#IFECompound(s)RNA source organismTitleMethodResolutionDate
15AXM|1|P (rep)RNA (75-MER)Saccharomyces cerevisiaeCrystal structure of Thg1 like protein (TLP) with tRNA(Phe)X-RAY DIFFRACTION2.212016-08-03
25AXN|1|PRNA (75-MER)Saccharomyces cerevisiaeCrystal structure of Thg1 like protein (TLP) with tRNA(Phe) and GDPNPX-RAY DIFFRACTION2.72016-08-03
31OB2|1|BTRANSFER-RNA, PHESaccharomyces cerevisiaeE. coli elongation factor EF-Tu complexed with the antibiotic kirromycin, a GTP analog, and Phe-tRNAX-RAY DIFFRACTION3.352004-05-27
44TNA|1|ATRNAPHESaccharomyces cerevisiaeFURTHER REFINEMENT OF THE STRUCTURE OF YEAST T-RNA-PHEX-RAY DIFFRACTION2.51978-04-12
51EHZ|1|ATRANSFER RNA (PHE)Saccharomyces cerevisiaeThe crystal structure of yeast phenylalanine tRNA at 1.93 A resolutionX-RAY DIFFRACTION1.932000-10-02
61I9V|1|APHENYLALANINE TRANSFER RNASaccharomyces cerevisiaeCRYSTAL STRUCTURE ANALYSIS OF A TRNA-NEOMYCIN COMPLEXX-RAY DIFFRACTION2.62001-06-04
71TN1|1|ATRNAPHESaccharomyces cerevisiaeCRYSTALLOGRAPHIC AND BIOCHEMICAL INVESTIGATION OF THE LEAD(II)-CATALYZED HYDROLYSIS OF YEAST PHENYLALANINE TRNAX-RAY DIFFRACTION31987-01-15
81TN2|1|ATRNAPHESaccharomyces cerevisiaeCRYSTALLOGRAPHIC AND BIOCHEMICAL INVESTIGATION OF THE LEAD(II)-CATALYZED HYDROLYSIS OF YEAST PHENYLALANINE T-RNAX-RAY DIFFRACTION31986-10-24
95M1J|1|A3yeast Phe-tRNA-Phe, nonstop mRNASaccharomyces cerevisiaeNonstop ribosomal complex bound with Dom34 and Hbs1ELECTRON MICROSCOPY3.32017-01-18
106GQV|1|AYTransfer RNA - Phe, Messenger RNASaccharomyces cerevisiaeCryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)ELECTRON MICROSCOPY42018-07-11
114TRA|1|ATRNAPHESaccharomyces cerevisiaeRESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALSX-RAY DIFFRACTION31987-11-06
126TNA|1|ATRNAPHESaccharomyces cerevisiaeCRYSTAL STRUCTURE OF YEAST PHENYLALANINE T-RNA. I.CRYSTALLOGRAPHIC REFINEMENTX-RAY DIFFRACTION2.71979-01-16
136GQB|1|AXTransfer RNA - Phe, Messenger RNASaccharomyces cerevisiaeCryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)ELECTRON MICROSCOPY3.92018-07-11
141TRA|1|ATRNAPHESaccharomyces cerevisiaeRESTRAINED REFINEMENT OF THE MONOCLINIC FORM OF YEAST PHENYLALANINE TRANSFER RNA. TEMPERATURE FACTORS AND DYNAMICS, COORDINATED WATERS, AND BASE-PAIR PROPELLER TWIST ANGLESX-RAY DIFFRACTION31986-07-14

Release history

Release3.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.50
Date2018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-30

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_30153.4NR_4.0_30153.33.30(12) 6TNA|1|A, 5M1J|1|A3, 5AXN|1|P, 5AXM|1|P, 4TRA|1|A, 4TNA|1|A, 1TRA|1|A, 1TN2|1|A, 1TN1|1|A, 1OB2|1|B, 1I9V|1|A, 1EHZ|1|A(2) 6GQV|1|AY, 6GQB|1|AX(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_30153.4NR_4.0_30153.53.51(14) 4TRA|1|A, 4TNA|1|A, 1TRA|1|A, 6TNA|1|A, 1TN2|1|A, 6GQV|1|AY, 1TN1|1|A, 6GQB|1|AX, 1OB2|1|B, 5M1J|1|A3, 1I9V|1|A, 5AXN|1|P, 1EHZ|1|A, 5AXM|1|P(0) (2) 6GZ3|1|Bw, 6GZ5|1|Bw

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15M1J|1|A3Nonstop ribosomal complex bound with Dom34 and Hbs1ELECTRON MICROSCOPY3.362
26GQB|1|AXCryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)ELECTRON MICROSCOPY3.976
36GQV|1|AYCryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)ELECTRON MICROSCOPY476
41I9V|1|ACRYSTAL STRUCTURE ANALYSIS OF A TRNA-NEOMYCIN COMPLEXX-RAY DIFFRACTION2.674
54TRA|1|ARESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALSX-RAY DIFFRACTION362
66TNA|1|ACRYSTAL STRUCTURE OF YEAST PHENYLALANINE T-RNA. I.CRYSTALLOGRAPHIC REFINEMENTX-RAY DIFFRACTION2.762
71EHZ|1|AThe crystal structure of yeast phenylalanine tRNA at 1.93 A resolutionX-RAY DIFFRACTION1.9362
81TRA|1|ARESTRAINED REFINEMENT OF THE MONOCLINIC FORM OF YEAST PHENYLALANINE TRANSFER RNA. TEMPERATURE FACTORS AND DYNAMICS, COORDINATED WATERS, AND BASE-PAIR PROPELLER TWIST ANGLESX-RAY DIFFRACTION362
94TNA|1|AFURTHER REFINEMENT OF THE STRUCTURE OF YEAST T-RNA-PHEX-RAY DIFFRACTION2.562
101TN1|1|ACRYSTALLOGRAPHIC AND BIOCHEMICAL INVESTIGATION OF THE LEAD(II)-CATALYZED HYDROLYSIS OF YEAST PHENYLALANINE TRNAX-RAY DIFFRACTION362
111TN2|1|ACRYSTALLOGRAPHIC AND BIOCHEMICAL INVESTIGATION OF THE LEAD(II)-CATALYZED HYDROLYSIS OF YEAST PHENYLALANINE T-RNAX-RAY DIFFRACTION362
125AXM|1|PCrystal structure of Thg1 like protein (TLP) with tRNA(Phe)X-RAY DIFFRACTION2.2172
135AXN|1|PCrystal structure of Thg1 like protein (TLP) with tRNA(Phe) and GDPNPX-RAY DIFFRACTION2.765
141OB2|1|BE. coli elongation factor EF-Tu complexed with the antibiotic kirromycin, a GTP analog, and Phe-tRNAX-RAY DIFFRACTION3.3563