Equivalence class NR_4.0_33014.1 Obsolete
| # | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
|---|---|---|---|---|---|---|---|
| 1 | 6LQP|1|SA+ 6LQP|1|5A+ 6LQP|1|3A (rep) | 18S pre-rRNA, 5' ETS, U3 snoRNA | Saccharomyces cerevisiae | Cryo-EM structure of 90S small subunit preribosomes in transition states (State A) | ELECTRON MICROSCOPY | 3.2 | 2020-09-16 |
| 2 | 6KE6|1|SA+ 6KE6|1|5A+ 6KE6|1|3A | 18S rRNA, 5' ETS, U3 snoRNA | Saccharomyces cerevisiae | 3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome | ELECTRON MICROSCOPY | 3.4 | 2020-08-05 |
| 3 | 6LQU|1|SA+ 6LQU|1|5A+ 6LQU|1|3A | 18S pre-rRNA, 5' ETS, U3 snoRNA | Saccharomyces cerevisiae | Cryo-EM structure of 90S small subunit preribosomes in transition states (State A1) | ELECTRON MICROSCOPY | 3.7 | 2020-09-16 |
| 4 | 6LQS|1|SA | 18S pre-rRNA | Saccharomyces cerevisiae | Cryo-EM structure of 90S small subunit preribosomes in transition states (State D) | ELECTRON MICROSCOPY | 3.8 | 2020-09-16 |
| 5 | 5WLC|1|L1+ 5WLC|1|L0+ 5WLC|1|L2 | 18S pre-rRNA, 5' ETS, U3 snoRNA | Saccharomyces cerevisiae | The complete structure of the small subunit processome | ELECTRON MICROSCOPY | 3.8 | 2017-09-27 |
Release history
| Release | 3.144 |
|---|---|
| Date | 2020-09-16 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_33014.1 | NR_4.0_34640.2 | 3.144 | (2) 6KE6|1|SA+6KE6|1|5A+6KE6|1|3A, 5WLC|1|L1+5WLC|1|L0+5WLC|1|L2 | (3) 6LQU|1|SA+6LQU|1|5A+6LQU|1|3A, 6LQS|1|SA, 6LQP|1|SA+6LQP|1|5A+6LQP|1|3A | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_33014.1 | NR_4.0_33014.2 | 3.145 | (5) 6LQS|1|SA, 6LQP|1|SA+6LQP|1|5A+6LQP|1|3A, 6KE6|1|SA+6KE6|1|5A+6KE6|1|3A, 5WLC|1|L1+5WLC|1|L0+5WLC|1|L2, 6LQU|1|SA+6LQU|1|5A+6LQU|1|3A | (0) | (4) 6ZQB|1|D3+6ZQB|1|D2+6ZQB|1|D4, 6ZQG|1|D3, 6ZQD|1|D3, 6ZQC|1|D3 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6LQS|1|SA | Cryo-EM structure of 90S small subunit preribosomes in transition states (State D) | ELECTRON MICROSCOPY | 3.8 | 1249 |
| 2 | 6KE6|1|SA+6KE6|1|5A+6KE6|1|3A | 3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome | ELECTRON MICROSCOPY | 3.4 | 1310 |
| 3 | 6LQP|1|SA+6LQP|1|5A+6LQP|1|3A | Cryo-EM structure of 90S small subunit preribosomes in transition states (State A) | ELECTRON MICROSCOPY | 3.2 | 1325 |
| 4 | 6LQU|1|SA+6LQU|1|5A+6LQU|1|3A | Cryo-EM structure of 90S small subunit preribosomes in transition states (State A1) | ELECTRON MICROSCOPY | 3.7 | 1242 |
| 5 | 5WLC|1|L1+5WLC|1|L0+5WLC|1|L2 | The complete structure of the small subunit processome | ELECTRON MICROSCOPY | 3.8 | 1025 |