#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14V9R|1|AX (rep)Transfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction32014-07-09
24V9S|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-ray diffraction3.12014-07-09
34TUD|1|QVTransfer RNAP-site tRNA-fMet, A-site ASL-SufJ, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
44TUA|1|QVTransfer RNAP-site tRNA-fMet, A-site ASL-Thr, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
54P70|1|XVTransfer RNAP-site tRNA fMET, mRNA, A site ASL of tRNA-Proline CGG (unmodified)Escherichia coliBacteriaRF00005Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-ray diffraction3.682014-08-13
64V5F|1|AVTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNAEscherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.62014-07-09
74V9S|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-ray diffraction3.12014-07-09
84V9R|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction32014-07-09
93JCE|1|8Transfer RNAtRNA, mRNAsynthetic constructSyntheticRF00005Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.22016-01-13
104V7M|1|AXTransfer RNAtRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliBacteriaRF00005The structures of Capreomycin bound to the 70S ribosome.X-ray diffraction3.452014-07-09
114V63|1|AYTransfer RNAP and E-site tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
124V67|1|AYTransfer RNAP AND E-SITE TRNA(FMET), MRNAEscherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
134V87|1|BCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
144V8F|1|CCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-ray diffraction3.32014-07-09
154V9I|1|CVTransfer RNAP-SITE tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.32014-07-09
164V6A|1|CWTransfer RNAtRNA-Met, RNA (5'-R(P*AP*AP*AP*UP*G)-3')Escherichia coliBacteriaRF00005Structure of EF-P bound to the 70S ribosome.X-ray diffraction3.12014-07-09
174V63|1|CYTransfer RNAP and E-site tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
184V67|1|CYTransfer RNAP AND E-SITE TRNA(FMET), MRNAEscherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
194V8C|1|DCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
204YZV|1|QVTransfer RNAP-site tRNA-fMet, messenger RNAEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-ray diffraction3.12015-10-21
214TUB|1|QVTransfer RNAP-site tRNA f-Met, A-site tRNA Thr, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
224TUB|1|XVTransfer RNAP-site tRNA f-Met, A-site tRNA Thr, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
234TUD|1|XVTransfer RNAP-site tRNA-fMet, A-site ASL-SufJ, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
244V5F|1|CVTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNAEscherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.62014-07-09
254Z3S|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
265DOY|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.62015-12-30
275KPS|1|31Transfer RNAP site tRNAfmet, mRNAEscherichia coliBacteriaRF00005Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)Electron microscopy3.92016-09-28
285KPW|1|31Transfer RNAP-site tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)Electron microscopy3.92016-09-28
295KPS|1|32Transfer RNAE-site tRNAfMetEscherichia coliBacteriaRF00005Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)Electron microscopy3.92016-09-28
304V8B|1|ACTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
314V67|1|AZTransfer RNAP AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
324V63|1|AZTransfer RNAP and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
334V8E|1|BCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-ray diffraction3.32014-07-09
344V8Q|1|BVTransfer RNAE-SITE or P-SITE TRNA FMET, MRNAEscherichia coliBacteriaRF00005Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-ray diffraction3.12014-07-09
354V8B|1|CCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
364V6G|1|CCTransfer RNATRNA FMET (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
374V8C|1|CCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
384V8J|1|CVTransfer RNAtRNA-fMet, tRNA-Phe, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G347U.X-ray diffraction3.92014-07-09
394V63|1|CZTransfer RNAP and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
404V67|1|CZTransfer RNAP AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
414V8E|1|DCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-ray diffraction3.32014-07-09
425D8B|1|EDTransfer RNAtRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.632015-10-14
435D8B|1|FDTransfer RNAtRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.632015-10-14
444TUC|1|QVTransfer RNAP-site tRNA fMet, A-site ASL-SufJ, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
454ZSN|1|QVTransfer RNAP-site tRNA-fMet, messenger RNAEscherichia coliBacteriaRF0000570S-wild-type HigB toxin complex bound to a AAA lysine codonX-ray diffraction3.62016-09-07
464P70|1|QVTransfer RNAP-site tRNA fMET, mRNA, A site ASL of tRNA-Proline CGG (unmodified)Escherichia coliBacteriaRF00005Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-ray diffraction3.682014-08-13
474LT8|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL ProEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.142014-08-06
484LNT|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
494W4G|1|XVTransfer RNAtRNA fMet, messenger RNAEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.32015-10-21
504P6F|1|XVTransfer RNAtRNA-fMet, E-Site tRNA-Phe or A-Site tRNA-Phe, mRNAEscherichia coliBacteriaRF00005Crystal structure of the peptolide 12C bound to bacterial ribosomeX-ray diffraction3.62014-10-01
514LT8|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL ProEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.142014-08-06
524YZV|1|XVTransfer RNAP-site tRNA-fMet, messenger RNAEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-ray diffraction3.12015-10-21
