#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14OQ9|1|z (rep)RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
24NIA|1|1RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
34OQ9|1|1RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
44NIA|1|2RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
54OQ9|1|2RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
64NIA|1|3RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
74OQ9|1|3RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
84NIA|1|4RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
94OQ9|1|4RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
104NIA|1|5RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
114OQ9|1|5RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
124NIA|1|6RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
134OQ9|1|6RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
144NIA|1|7RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
154OQ9|1|7RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
164NIA|1|8RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
174OQ9|1|8RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
183ER9|1|D5'-R(UP*U)-3'Crystal structure of the heterodimeric vaccinia virus mRNA polyadenylate polymerase complex with UU and 3'-deoxy ATPX-ray diffraction2.062009-06-16
194OQ8|1|DRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraintsX-ray diffraction1.452014-09-10
202VRT|1|E5'-R(*UP*UP)-3'Escherichia coliCrystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic DomainX-ray diffraction3.52008-07-22
211DDL|1|ERNA (5'-R(P*UP*U)-3')DESMODIUM YELLOW MOTTLE TYMOVIRUSX-ray diffraction2.72000-10-30
222VRT|1|F5'-R(*UP*UP)-3'Escherichia coliCrystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic DomainX-ray diffraction3.52008-07-22
234NIA|1|tRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
244OQ9|1|tRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
254NIA|1|uRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
264OQ9|1|uRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
274NIA|1|vRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
284OQ9|1|vRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
294NIA|1|wRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
304OQ9|1|wRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
314NIA|1|xRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
324OQ9|1|xRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
334NIA|1|yRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
344OQ9|1|yRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
354NIA|1|zRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10

Release history

Release2.462.472.482.492.502.512.522.532.542.552.562.572.582.592.602.612.622.632.642.652.662.672.682.692.702.712.722.732.742.752.762.772.782.792.802.812.822.832.842.852.862.872.882.892.902.912.922.932.942.952.962.972.98
Date2015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-222016-01-292016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-012016-04-082016-04-152016-04-222016-04-292016-05-062016-05-132016-05-202016-05-272016-06-032016-06-102016-06-172016-06-242016-07-012016-07-082016-07-152016-07-222016-07-292016-08-052016-08-122016-08-192016-08-262016-09-022016-09-092016-09-162016-09-232016-09-302016-10-072016-10-142016-10-21

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
14NIA|1|xSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
24OQ8|1|DSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraintsX-RAY DIFFRACTION1.452
31DDL|1|EDESMODIUM YELLOW MOTTLE TYMOVIRUSX-RAY DIFFRACTION2.72
44NIA|1|7Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
54NIA|1|8Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
64NIA|1|ySatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
74OQ9|1|8Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
84NIA|1|uSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
94OQ9|1|7Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
104OQ9|1|ySatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
114OQ9|1|zSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
124OQ9|1|1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
134OQ9|1|4Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
144NIA|1|zSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
154NIA|1|4Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
164OQ9|1|5Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
174NIA|1|1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
184NIA|1|5Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
194NIA|1|6Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
202VRT|1|FCrystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic DomainX-RAY DIFFRACTION3.52
212VRT|1|ECrystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic DomainX-RAY DIFFRACTION3.52
223ER9|1|DCrystal structure of the heterodimeric vaccinia virus mRNA polyadenylate polymerase complex with UU and 3'-deoxy ATPX-RAY DIFFRACTION2.062
234OQ9|1|6Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
244OQ9|1|uSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
254OQ9|1|3Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
264OQ9|1|vSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
274OQ9|1|2Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
284OQ9|1|xSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
294NIA|1|tSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
304NIA|1|vSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
314OQ9|1|tSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
324OQ9|1|wSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
334NIA|1|2Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
344NIA|1|wSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
354NIA|1|3Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

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