#IFECompound(s)RNA source organismTitleMethodResolutionDate
14J7L|1|B (rep)RNA (5'-R(P*UP*UP*UP*UP*U)-3')synthetic constructCrystal structure of mouse DXO in complex with PRODUCT RNA AND two MAGNESIUM ionsX-RAY DIFFRACTION1.82013-03-27
25W0M|1|JU5 single-stranded RNAsynthetic constructStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-RAY DIFFRACTION2.32017-06-28
35BUD|1|ERNA (5'-R(P*UP*UP*UP*U)-3')Candida albicansCrystal structure of Candida albicans Rai1 in complex with pU5-Mn2+X-RAY DIFFRACTION1.992015-07-08
45W0M|1|IU5 single-stranded RNAsynthetic constructStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-RAY DIFFRACTION2.32017-06-28
55W0M|1|HU5 single-stranded RNAsynthetic constructStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-RAY DIFFRACTION2.32017-06-28
64J7M|1|BRNA (5'-R(P*UP*(U37)P*(U37)P*UP*U)-3')synthetic constructCrystal structure of mouse DXO in complex with substrate mimic RNA and calcium ionX-RAY DIFFRACTION1.72013-03-27
75BUD|1|DRNA (5'-R(P*UP*UP*UP*U)-3')Candida albicansCrystal structure of Candida albicans Rai1 in complex with pU5-Mn2+X-RAY DIFFRACTION1.992015-07-08
86A4E|1|BRNA (5'-R(P*UP*UP*UP*UP*U)-3')synthetic constructTwo linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34HX-RAY DIFFRACTION2.452019-03-13
96A4E|1|DRNA (5'-R(P*UP*UP*UP*UP*U)-3')synthetic constructTwo linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34HX-RAY DIFFRACTION2.452019-03-13
106HXX|1|AaRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
116HXX|1|AbRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
126HXX|1|AcRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
136HXX|1|AdRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
146HXX|1|AeRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
156HXX|1|AfRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
166HXX|1|AgRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
176HXX|1|AhRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
186HXX|1|AiRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
196HXX|1|AjRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
206HXX|1|AkRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
216HXX|1|AlRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
226HXX|1|AmRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
236HXX|1|AnRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
246HXX|1|AoRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
256HXX|1|ApRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
266HXX|1|AqRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
276HXX|1|ArRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
286HXX|1|AsRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
296HXX|1|AtRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
306HXX|1|AuRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
316HXX|1|AvRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
326HXX|1|AwRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
336HXX|1|AxRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
346HXX|1|AyRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
356HXX|1|AzRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
366HXX|1|BaRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
376HXX|1|BbRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
386HXX|1|BcRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
396HXX|1|BdRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
406HXX|1|BeRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
416HXX|1|BfRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
426HXX|1|BgRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
436HXX|1|BhRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
446HXX|1|BiRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YELECTRON MICROSCOPY3.42019-08-07
455FN1|1|B5'-R(*UP*UP*UP*UP*UP)-3'Pepino mosaic virusElectron cryo-microscopy of filamentous flexible virus PepMV (Pepino Mosaic Virus)ELECTRON MICROSCOPY3.92015-12-30
465ODV|1|aRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
475ODV|1|bRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
485ODV|1|cRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
495ODV|1|dRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
505ODV|1|eRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
515ODV|1|fRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
525ODV|1|gRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
535ODV|1|hRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
545ODV|1|iRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
555ODV|1|jRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
565ODV|1|kRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
575ODV|1|lRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
585ODV|1|mRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
595ODV|1|nRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
605ODV|1|oRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
615ODV|1|pRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
625ODV|1|qRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
635ODV|1|rRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
645ODV|1|sRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
655ODV|1|tRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
665ODV|1|uRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
675ODV|1|vRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
685ODV|1|wRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27
695ODV|1|xRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY42017-09-27

Release history

Release3.1003.1013.1023.1033.1043.1053.1063.1073.1083.1093.1103.1113.1123.1133.1143.1153.1163.1173.1183.1193.1203.1213.1223.1233.1243.1253.1263.1273.1283.1293.1303.1313.1323.1333.1343.1353.1363.1373.1383.1393.1403.1413.1423.1433.1443.1453.1463.1473.1483.1493.1503.1513.1523.1533.1543.1553.1563.1573.1583.1593.1603.1613.1623.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.1763.1773.1783.1793.180
Date2019-11-132019-11-202019-11-272019-12-042019-12-112019-12-182019-12-252020-01-012020-01-082020-01-152020-01-222020-01-292020-02-052020-02-122020-02-192020-02-262020-03-042020-03-112020-03-182020-03-252020-04-012020-04-082020-04-152020-04-222020-04-292020-05-062020-05-132020-05-202020-05-272020-06-032020-06-102020-06-172020-06-242020-07-012020-07-082020-07-152020-07-222020-07-292020-08-052020-08-122020-08-192020-08-262020-09-022020-09-092020-09-162020-09-232020-09-302020-10-072020-10-142020-10-212020-10-282020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-282021-05-052021-05-122021-05-192021-05-26