535HCQ|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
545HCR|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
555HCP|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.892016-04-06
564Y4P|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
574WRO|1|2KTransfer RNAtRNA-fMet, RNA (30-MER)Escherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
584Y4P|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
594Z8C|1|2xTransfer RNAInitiator Methionine tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.92015-05-20
603CW5|1|ATransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005E. coli Initiator tRNAX-ray diffraction3.12008-09-02
614W2I|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
624W2G|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
634W2F|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
641VY5|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
654W2H|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
664W2I|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
674W2G|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
684W2F|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
691VY5|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
704V5C|1|AVTransfer RNAP-SITE TRNA FMET, MRNAEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.32014-07-09
715DOY|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.62015-12-30
725IBB|1|2LTransfer RNAtRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.962016-05-25
734Z3S|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
741VY6|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.92014-08-20
751VY4|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
761VY7|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
771VY6|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.92014-08-20
784WPO|1|DXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
795KPX|1|31Transfer RNAP-site tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)Electron microscopy3.92016-09-28
804V8D|1|ACTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction32014-07-09
814V9I|1|AVTransfer RNAP-SITE tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.32014-07-09
824V6A|1|AWTransfer RNAtRNA-Met, RNA (5'-R(P*AP*AP*AP*UP*G)-3')Escherichia coliBacteriaRF00005Structure of EF-P bound to the 70S ribosome.X-ray diffraction3.12014-07-09
834V87|1|CCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
844V7M|1|CXTransfer RNARNA (77-MER), RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliBacteriaRF00005The structures of Capreomycin bound to the 70S ribosome.X-ray diffraction3.452014-07-09
854YPB|1|QVTransfer RNAtRNA fMet, messenger RNAEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.42015-10-21
864LNT|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
874P6F|1|QVTransfer RNAtRNA-fMet, E-Site tRNA-Phe or A-Site tRNA-Phe, mRNAEscherichia coliBacteriaRF00005Crystal structure of the peptolide 12C bound to bacterial ribosomeX-ray diffraction3.62014-10-01
884TUC|1|XVTransfer RNAP-site tRNA fMet, A-site ASL-SufJ, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
894TUA|1|XVTransfer RNAP-site tRNA-fMet, A-site ASL-Thr, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
904ZSN|1|XVTransfer RNAP-site tRNA-fMet, messenger RNAEscherichia coliBacteriaRF0000570S-wild-type HigB toxin complex bound to a AAA lysine codonX-ray diffraction3.62016-09-07
914YPB|1|XVTransfer RNAtRNA fMet, messenger RNAEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.42015-10-21
925HAU|1|1wTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction32016-04-06
934Z8C|1|1xTransfer RNAInitiator Methionine tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.92015-05-20
945J4B|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62016-04-27
954ZER|1|1xTransfer RNAtRNA met, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3.12015-05-20
965HD1|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.72016-04-06
975IB7|1|2KTransfer RNAtRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-ray diffraction2.992016-05-25
985EL4|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-ray diffraction3.152016-01-27
994WQR|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.152015-06-10
1004WT1|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
1014WSD|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
1025EL6|1|2KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-ray diffraction3.12016-01-27
1035EL7|1|2KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-ray diffraction3.152016-01-27
1045IBB|1|2KTransfer RNAtRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.962016-05-25
1055HAU|1|2wTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction32016-04-06
1065J4C|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82016-04-27
1074ZER|1|2xTransfer RNAtRNA met, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3.12015-05-20
1085HCR|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
1095HD1|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.72016-04-06
1105HCP|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.892016-04-06
1115J4B|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62016-04-27
1125HCQ|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
1133CW6|1|ATransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005E. coli Initiator tRNAX-ray diffraction3.32008-09-02
1144WQY|1|BXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.82015-01-28
1155KPX|1|32Transfer RNAE-site tRNAfMetEscherichia coliBacteriaRF00005Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)Electron microscopy3.92016-09-28
1164V8D|1|CCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction32014-07-09
1174V97|1|CVTransfer RNAP-SITE tRNA fMet, E-SITE TRNA PHE OR A-SITE tRNA Phe, mRNAEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G299A.X-ray diffraction3.522014-07-09
1184LSK|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.482014-08-06
