#IFECompound(s)RNA source organismTitleMethodResolutionDate
13S17|1|R (rep)RNA (5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*G)-3')RNA Polymerase II Initiation Complex with a 9-nt RNAX-RAY DIFFRACTION3.22011-08-10
26UPY|1|RRNAsynthetic constructRNA polymerase II elongation complex with 5-guanidinohydantoin lesion in state 2EX-RAY DIFFRACTION3.42020-06-10
36UQ2|1|RRNAsynthetic constructRNA polymerase II elongation complex with dG in state 1X-RAY DIFFRACTION3.22020-06-10
46UPX|1|RRNAsynthetic constructRNA polymerase II elongation complex with 5-guanidinohydantoin lesion in state 1X-RAY DIFFRACTION3.42020-06-10
52E2J|1|R5'-R(P*AP*UP*CP*GP*AP*GP*AP*GP*G)-3'synthetic constructRNA polymerase II elongation complex in 5 mM Mg+2 with GMPCPPX-RAY DIFFRACTION3.52006-12-12
66O6C|1|KRNA (5'-R(P*AP*UP*CP*GP*AP*GP*AP*GP*G)-3')Saccharomyces cerevisiaeRNA polymerase II elongation complex arrested at a CPD lesionELECTRON MICROSCOPY3.12019-06-26

Release history

Release3.1303.1313.1323.1333.1343.1353.1363.1373.1383.1393.1403.1413.1423.1433.1443.1453.1463.1473.1483.1493.1503.1513.1523.1533.1543.1553.1563.1573.1583.1593.1603.1613.1623.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.1763.1773.1783.1793.1803.1813.1823.1833.1843.1853.1863.1873.1883.1893.1903.1913.1923.1933.1943.1953.1963.1973.1983.1993.2003.2013.2023.2033.2043.2053.2063.2073.2083.2093.2103.2113.212
Date2020-06-102020-06-172020-06-242020-07-012020-07-082020-07-152020-07-222020-07-292020-08-052020-08-122020-08-192020-08-262020-09-022020-09-092020-09-162020-09-232020-09-302020-10-072020-10-142020-10-212020-10-282020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-282021-05-052021-05-122021-05-192021-05-262021-06-022021-06-092021-06-162021-06-232021-06-302021-07-072021-07-142021-07-212021-07-282021-08-042021-08-112021-08-182021-08-252021-09-012021-09-082021-09-152021-09-222021-09-292021-10-062021-10-132021-10-202021-10-272021-11-032021-11-102021-11-172021-11-242021-12-012021-12-082021-12-152021-12-222021-12-292022-01-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_33912.1NR_4.0_31327.23.130(3) 6O6C|1|K, 3S17|1|R, 2E2J|1|R(3) 6UQ2|1|R, 6UPY|1|R, 6UPX|1|R(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_33912.1NR_4.0_33912.23.213(6) 6UQ2|1|R, 6UPY|1|R, 6UPX|1|R, 6O6C|1|K, 3S17|1|R, 2E2J|1|R(0) (2) 7RIM|1|R, 7RIQ|1|R

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
12E2J|1|RRNA polymerase II elongation complex in 5 mM Mg+2 with GMPCPPX-RAY DIFFRACTION3.59
26UPY|1|RRNA polymerase II elongation complex with 5-guanidinohydantoin lesion in state 2EX-RAY DIFFRACTION3.49
36UPX|1|RRNA polymerase II elongation complex with 5-guanidinohydantoin lesion in state 1X-RAY DIFFRACTION3.49
43S17|1|RRNA Polymerase II Initiation Complex with a 9-nt RNAX-RAY DIFFRACTION3.29
56UQ2|1|RRNA polymerase II elongation complex with dG in state 1X-RAY DIFFRACTION3.29
66O6C|1|KRNA polymerase II elongation complex arrested at a CPD lesionELECTRON MICROSCOPY3.19