|1|J+8GWB|1|I, 7EGQ|1|M+7EGQ|1|L, 7EGQ|1|J+7EGQ|1|I, 8GWO|1|J+8GWO|1|I, 8GWN|1|J+8GWN|1|I | (0) | (2) 8GWF|1|J+8GWF|1|I, 8GWE|1|J+8GWE|1|I |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 8GWN|1|J+8GWN|1|I | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | ELECTRON MICROSCOPY | 3.38 | 27 |
| 2 | 8GWO|1|J+8GWO|1|I | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | ELECTRON MICROSCOPY | 3.8 | 27 |
| 3 | 8GWB|1|J+8GWB|1|I | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | ELECTRON MICROSCOPY | 2.75 | 27 |
| 4 | 8GWI|1|J+8GWI|1|I | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | ELECTRON MICROSCOPY | 3.18 | 27 |
| 5 | 8GWG|1|J+8GWG|1|I | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | ELECTRON MICROSCOPY | 3.37 | 27 |
| 6 | 7EGQ|1|M+7EGQ|1|L | Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading | ELECTRON MICROSCOPY | 3.35 | 33 |
| 7 | 7EGQ|1|J+7EGQ|1|I | Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading | ELECTRON MICROSCOPY | 3.35 | 33 |