1194L71|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-ray diffraction3.92014-08-06
1204LEL|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-ray diffraction3.92014-08-06
1211VVJ|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.442014-08-06
1224W4G|1|QVTransfer RNAtRNA fMet, messenger RNAEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.32015-10-21
1234LFZ|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-ray diffraction3.922014-08-06
1244LFZ|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-ray diffraction3.922014-08-06
1254LEL|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-ray diffraction3.92014-08-06
1264LSK|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.482014-08-06
1274L71|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-ray diffraction3.92014-08-06
1281VVJ|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.442014-08-06
1294WR6|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-ray diffraction3.052015-06-10
1304WPO|1|BXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
1314V6G|1|CBTransfer RNATRNA FMET (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
1325F8K|1|1xTransfer RNAtRNAiMet, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-02-03
1335J4C|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82016-04-27
1345EL5|1|2KTransfer RNAtRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-ray diffraction3.152016-01-27
1354WQ1|1|2KTransfer RNAtRNA-fMET, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.12015-06-10
1365E7K|1|2KTransfer RNAtRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-ray diffraction3.22016-01-27
1375IB8|1|2KTransfer RNAtRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-ray diffraction3.132016-05-25
1384WQ1|1|2LTransfer RNAtRNA-fMET, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.12015-06-10
1394WSD|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
1405EL6|1|2LTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-ray diffraction3.12016-01-27
1415F8K|1|2xTransfer RNAtRNAiMet, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-02-03
1424W2H|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
1434WQY|1|DXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.82015-01-28
1444V51|1|AVTransfer RNAP-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
1454V51|1|CVTransfer RNAP-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
1464V5F|1|CWTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.62014-07-09
1474WRA|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-ray diffraction3.052015-06-10
1484WZO|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.32015-06-10
1495J4D|1|IATransfer RNAtRNAEscherichia coliBacteriaRF00005E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-ray diffraction3.12016-05-18
1505J4D|1|NCTransfer RNAtRNAEscherichia coliBacteriaRF00005E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-ray diffraction3.12016-05-18
1514V6G|1|ACTransfer RNATRNA FMET (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
1524V5K|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
1534V97|1|AVTransfer RNAP-SITE tRNA fMet, E-SITE TRNA PHE OR A-SITE tRNA Phe, mRNAEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G299A.X-ray diffraction3.522014-07-09
1544V7P|1|AWTransfer RNAP-site tRNA-fMet, messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')Escherichia coliBacteriaRF00005Recognition of the amber stop codon by release factor RF1.X-ray diffraction3.622014-07-09
1554V7L|1|AXTransfer RNAtRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliBacteriaRF00005The structures of viomycin bound to the 70S ribosome.X-ray diffraction32014-07-09
1565D8B|1|BDTransfer RNAtRNAEscherichia coliBacteriaRF00005Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.632015-10-14
1574V7P|1|DWTransfer RNAP-site tRNA-fMet, messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')Escherichia coliBacteriaRF00005Recognition of the amber stop codon by release factor RF1.X-ray diffraction3.622014-07-09
1585D8B|1|XCTransfer RNAtRNAEscherichia coliBacteriaRF00005Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.632015-10-14
1591VY4|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
1601VY7|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
1614WZO|1|1KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.32015-06-10
1624WZO|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.32015-06-10
1635IB7|1|2LTransfer RNAtRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-ray diffraction2.992016-05-25
1645E7K|1|2LTransfer RNAtRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-ray diffraction3.22016-01-27
1655IB8|1|2LTransfer RNAtRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-ray diffraction3.132016-05-25
1662FMT|1|CTransfer RNAFORMYL-METHIONYL-TRNAFMET2synthetic constructSyntheticRF00005METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-ray diffraction2.81999-07-29
1672FMT|1|DTransfer RNAFORMYL-METHIONYL-TRNAFMET2synthetic constructSyntheticRF00005METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-ray diffraction2.81999-07-29
1684V5C|1|CVTransfer RNAP-SITE TRNA FMET, MRNAEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.32014-07-09
1694WRA|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-ray diffraction3.052015-06-10
1703J9Y|1|vTransfer RNAP-site fMet-tRNAfMet, mRNAEscherichia coliBacteriaRF00005Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeElectron microscopy3.92015-04-15
1715AFI|1|vTransfer RNAP-site fMet-tRNAfMet, mRNAEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
1725KPW|1|32Transfer RNAE-site tRNAfMetEscherichia coliBacteriaRF00005Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)Electron microscopy3.92016-09-28
1734V8F|1|BCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-ray diffraction3.32014-07-09
1744V6G|1|CDTransfer RNATRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
