#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17ACJ|1|4 (rep)Transfer-messenger RNAtransfer-messanger RNA (tmRNA)Escherichia coli BL21(DE3)BacteriaRF00023Structure of translocated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.22021-08-18
27ACR|1|4Transfer-messenger RNAtransfer-messenger RNA (tmRNA)Escherichia coliBacteriaRF00023Structure of post-translocated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.442021-08-18
38VSA|1|TMRNTransfer-messenger RNATMRNEscherichia coliBacteriaRF00023Endogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site of E. coli 70S ribosomeElectron microscopy3.72024-05-01
48VS9|1|TMRNTransfer-messenger RNATMRNEscherichia coliBacteriaRF00023Endogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site and deacyl-tRNA in the E site of E. coli 70S ribosomeElectron microscopy3.92024-05-01

Release history

Release3.3333.3343.3353.3363.3373.3383.3393.3403.3413.3423.3433.344
Date2024-05-012024-05-082024-05-152024-05-222024-05-292024-06-052024-06-122024-06-192024-06-262024-07-032024-07-102024-07-17

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
18VSA|1|TMRNEndogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site of E. coli 70S ribosomeELECTRON MICROSCOPY3.7363
28VS9|1|TMRNEndogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site and deacyl-tRNA in the E site of E. coli 70S ribosomeELECTRON MICROSCOPY3.9363
37ACJ|1|4Structure of translocated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.2360
47ACR|1|4Structure of post-translocated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.44360
Copyright 2024 BGSU RNA group. Page generated in 0.0087 s