#IFECompound(s)RNA source organismTitleMethodResolutionDate
14OQ9|1|z (rep)RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
24NIA|1|1RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
34OQ9|1|1RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
44NIA|1|2RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
54OQ9|1|2RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
64NIA|1|3RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
74OQ9|1|3RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
84NIA|1|4RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
94OQ9|1|4RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
104NIA|1|5RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
114OQ9|1|5RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
124NIA|1|6RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
134OQ9|1|6RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
144NIA|1|7RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
154OQ9|1|7RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
164NIA|1|8RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
174OQ9|1|8RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
183ER9|1|D5'-R(UP*U)-3'Crystal structure of the heterodimeric vaccinia virus mRNA polyadenylate polymerase complex with UU and 3'-deoxy ATPX-RAY DIFFRACTION2.062009-06-16
194OQ8|1|DRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraintsX-RAY DIFFRACTION1.452014-09-10
202VRT|1|E5'-R(*UP*UP)-3'Escherichia coliCrystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic DomainX-RAY DIFFRACTION3.52008-07-22
211DDL|1|ERNA (5'-R(P*UP*U)-3')DESMODIUM YELLOW MOTTLE TYMOVIRUSX-RAY DIFFRACTION2.72000-10-30
222VRT|1|F5'-R(*UP*UP)-3'Escherichia coliCrystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic DomainX-RAY DIFFRACTION3.52008-07-22
235KAL|1|YRNA (5'-R(*UP*U)-3')Trypanosoma bruceiTerminal uridylyl transferase 4 from Trypanosoma brucei with bound UTP and UpUX-RAY DIFFRACTION2.752016-10-26
245KAL|1|ZRNA (5'-R(*UP*U)-3')Trypanosoma bruceiTerminal uridylyl transferase 4 from Trypanosoma brucei with bound UTP and UpUX-RAY DIFFRACTION2.752016-10-26
254NIA|1|tRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
264OQ9|1|tRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
274NIA|1|uRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
284OQ9|1|uRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
294NIA|1|vRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
304OQ9|1|vRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
314NIA|1|wRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
324OQ9|1|wRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
334NIA|1|xRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
344OQ9|1|xRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
354NIA|1|yRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
364OQ9|1|yRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
374NIA|1|zRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10

Release history

Release2.992.1002.1012.1022.1032.1042.1052.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.148
Date2016-10-282016-11-042016-11-112016-11-182016-11-252016-12-022016-12-092016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-30

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14OQ9|1|3Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
24OQ9|1|wSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
34NIA|1|3Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
44OQ9|1|xSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
55KAL|1|ZTerminal uridylyl transferase 4 from Trypanosoma brucei with bound UTP and UpUX-RAY DIFFRACTION2.752
64OQ8|1|DSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraintsX-RAY DIFFRACTION1.452
74NIA|1|2Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
84OQ9|1|vSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
94NIA|1|vSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
104OQ9|1|tSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
115KAL|1|YTerminal uridylyl transferase 4 from Trypanosoma brucei with bound UTP and UpUX-RAY DIFFRACTION2.752
124NIA|1|xSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
134OQ9|1|6Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
143ER9|1|DCrystal structure of the heterodimeric vaccinia virus mRNA polyadenylate polymerase complex with UU and 3'-deoxy ATPX-RAY DIFFRACTION2.062
154OQ9|1|uSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
164OQ9|1|7Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
174OQ9|1|ySatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
184NIA|1|uSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
194OQ9|1|8Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
204NIA|1|ySatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
214NIA|1|7Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
221DDL|1|EDESMODIUM YELLOW MOTTLE TYMOVIRUSX-RAY DIFFRACTION2.72
234OQ9|1|4Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
244NIA|1|zSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
254NIA|1|8Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
264NIA|1|4Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
274OQ9|1|5Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
284NIA|1|1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
294NIA|1|5Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
304NIA|1|6Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
312VRT|1|FCrystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic DomainX-RAY DIFFRACTION3.52
322VRT|1|ECrystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic DomainX-RAY DIFFRACTION3.52
334OQ9|1|1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
344OQ9|1|zSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
354NIA|1|tSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
364NIA|1|wSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
374OQ9|1|2Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452