#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16BK8|1|5 (rep)U5 spliceosomal RNARNA (34-MER), U5 snRNASaccharomyces cerevisiaeEukaryaRF00020S. cerevisiae spliceosomal post-catalytic P complexElectron microscopy3.32018-02-21
25GMK|1|DU5 spliceosomal RNA5'-Exon, U5 snRNASaccharomyces cerevisiaeEukaryaRF00020Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolutionElectron microscopy3.42016-08-17
36EXN|1|5U5 spliceosomal RNALigated exons: UBC4 mRNA, U5 snRNASaccharomyces cerevisiaeEukaryaRF00020Post-catalytic P complex spliceosome with 3' splice site dockedElectron microscopy3.72018-01-17
45YLZ|1|BU5 spliceosomal RNAmRNA/intron lariat, U2 snRNA, U5 snRNASaccharomyces cerevisiaeEukaryaRF00020Cryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstromElectron microscopy3.62018-07-18
55LJ3|1|UU5 spliceosomal RNAExon 1 (5' exon) of UBC4 pre-mRNA, U5 snRNA (small nuclear RNA)Saccharomyces cerevisiaeEukaryaRF00020Structure of the core of the yeast spliceosome immediately after branchingElectron microscopy3.82016-08-03
65GAN|1|UU5 spliceosomal RNAU5 snRNASaccharomyces cerevisiaeEukaryaRF00020The overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 AngstromElectron microscopy3.72016-01-27
75MPS|1|5U5 spliceosomal RNAU5 snRNA, UBC4 gene exonSaccharomyces cerevisiaeEukaryaRF00020Structure of a spliceosome remodeled for exon ligationElectron microscopy3.852017-01-18
85WSG|1|DU5 spliceosomal RNA5'-exon, U5 snRNASaccharomyces cerevisiaeEukaryaRF00020Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolutionElectron microscopy42017-01-25
95GAM|1|UU5 spliceosomal RNAU5 snRNASaccharomyces cerevisiaeEukaryaRF00020Foot region of the yeast spliceosomal U4/U6.U5 tri-snRNPElectron microscopy3.72016-02-03
103JCM|1|FU5 spliceosomal RNApre-mRNA, SNR6 snRNA, SNR7-L snRNASaccharomyces cerevisiaeEukaryaRF00020Cryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNPElectron microscopy3.82016-02-24

Release history

Release3.313.32
Date2018-07-202018-07-27

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_30457.8NR_4.0_30457.73.31(9) 3JCM|1|F, 5GAM|1|U, 5GAN|1|U, 5GMK|1|D, 5LJ3|1|U, 5MPS|1|5, 5WSG|1|D, 6BK8|1|5, 6EXN|1|5(1) 5YLZ|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_30457.8NR_4.0_30457.93.33(10) 3JCM|1|F, 5GAM|1|U, 5GAN|1|U, 5GMK|1|D, 5LJ3|1|U, 5MPS|1|5, 5WSG|1|D, 5YLZ|1|B, 6BK8|1|5, 6EXN|1|5(0) (1) 5Y88|1|B

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
16EXN|1|5Post-catalytic P complex spliceosome with 3' splice site dockedELECTRON MICROSCOPY3.7171
26BK8|1|5S. cerevisiae spliceosomal post-catalytic P complexELECTRON MICROSCOPY3.3103
35YLZ|1|BCryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstromELECTRON MICROSCOPY3.6117
45WSG|1|DCryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolutionELECTRON MICROSCOPY4117
55GMK|1|DCryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolutionELECTRON MICROSCOPY3.4117
65MPS|1|5Structure of a spliceosome remodeled for exon ligationELECTRON MICROSCOPY3.85141
75LJ3|1|UStructure of the core of the yeast spliceosome immediately after branchingELECTRON MICROSCOPY3.8141
85GAN|1|UThe overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 AngstromELECTRON MICROSCOPY3.7141
95GAM|1|UFoot region of the yeast spliceosomal U4/U6.U5 tri-snRNPELECTRON MICROSCOPY3.7141
103JCM|1|FCryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNPELECTRON MICROSCOPY3.8113

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 0.0173 s