1755EL4|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-ray diffraction3.152016-01-27
1764WRO|1|2LTransfer RNAtRNA-fMet, RNA (30-MER)Escherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
1775IQR|1|5Transfer RNAP-site fMet-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structure of RelA bound to the 70S ribosomeElectron microscopy32016-05-04
1785J4D|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-ray diffraction3.12016-05-18
1795J4D|1|IBTransfer RNAtRNAEscherichia coliBacteriaRF00005E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-ray diffraction3.12016-05-18
1805L3P|1|xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexElectron microscopy3.72016-07-20
1814V8J|1|AVTransfer RNAtRNA-fMet, tRNA-Phe, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G347U.X-ray diffraction3.92014-07-09
1824V5K|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
1835EL5|1|2LTransfer RNAtRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-ray diffraction3.152016-01-27
1844WQR|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.152015-06-10
1854WT1|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
1865EL7|1|2LTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-ray diffraction3.152016-01-27
1874YPB|1|QWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.42015-10-21
1884W4G|1|QWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.32015-10-21
1894W4G|1|XWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.32015-10-21
1904YPB|1|XWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.42015-10-21
1914WR6|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-ray diffraction3.052015-06-10
1923JCJ|1|vTransfer RNAtRNA, messenger RNAEscherichia coliBacteriaRF00005Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationElectron microscopy3.72016-03-09
1934V6G|1|ADTransfer RNATRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
1944V7L|1|CXTransfer RNAtRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliBacteriaRF00005The structures of viomycin bound to the 70S ribosome.X-ray diffraction32014-07-09
1954V5F|1|AWTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.62014-07-09
1964V8Q|1|BWTransfer RNAE-SITE or P-SITE TRNA FMETEscherichia coliBacteriaRF00005Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-ray diffraction3.12014-07-09
1974V8O|1|AVTransfer RNAPE HYBRID STATE TRNA FMET, MRNA 5'-R(*AP*AP*AP*AP*AP*AP*UP*GP*UP)-3'Escherichia coliBacteriaRF00005Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3X-ray diffraction3.82014-07-09
1984V8C|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
1994V8B|1|ADTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
2004V87|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
2014V8C|1|DDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
2024V87|1|BDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
2034V8B|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
2045AFI|1|wTransfer RNAP-site fMet-tRNAfMetEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
2053QSY|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-ray diffraction3.22012-03-21
2064V5K|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
2074V5K|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09

Release history

Release2.95
Date2016-09-30

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15EL5|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-RAY DIFFRACTION3.1572
25E7K|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-RAY DIFFRACTION3.272
35EL6|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-RAY DIFFRACTION3.172
45EL7|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-RAY DIFFRACTION3.1572
54WZO|1|2KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.372
64WQR|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1572
74WRA|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.0573
84WQ1|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.172
94WR6|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.0572
105EL4|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-RAY DIFFRACTION3.1571
114WZO|1|2LComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.373
125IB8|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-RAY DIFFRACTION3.1372
135E7K|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-RAY DIFFRACTION3.272
145EL6|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-RAY DIFFRACTION3.172
154WSD|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9572
164WT1|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
174WRO|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
185EL7|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-RAY DIFFRACTION3.1572
195IB7|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.9972
205IBB|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.9671
215EL5|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-RAY DIFFRACTION3.1572
224WRA|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.0573
234V8D|1|ACStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
244V8F|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
254V8E|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
264V8E|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
274V8F|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
284V8D|1|CCStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
294WSD|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9572
304WR6|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.0571
314WRO|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
324WQ1|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.172
335IBB|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.9672
345EL4|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-RAY DIFFRACTION3.1572
355IB8|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-RAY DIFFRACTION3.1372
365IB7|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.9972
374WT1|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
