Equivalence class NR_4.0_34961.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6N7R|1|R (rep) | U1 spliceosomal RNA | ACT1 pre-mRNA, U1 snRNA | Saccharomyces cerevisiae | Eukarya | RF00488 | Saccharomyces cerevisiae spliceosomal E complex (ACT1) | Electron microscopy | 3.2 | 558 | 2019-09-18 |
| 2 | 6N7P|1|R | U1 spliceosomal RNA | U1 snRNA, UBC4 pre-mRNA | Saccharomyces cerevisiae | Eukarya | RF00488 | S. cerevisiae spliceosomal E complex (UBC4) | Electron microscopy | 3.6 | 558 | 2019-09-18 |
| 3 | 5ZWN|1|P | U1 spliceosomal RNA | pre-mRNA, U1 snRNA | Saccharomyces cerevisiae | Eukarya | RF00488 | Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.3 angstrom (Part II: U1 snRNP region) | Electron microscopy | 3.4 | 480 | 2018-08-29 |
| 4 | 6N7X|1|R | U1 spliceosomal RNA | U1 snRNA | Saccharomyces cerevisiae | Eukarya | RF00488 | S. cerevisiae U1 snRNP | Electron microscopy | 3.6 | 308 | 2019-07-24 |
| 5 | 5UZ5|1|R | RNA | S. cerevisiae U1 snRNP | Electron microscopy | 3.7 | 308 | 2017-11-15 |
Release history
| Release | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 | 3.99 | 3.100 | 3.101 | 3.102 | 3.103 | 3.104 | 3.105 | 3.106 | 3.107 | 3.108 | 3.109 | 3.110 | 3.111 | 3.112 | 3.113 | 3.114 | 3.115 | 3.116 | 3.117 | 3.118 | 3.119 | 3.120 | 3.121 | 3.122 | 3.123 | 3.124 | 3.125 | 3.126 | 3.127 | 3.128 | 3.129 | 3.130 | 3.131 | 3.132 | 3.133 | 3.134 | 3.135 | 3.136 | 3.137 | 3.138 | 3.139 | 3.140 | 3.141 | 3.142 | 3.143 | 3.144 | 3.145 | 3.146 | 3.147 | 3.148 | 3.149 | 3.150 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-09-19 | 2019-09-25 | 2019-10-03 | 2019-10-09 | 2019-10-16 | 2019-10-23 | 2019-10-30 | 2019-11-06 | 2019-11-13 | 2019-11-20 | 2019-11-27 | 2019-12-04 | 2019-12-11 | 2019-12-18 | 2019-12-25 | 2020-01-01 | 2020-01-08 | 2020-01-15 | 2020-01-22 | 2020-01-29 | 2020-02-05 | 2020-02-12 | 2020-02-19 | 2020-02-26 | 2020-03-04 | 2020-03-11 | 2020-03-18 | 2020-03-25 | 2020-04-01 | 2020-04-08 | 2020-04-15 | 2020-04-22 | 2020-04-29 | 2020-05-06 | 2020-05-13 | 2020-05-20 | 2020-05-27 | 2020-06-03 | 2020-06-10 | 2020-06-17 | 2020-06-24 | 2020-07-01 | 2020-07-08 | 2020-07-15 | 2020-07-22 | 2020-07-29 | 2020-08-05 | 2020-08-12 | 2020-08-19 | 2020-08-26 | 2020-09-02 | 2020-09-09 | 2020-09-16 | 2020-09-23 | 2020-09-30 | 2020-10-07 | 2020-10-14 | 2020-10-21 | 2020-10-28 |
Parents
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 5ZWN|1|P | Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.3 angstrom (Part II: U1 snRNP region) | ELECTRON MICROSCOPY | 3.4 | 480 | |
| 2 | 6N7X|1|R | S. cerevisiae U1 snRNP | ELECTRON MICROSCOPY | 3.6 | 308 | |
| 3 | 5UZ5|1|R | S. cerevisiae U1 snRNP | ELECTRON MICROSCOPY | 3.7 | 308 | |
| 4 | 6N7R|1|R | Saccharomyces cerevisiae spliceosomal E complex (ACT1) | ELECTRON MICROSCOPY | 3.2 | 558 | |
| 5 | 6N7P|1|R | S. cerevisiae spliceosomal E complex (UBC4) | ELECTRON MICROSCOPY | 3.6 | 558 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: