#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18H6L|1|4A (rep)U4 spliceosomal RNAU4 snRNA, pre-mRNA, U6 snRNAHomo sapiensEukaryaRF00015Cryo-EM structure of human exon-defined spliceosome in the early B state.Electron microscopy2.62024-05-01
28H6K|1|4AU4 spliceosomal RNAU4 snRNA, pre-mRNA, U6 snRNAHomo sapiensEukaryaRF00015Cryo-EM structure of human exon-defined spliceosome in the mature B state.Electron microscopy2.72024-05-01
36QW6|1|4U4 spliceosomal RNAU4 snRNA, U6 snRNAHomo sapiensEukaryaRF00015Structure of the human U5.U4/U6 tri-snRNP at 2.9A resolution.Electron microscopy2.922019-04-17
48H6E|1|4AU4 spliceosomal RNAU4 snRNA, pre-mRNA, U6 snRNAHomo sapiensEukaryaRF00015Cryo-EM structure of human exon-defined spliceosome in the late pre-B state.Electron microscopy3.22024-05-01
58H6J|1|4AU4 spliceosomal RNAU4 snRNA, U6 snRNAHomo sapiensEukaryaRF00015Cryo-EM structure of human exon-defined spliceosome in the mature pre-B state.Electron microscopy3.252024-05-01
68QOZ|1|4U4 spliceosomal RNAU4 snRNA, U6 snRNA, 5'ss RNA oligoHomo sapiensEukaryaRF00015Cryo-EM Structure of Pre-B+5'ss+ATPgammaS Complex (core part)Electron microscopy3.12024-05-22
78Q7N|1|4U4 spliceosomal RNAU4 snRNAHomo sapiensEukaryaRF00015cryo-EM structure of the human spliceosomal B complex protomer (tri-snRNP core region)Electron microscopy3.12024-01-24
86QX9|1|4U4 spliceosomal RNAU4 snRNA, U6 snRNAHomo sapiensEukaryaRF00015Structure of a human fully-assembled precatalytic spliceosome (pre-B complex).Electron microscopy3.282019-04-17
98QPE|1|4U4 spliceosomal RNAU4 snRNA, U6 snRNA, oligo1, oligo2Homo sapiensEukaryaRF00015Cryo-EM Structure of Pre-B-like Complex (core part)Electron microscopy3.12024-05-22
108QP8|1|4U4 spliceosomal RNAU4 snRNA, U6 snRNAHomo sapiensEukaryaRF00015Cryo-EM Structure of Pre-B Complex (core part)Electron microscopy3.52024-05-22
118QPB|1|4U4 spliceosomal RNAU4 snRNA, U6 snRNA, 5'ss oligoHomo sapiensEukaryaRF00015Cryo-EM Structure of Pre-B+ATP Complex (core part)Electron microscopy3.72024-05-22
126AHD|1|I+ 6AHD|1|H+ 6AHD|1|FU4 spliceosomal RNA + U2 splicesomal small nuclear RNA + U6 spliceosomal RNAU4snRNA, U2snRNA, U6snRNA, pre-mRNAHomo sapiensEukaryaRF00015 + RF00004 + RF00026The Cryo-EM Structure of Human Pre-catalytic Spliceosome (B complex) at 3.8 angstrom resolutionElectron microscopy3.82018-11-14
138QPA|1|4U4 spliceosomal RNAU4 snRNA, U6 snRNA, 5'ss oligoHomo sapiensEukaryaRF00015Cryo-EM Structure of Pre-B+5'ssLNG Complex (core part)Electron microscopy3.72024-05-22

Release history

Release3.3363.3373.3383.3393.3403.3413.3423.343
Date2024-05-222024-05-292024-06-052024-06-122024-06-192024-06-262024-07-032024-07-10

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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
18H6K|1|4ACryo-EM structure of human exon-defined spliceosome in the mature B state.ELECTRON MICROSCOPY2.7128
28H6L|1|4ACryo-EM structure of human exon-defined spliceosome in the early B state.ELECTRON MICROSCOPY2.6128
36AHD|1|I+6AHD|1|H+6AHD|1|FThe Cryo-EM Structure of Human Pre-catalytic Spliceosome (B complex) at 3.8 angstrom resolutionELECTRON MICROSCOPY3.8136
48Q7N|1|4cryo-EM structure of the human spliceosomal B complex protomer (tri-snRNP core region)ELECTRON MICROSCOPY3.176
58QPE|1|4Cryo-EM Structure of Pre-B-like Complex (core part)ELECTRON MICROSCOPY3.163
68QOZ|1|4Cryo-EM Structure of Pre-B+5'ss+ATPgammaS Complex (core part)ELECTRON MICROSCOPY3.180
78QPB|1|4Cryo-EM Structure of Pre-B+ATP Complex (core part)ELECTRON MICROSCOPY3.780
88QPA|1|4Cryo-EM Structure of Pre-B+5'ssLNG Complex (core part)ELECTRON MICROSCOPY3.762
98H6E|1|4ACryo-EM structure of human exon-defined spliceosome in the late pre-B state.ELECTRON MICROSCOPY3.2125
108H6J|1|4ACryo-EM structure of human exon-defined spliceosome in the mature pre-B state.ELECTRON MICROSCOPY3.25125
116QX9|1|4Structure of a human fully-assembled precatalytic spliceosome (pre-B complex).ELECTRON MICROSCOPY3.28125
126QW6|1|4Structure of the human U5.U4/U6 tri-snRNP at 2.9A resolution.ELECTRON MICROSCOPY2.92125
138QP8|1|4Cryo-EM Structure of Pre-B Complex (core part)ELECTRON MICROSCOPY3.576
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