384WQR|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1572
394V8B|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
404V87|1|CCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
414V8C|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
424V8C|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
434V87|1|BCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
444V8B|1|ACCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
454V6G|1|CCInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
465HCQ|1|2xCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
474Z8C|1|2xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.972
485HCP|1|2xCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8972
495HCR|1|2xCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
505HD1|1|2xCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.772
515HD1|1|1xCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.772
525HCR|1|1xCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
535HCP|1|1xCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8972
545HCQ|1|1xCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
554Z8C|1|1xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.972
565HAU|1|2wCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION372
575HAU|1|1wCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION372
585DOY|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.671
594Z3S|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6571
604W2I|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.772
614WQY|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.872
624WPO|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.871
634V9S|1|AXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
644V9R|1|AXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
654W2G|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5572
661VY4|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.671
671VY5|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5572
681VY6|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.971
691VY7|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.871
704W2F|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
715J4C|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.872
725J4B|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.672
734Y4P|1|1xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.572
744W2H|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.772
755F8K|1|1xCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
764ZER|1|1xCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.172
774ZER|1|2xCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.172
785F8K|1|2xCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
795J4D|1|IAE. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-RAY DIFFRACTION3.173
805J4D|1|NCE. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-RAY DIFFRACTION3.173
814V5K|1|AVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
823J9Y|1|vCryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.973
835AFI|1|v2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.973
845L3P|1|xCryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexELECTRON MICROSCOPY3.773
854V5C|1|CVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
865KPX|1|31Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)ELECTRON MICROSCOPY3.977
875KPS|1|31Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)ELECTRON MICROSCOPY3.977
885KPW|1|31Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)ELECTRON MICROSCOPY3.977
893JCE|1|8Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.277
904P70|1|QVCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.6877
914TUA|1|QVCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
924TUD|1|QVCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
934P70|1|XVCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.6877
944TUA|1|XVCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
954V7M|1|AXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
964V7M|1|CXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
974V5C|1|AVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
984V7L|1|AXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
994V7L|1|CXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
1004TUC|1|QVCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
1014TUB|1|XVCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
1024W2I|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.772
1035DOY|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.671
1044W2H|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.772
1054V9R|1|CXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
1064V9S|1|CXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
1074W2G|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5572
1084W2F|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
1091VY5|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5572
1101VY4|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.671
1114WPO|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.871
1124WQY|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.872
1131VY6|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.971
1144Y4P|1|2xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.572
1155J4B|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.672
1165J4C|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.872
1174Z3S|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6571
1181VY7|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.871
1194V6A|1|AWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
1204ZSN|1|QV70S-wild-type HigB toxin complex bound to a AAA lysine codonX-RAY DIFFRACTION3.677
1214YZV|1|QVPrecleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-RAY DIFFRACTION3.177
1224W4G|1|QVPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
