#IFECompound(s)RNA source organismTitleMethodResolutionDate
16D9J|1|2 (rep)18S rRNAOryctolagus cuniculusMammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.ELECTRON MICROSCOPY3.22018-06-06
25LZS|1|918S ribosomal RNAOryctolagus cuniculusStructure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin BELECTRON MICROSCOPY3.312016-11-30
31VX5|1|218S ribosomal RNAStructure of the 80S mammalian ribosome bound to eEF2. This entry contains the small ribosomal subunit.ELECTRON MICROSCOPY3.52014-06-18
43J74|1|S218S ribosomal RNAStructure of the 80S mammalian ribosome bound to eEF2ELECTRON MICROSCOPY3.52014-06-18
56MTD|1|918S rRNAOryctolagus cuniculusRabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)ELECTRON MICROSCOPY3.32018-11-21
65LZV|1|918S ribosomal RNAOryctolagus cuniculusStructure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.ELECTRON MICROSCOPY3.352016-11-30
76D90|1|218S rRNAOryctolagus cuniculusMammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.ELECTRON MICROSCOPY3.22018-06-06
86MTC|1|918S rRNAOryctolagus cuniculusRabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)ELECTRON MICROSCOPY3.42018-11-21
96MTE|1|918S rRNAOryctolagus cuniculusRabbit 80S ribosome with eEF2 and SERBP1 (rotated state)ELECTRON MICROSCOPY3.42018-11-21
106GZ5|1|B118S ribosomal RNAOryctolagus cuniculustRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)ELECTRON MICROSCOPY3.52018-12-05
115LZZ|1|918S ribosomal RNAOryctolagus cuniculusStructure of the mammalian rescue complex with Pelota and Hbs1l (combined)ELECTRON MICROSCOPY3.472016-11-30
125LZW|1|918S ribosomal RNAOryctolagus cuniculusStructure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.ELECTRON MICROSCOPY3.532016-11-30
135LZX|1|918S ribosomal RNAOryctolagus cuniculusStructure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.ELECTRON MICROSCOPY3.672016-11-30
146GZ3|1|B118S ribosomal RNAOryctolagus cuniculustRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)ELECTRON MICROSCOPY3.62018-12-05
156GZ4|1|B118S ribosomal RNAOryctolagus cuniculustRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)ELECTRON MICROSCOPY3.62018-12-05
165LZT|1|918S ribosomal RNAOryctolagus cuniculusStructure of the mammalian ribosomal termination complex with eRF1 and eRF3.ELECTRON MICROSCOPY3.652016-11-30
176MTB|1|918S rRNAOryctolagus cuniculusRabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)ELECTRON MICROSCOPY3.62018-11-21
186HCJ|1|A218S ribosomal RNAOryctolagus cuniculusStructure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAsELECTRON MICROSCOPY3.82018-10-17
191VX2|1|218S ribosomal RNAStructure of the translating mammalian ribosome-Sec61 complex. This entry contains the small ribosomal subunit.ELECTRON MICROSCOPY3.92014-06-18
203J73|1|S218S ribosomal RNAStructure of the translating mammalian ribosome-Sec61 complexELECTRON MICROSCOPY3.92014-06-18
215LZU|1|918S ribosomal RNAOryctolagus cuniculusStructure of the mammalian ribosomal termination complex with accommodated eRF1ELECTRON MICROSCOPY3.752016-11-30
226HCF|1|A118S ribosomal RNAOryctolagus cuniculusStructure of the rabbit 80S ribosome stalled on globin mRNA at the stop codonELECTRON MICROSCOPY3.92018-10-17
233JAH|1|918S ribosomal RNAOryctolagus cuniculusStructure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codonELECTRON MICROSCOPY3.452015-08-12
245LZY|1|918S ribosomal RNAOryctolagus cuniculusStructure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.ELECTRON MICROSCOPY3.992016-11-30
255FLX|1|118S RRNAOryctolagus cuniculusMammalian 40S HCV-IRES complexELECTRON MICROSCOPY3.92015-12-23
263JAG|1|918S ribosomal RNAOryctolagus cuniculusStructure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codonELECTRON MICROSCOPY3.652015-08-12
273JAI|1|918S ribosomal RNAOryctolagus cuniculusStructure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codonELECTRON MICROSCOPY3.652015-08-12
283JAN|1|S218S ribosomal RNAOryctolagus cuniculusStructure of the scanning state of the mammalian SRP-ribosome complexELECTRON MICROSCOPY3.752015-08-05
293JAJ|1|S218S ribosomal RNAOryctolagus cuniculusStructure of the engaged state of the mammalian SRP-ribosome complexELECTRON MICROSCOPY3.752015-08-05

Release history

Release3.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.81
Date2018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-05

Children

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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16HCJ|1|A2Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAsELECTRON MICROSCOPY3.81740
26HCF|1|A1Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codonELECTRON MICROSCOPY3.91732
36D90|1|2Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.ELECTRON MICROSCOPY3.21697
46MTB|1|9Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)ELECTRON MICROSCOPY3.61664
56MTC|1|9Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)ELECTRON MICROSCOPY3.41664
65LZY|1|9Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.ELECTRON MICROSCOPY3.991698
75LZZ|1|9Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)ELECTRON MICROSCOPY3.471698
85LZX|1|9Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.ELECTRON MICROSCOPY3.671698
95LZW|1|9Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.ELECTRON MICROSCOPY3.531698
105LZU|1|9Structure of the mammalian ribosomal termination complex with accommodated eRF1ELECTRON MICROSCOPY3.751698
115LZV|1|9Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.ELECTRON MICROSCOPY3.351698
125LZT|1|9Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.ELECTRON MICROSCOPY3.651698
135LZS|1|9Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin BELECTRON MICROSCOPY3.311697
146GZ5|1|B1tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)ELECTRON MICROSCOPY3.51708
153JAI|1|9Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codonELECTRON MICROSCOPY3.651719
163JAG|1|9Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codonELECTRON MICROSCOPY3.651719
173JAH|1|9Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codonELECTRON MICROSCOPY3.451719
183JAJ|1|S2Structure of the engaged state of the mammalian SRP-ribosome complexELECTRON MICROSCOPY3.751742
193JAN|1|S2Structure of the scanning state of the mammalian SRP-ribosome complexELECTRON MICROSCOPY3.751742
203J73|1|S2Structure of the translating mammalian ribosome-Sec61 complexELECTRON MICROSCOPY3.91742
211VX2|1|2Structure of the translating mammalian ribosome-Sec61 complex. This entry contains the small ribosomal subunit.ELECTRON MICROSCOPY3.91742
221VX5|1|2Structure of the 80S mammalian ribosome bound to eEF2. This entry contains the small ribosomal subunit.ELECTRON MICROSCOPY3.51742
233J74|1|S2Structure of the 80S mammalian ribosome bound to eEF2ELECTRON MICROSCOPY3.51742
246D9J|1|2Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.ELECTRON MICROSCOPY3.21697
255FLX|1|1Mammalian 40S HCV-IRES complexELECTRON MICROSCOPY3.91708
266GZ3|1|B1tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)ELECTRON MICROSCOPY3.61708
276GZ4|1|B1tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)ELECTRON MICROSCOPY3.61708
286MTD|1|9Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)ELECTRON MICROSCOPY3.31692
296MTE|1|9Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)ELECTRON MICROSCOPY3.41664