#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18PV7|1|C3 (rep)ITS2Thermochaetoides thermophila DSM 1495Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structureElectron microscopy2.122023-11-15
28PVK|1|C3ITS2Thermochaetoides thermophila DSM 1495Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structureElectron microscopy2.552023-12-06
38PV1|1|C3ITS2Thermochaetoides thermophila DSM 1495Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structureElectron microscopy2.562023-11-15
48I9V|1|C3RNA (161-MER)Thermochaetoides thermophila DSM 1495Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2Electron microscopy3.12023-05-17
58PV3|1|C3ITS2Thermochaetoides thermophila DSM 1495Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structureElectron microscopy2.82023-11-15
68PV4|1|C3ITS2Thermochaetoides thermophila DSM 1495Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structureElectron microscopy2.92023-11-15
78I9T|1|C3RNA (161-MER)Thermochaetoides thermophila DSM 1495Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1Electron microscopy3.62023-05-17

Release history

Release3.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.3353.3363.3373.3383.3393.3403.3413.3423.343
Date2023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-152024-05-222024-05-292024-06-052024-06-122024-06-192024-06-262024-07-032024-07-10

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
18PVK|1|C3Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structureELECTRON MICROSCOPY2.5582
28PV3|1|C3Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structureELECTRON MICROSCOPY2.882
38PV7|1|C3Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structureELECTRON MICROSCOPY2.1282
48PV1|1|C3Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structureELECTRON MICROSCOPY2.5682
58PV4|1|C3Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structureELECTRON MICROSCOPY2.982
68I9T|1|C3Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1ELECTRON MICROSCOPY3.698
78I9V|1|C3Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2ELECTRON MICROSCOPY3.198
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