#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16UFJ|1|C (rep)RNA (5'-R(*UP*CP*CP*AP*G)-3'), RNA (5'-R(*UP*CP*UP*GP*CP*UP*CP*UP*CP*(23G))-3'), RNA (50-MER)synthetic constructPistol ribozyme product crystal structureX-ray diffraction2.642019-12-18
26UFJ|1|ARNA (5'-R(*UP*CP*CP*AP*G)-3'), RNA (5'-R(*UP*CP*UP*GP*CP*UP*CP*UP*CP*(23G))-3'), RNA (50-MER)synthetic constructPistol ribozyme product crystal structureX-ray diffraction2.642019-12-18
36UEY|1|CPistol ribozymeRNA (5'-R(*UP*CP*UP*GP*CP*UP*CP*UP*CP*(GVA)*UP*CP*CP*AP*A)-3'), RNA (50-MER)Escherichia coliBacteriaRF02679Pistol ribozyme transition-state analog vanadateX-ray diffraction2.82019-12-18
45KTJ|1|APistol (50-MER), RNA (5'-R(*UP*CP*UP*GP*CP*UP*CP*UP*CP*GP*UP*CP*CP*AP*A)-3')metagenomeCrystal structure of Pistol, a class of self-cleaving ribozymeX-ray diffraction2.972016-10-05
56UEY|1|APistol ribozymeRNA (5'-R(*UP*CP*UP*GP*CP*UP*CP*UP*CP*(GVA)*UP*CP*CP*AP*A)-3'), RNA (50-MER)Escherichia coliBacteriaRF02679Pistol ribozyme transition-state analog vanadateX-ray diffraction2.82019-12-18
65KTJ|1|CPistol (50-MER), RNA (5'-R(*UP*CP*UP*GP*CP*UP*CP*UP*CP*GP*UP*CP*CP*AP*A)-3')metagenomeCrystal structure of Pistol, a class of self-cleaving ribozymeX-ray diffraction2.972016-10-05
76UF1|1|CPistol ribozymeRNA (5'-R(*UP*CP*UP*GP*CP*UP*CP*UP*CP*(GVA)*UP*CP*CP*AP*A)-3'), RNA (50-MER)Escherichia coliBacteriaRF02679Pistol ribozyme transition-state analog vanadateX-ray diffraction3.12019-12-18
86UF1|1|APistol ribozymeRNA (5'-R(*UP*CP*UP*GP*CP*UP*CP*UP*CP*(GVA)*UP*CP*CP*AP*A)-3'), RNA (50-MER)Escherichia coliBacteriaRF02679Pistol ribozyme transition-state analog vanadateX-ray diffraction3.12019-12-18
96UFK|1|ARNA (5'-R(*UP*CP*CP*AP*G)-3'), RNA (5'-R(*UP*CP*UP*GP*CP*UP*CP*UP*CP*(23G))-3'), RNA (50-MER)synthetic constructPistol ribozyme product crystal soaked in Mn2+X-ray diffraction3.22019-12-18
106UFK|1|CRNA (5'-R(*UP*CP*CP*AP*G)-3'), RNA (5'-R(*UP*CP*UP*GP*CP*UP*CP*UP*CP*(23G))-3'), RNA (50-MER)synthetic constructPistol ribozyme product crystal soaked in Mn2+X-ray diffraction3.22019-12-18

Release history

Release3.1063.1073.1083.1093.1103.1113.1123.1133.1143.1153.1163.1173.1183.1193.1203.1213.1223.1233.1243.1253.1263.1273.1283.1293.1303.1313.1323.1333.1343.1353.1363.1373.1383.1393.1403.1413.1423.1433.1443.1453.1463.1473.1483.1493.1503.1513.1523.1533.1543.1553.1563.1573.1583.1593.1603.1613.1623.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.1763.1773.1783.1793.1803.1813.1823.1833.1843.1853.1863.1873.1883.1893.1903.1913.1923.1933.1943.1953.1963.1973.1983.1993.2003.2013.2023.2033.2043.2053.2063.2073.2083.2093.2103.2113.2123.2133.2143.2153.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.332
Date2019-12-252020-01-012020-01-082020-01-152020-01-222020-01-292020-02-052020-02-122020-02-192020-02-262020-03-042020-03-112020-03-182020-03-252020-04-012020-04-082020-04-152020-04-222020-04-292020-05-062020-05-132020-05-202020-05-272020-06-032020-06-102020-06-172020-06-242020-07-012020-07-082020-07-152020-07-222020-07-292020-08-052020-08-122020-08-192020-08-262020-09-022020-09-092020-09-162020-09-232020-09-302020-10-072020-10-142020-10-212020-10-282020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-282021-05-052021-05-122021-05-192021-05-262021-06-022021-06-092021-06-162021-06-232021-06-302021-07-072021-07-142021-07-212021-07-282021-08-042021-08-112021-08-182021-08-252021-09-012021-09-082021-09-152021-09-222021-09-292021-10-062021-10-132021-10-202021-10-272021-11-032021-11-102021-11-172021-11-242021-12-012021-12-082021-12-152021-12-222021-12-292022-01-052022-01-122022-01-192022-01-262022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-24

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_24394.1NR_4.0_23226.13.106(2) 5KTJ|1|A, 5KTJ|1|C(8) 6UEY|1|A, 6UEY|1|C, 6UF1|1|A, 6UF1|1|C, 6UFJ|1|A, 6UFJ|1|C, 6UFK|1|A, 6UFK|1|C(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
16UEY|1|CPistol ribozyme transition-state analog vanadateX-RAY DIFFRACTION2.850
26UF1|1|CPistol ribozyme transition-state analog vanadateX-RAY DIFFRACTION3.150
36UFK|1|CPistol ribozyme product crystal soaked in Mn2+X-RAY DIFFRACTION3.250
46UFJ|1|CPistol ribozyme product crystal structureX-RAY DIFFRACTION2.6450
55KTJ|1|CCrystal structure of Pistol, a class of self-cleaving ribozymeX-RAY DIFFRACTION2.9749
65KTJ|1|ACrystal structure of Pistol, a class of self-cleaving ribozymeX-RAY DIFFRACTION2.9749
76UFK|1|APistol ribozyme product crystal soaked in Mn2+X-RAY DIFFRACTION3.250
86UFJ|1|APistol ribozyme product crystal structureX-RAY DIFFRACTION2.6450
96UEY|1|APistol ribozyme transition-state analog vanadateX-RAY DIFFRACTION2.850
106UF1|1|APistol ribozyme transition-state analog vanadateX-RAY DIFFRACTION3.150

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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