1234YPB|1|QVPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
1244V8Q|1|BVComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
1255D8B|1|FDCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.6377
1265D8B|1|EDCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.6377
1274P6F|1|XVCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.677
1284LNT|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
1294LT8|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
1304L71|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.977
1314LFZ|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.9277
1324LSK|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
1334LFZ|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.9277
1341VVJ|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
1354L71|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.977
1364LEL|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.977
1374LEL|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.977
1384LSK|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
1391VVJ|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
1404LNT|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
1414P6F|1|QVCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.677
1424TUB|1|QVCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
1434LT8|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
1444V9I|1|CVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
1454V51|1|AVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
1464V51|1|CVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
1474V9I|1|AVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
1484V5F|1|CVThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
1494V5F|1|AVThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
1504V5K|1|CVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
1514V6A|1|CWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
1524TUC|1|XVCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
1534TUD|1|XVCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
1544YZV|1|XVPrecleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-RAY DIFFRACTION3.177
1554ZSN|1|XV70S-wild-type HigB toxin complex bound to a AAA lysine codonX-RAY DIFFRACTION3.677
1564YPB|1|XVPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
1574W4G|1|XVPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
1584V67|1|CYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1594V67|1|AYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1604V63|1|CYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1614V63|1|AYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1624V7P|1|AWRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.6277
1634V7P|1|DWRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.6277
1644V8J|1|CVCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.977
1654V97|1|CVCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.5277
1664V97|1|AVCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.5277
1674V8J|1|AVCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.977
1684V6G|1|ACInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
1695IQR|1|5Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY372
1704WZO|1|1KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.368
1714V6G|1|CBInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.565
1724V5F|1|CWThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
1734V5F|1|AWThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
1745J4D|1|DE. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-RAY DIFFRACTION3.173
1755J4D|1|IBE. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-RAY DIFFRACTION3.173
1764V8Q|1|BWComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
1774V63|1|CZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1784V63|1|AZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1794V67|1|AZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1804V67|1|CZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1815D8B|1|XCCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.6377
1825D8B|1|BDCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.6377
1834V6G|1|CDInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
1844W4G|1|XWPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
1854YPB|1|XWPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
1864YPB|1|QWPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
1874W4G|1|QWPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
1884V8B|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
1894V87|1|CDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
1904V8C|1|DDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
1914V8C|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
1924V8B|1|ADCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
1934V87|1|BDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
1944V6G|1|ADInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
1954V5K|1|CWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
1964V5K|1|AWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
1975KPW|1|32Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)ELECTRON MICROSCOPY3.977
1985KPS|1|32Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)ELECTRON MICROSCOPY3.977
1995KPX|1|32Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)ELECTRON MICROSCOPY3.977
2005AFI|1|w2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.973
2014V8O|1|AVCrystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3X-RAY DIFFRACTION3.877
2023CW5|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.172
2033CW6|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.372
2042FMT|1|DMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.872
2052FMT|1|CMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.872
2063JCJ|1|vStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.773
2073QSY|1|DRecognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-RAY DIFFRACTION3.277