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15FN1|1|BElectron cryo-microscopy of filamentous flexible virus PepMV (Pepino Mosaic Virus)ELECTRON MICROSCOPY3.95
25W0M|1|HStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-RAY DIFFRACTION2.34
35W0M|1|IStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-RAY DIFFRACTION2.34
45W0M|1|JStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-RAY DIFFRACTION2.34
56HXX|1|BfPotato virus YELECTRON MICROSCOPY3.45
66HXX|1|AjPotato virus YELECTRON MICROSCOPY3.45
76HXX|1|AiPotato virus YELECTRON MICROSCOPY3.45
86HXX|1|AhPotato virus YELECTRON MICROSCOPY3.45
96HXX|1|AmPotato virus YELECTRON MICROSCOPY3.45
106HXX|1|BcPotato virus YELECTRON MICROSCOPY3.45
116HXX|1|AdPotato virus YELECTRON MICROSCOPY3.45
126HXX|1|AqPotato virus YELECTRON MICROSCOPY3.45
136HXX|1|AvPotato virus YELECTRON MICROSCOPY3.45
146HXX|1|AxPotato virus YELECTRON MICROSCOPY3.45
156HXX|1|BaPotato virus YELECTRON MICROSCOPY3.45
166HXX|1|BgPotato virus YELECTRON MICROSCOPY3.45
176HXX|1|BdPotato virus YELECTRON MICROSCOPY3.45
186HXX|1|AnPotato virus YELECTRON MICROSCOPY3.45
196HXX|1|AePotato virus YELECTRON MICROSCOPY3.45
206HXX|1|AoPotato virus YELECTRON MICROSCOPY3.45
216HXX|1|BiPotato virus YELECTRON MICROSCOPY3.45
226HXX|1|ArPotato virus YELECTRON MICROSCOPY3.45
236HXX|1|AaPotato virus YELECTRON MICROSCOPY3.45
246HXX|1|AcPotato virus YELECTRON MICROSCOPY3.45
256HXX|1|BePotato virus YELECTRON MICROSCOPY3.45
266HXX|1|AwPotato virus YELECTRON MICROSCOPY3.45
276HXX|1|AkPotato virus YELECTRON MICROSCOPY3.45
286HXX|1|AlPotato virus YELECTRON MICROSCOPY3.45
296HXX|1|AtPotato virus YELECTRON MICROSCOPY3.45
306HXX|1|AbPotato virus YELECTRON MICROSCOPY3.45
316HXX|1|AfPotato virus YELECTRON MICROSCOPY3.45
326HXX|1|AsPotato virus YELECTRON MICROSCOPY3.45
336HXX|1|AgPotato virus YELECTRON MICROSCOPY3.45
346HXX|1|ApPotato virus YELECTRON MICROSCOPY3.45
356HXX|1|AzPotato virus YELECTRON MICROSCOPY3.45
366HXX|1|BbPotato virus YELECTRON MICROSCOPY3.45
376HXX|1|AuPotato virus YELECTRON MICROSCOPY3.45
386HXX|1|AyPotato virus YELECTRON MICROSCOPY3.45
396HXX|1|BhPotato virus YELECTRON MICROSCOPY3.45
405ODV|1|iStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
415ODV|1|bStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
425ODV|1|rStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
435ODV|1|aStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
445ODV|1|jStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
455ODV|1|pStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
465ODV|1|cStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
475ODV|1|dStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
485ODV|1|tStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
495ODV|1|uStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
505ODV|1|kStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
515ODV|1|eStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
525ODV|1|qStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
535ODV|1|lStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
545ODV|1|hStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
555ODV|1|oStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
565ODV|1|gStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
575ODV|1|sStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
585ODV|1|wStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
595ODV|1|mStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
605ODV|1|vStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
615ODV|1|nStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
625ODV|1|xStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
635ODV|1|fStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
645BUD|1|ECrystal structure of Candida albicans Rai1 in complex with pU5-Mn2+X-RAY DIFFRACTION1.995
655BUD|1|DCrystal structure of Candida albicans Rai1 in complex with pU5-Mn2+X-RAY DIFFRACTION1.994
664J7L|1|BCrystal structure of mouse DXO in complex with PRODUCT RNA AND two MAGNESIUM ionsX-RAY DIFFRACTION1.85
674J7M|1|BCrystal structure of mouse DXO in complex with substrate mimic RNA and calcium ionX-RAY DIFFRACTION1.73
686A4E|1|BTwo linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34HX-RAY DIFFRACTION2.452
696A4E|1|DTwo linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34HX-RAY DIFFRACTION2.452