1 | 4V9R|1|AX (rep) | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome | X-ray diffraction | 3 | 2014-07-09 |
2 | 4V9S|1|AX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antibiotic GE82832 bound to 70S ribosome | X-ray diffraction | 3.1 | 2014-07-09 |
3 | 4TUD|1|QV | Transfer RNA | P-site tRNA-fMet, A-site ASL-SufJ, messenger RNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome | X-ray diffraction | 3.6 | 2015-05-13 |
4 | 4TUA|1|QV | Transfer RNA | P-site tRNA-fMet, A-site ASL-Thr, messenger RNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome | X-ray diffraction | 3.6 | 2015-05-13 |
5 | 4P70|1|XV | Transfer RNA | P-site tRNA fMET, mRNA, A site ASL of tRNA-Proline CGG (unmodified) | Escherichia coli | Bacteria | RF00005 | Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome | X-ray diffraction | 3.68 | 2014-08-13 |
6 | 4V5F|1|AV | Transfer RNA | E-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNA | Escherichia coli | Bacteria | RF00005 | The structure of the ribosome with elongation factor G trapped in the post-translocational state | X-ray diffraction | 3.6 | 2014-07-09 |
7 | 4V9S|1|CX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antibiotic GE82832 bound to 70S ribosome | X-ray diffraction | 3.1 | 2014-07-09 |
8 | 4V9R|1|CX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome | X-ray diffraction | 3 | 2014-07-09 |
9 | 3JCE|1|8 | Transfer RNA | tRNA, mRNA | synthetic construct | Synthetic | RF00005 | Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4) | Electron microscopy | 3.2 | 2016-01-13 |
10 | 4V7M|1|AX | Transfer RNA | tRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3') | Escherichia coli | Bacteria | RF00005 | The structures of Capreomycin bound to the 70S ribosome. | X-ray diffraction | 3.45 | 2014-07-09 |
11 | 4V63|1|AY | Transfer RNA | P and E-site tRNA(fMet), mRNA | Escherichia coli | Bacteria | RF00005 | Structural basis for translation termination on the 70S ribosome. | X-ray diffraction | 3.21 | 2014-07-09 |
12 | 4V67|1|AY | Transfer RNA | P AND E-SITE TRNA(FMET), MRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of a translation termination complex formed with release factor RF2. | X-ray diffraction | 3 | 2014-07-09 |
13 | 4V87|1|BC | Transfer RNA | TRNA-FMET, MRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding. | X-ray diffraction | 3.1 | 2014-07-09 |
14 | 4V8F|1|CC | Transfer RNA | TRNA-FMET, MRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin). | X-ray diffraction | 3.3 | 2014-07-09 |
15 | 4V9I|1|CV | Transfer RNA | P-SITE tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon | X-ray diffraction | 3.3 | 2014-07-09 |
16 | 4V6A|1|CW | Transfer RNA | tRNA-Met, RNA (5'-R(P*AP*AP*AP*UP*G)-3') | Escherichia coli | Bacteria | RF00005 | Structure of EF-P bound to the 70S ribosome. | X-ray diffraction | 3.1 | 2014-07-09 |
17 | 4V63|1|CY | Transfer RNA | P and E-site tRNA(fMet), mRNA | Escherichia coli | Bacteria | RF00005 | Structural basis for translation termination on the 70S ribosome. | X-ray diffraction | 3.21 | 2014-07-09 |
18 | 4V67|1|CY | Transfer RNA | P AND E-SITE TRNA(FMET), MRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of a translation termination complex formed with release factor RF2. | X-ray diffraction | 3 | 2014-07-09 |
19 | 4V8C|1|DC | Transfer RNA | TRNA-FMET, MRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin). | X-ray diffraction | 3.3 | 2014-07-09 |
20 | 4YZV|1|QV | Transfer RNA | P-site tRNA-fMet, messenger RNA | Escherichia coli | Bacteria | RF00005 | Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon | X-ray diffraction | 3.1 | 2015-10-21 |
21 | 4TUB|1|QV | Transfer RNA | P-site tRNA f-Met, A-site tRNA Thr, messenger RNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome | X-ray diffraction | 3.6 | 2015-05-13 |
22 | 4TUB|1|XV | Transfer RNA | P-site tRNA f-Met, A-site tRNA Thr, messenger RNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome | X-ray diffraction | 3.6 | 2015-05-13 |
23 | 4TUD|1|XV | Transfer RNA | P-site tRNA-fMet, A-site ASL-SufJ, messenger RNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome | X-ray diffraction | 3.6 | 2015-05-13 |
24 | 4V5F|1|CV | Transfer RNA | E-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNA | Escherichia coli | Bacteria | RF00005 | The structure of the ribosome with elongation factor G trapped in the post-translocational state | X-ray diffraction | 3.6 | 2014-07-09 |
25 | 4Z3S|1|1x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution | X-ray diffraction | 2.65 | 2015-06-03 |
26 | 5DOY|1|2x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution | X-ray diffraction | 2.6 | 2015-12-30 |
27 | 5KPS|1|31 | Transfer RNA | P site tRNAfmet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I) | Electron microscopy | 3.9 | 2016-09-28 |
28 | 5KPW|1|31 | Transfer RNA | P-site tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III) | Electron microscopy | 3.9 | 2016-09-28 |
29 | 5KPS|1|32 | Transfer RNA | E-site tRNAfMet | Escherichia coli | Bacteria | RF00005 | Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I) | Electron microscopy | 3.9 | 2016-09-28 |
30 | 4V8B|1|AC | Transfer RNA | TRNA-FMET, MRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-ray diffraction | 3 | 2014-07-09 |
31 | 4V67|1|AZ | Transfer RNA | P AND E-SITE TRNA(FMET) | Escherichia coli | Bacteria | RF00005 | Crystal structure of a translation termination complex formed with release factor RF2. | X-ray diffraction | 3 | 2014-07-09 |
32 | 4V63|1|AZ | Transfer RNA | P and E-site tRNA(fMet) | Escherichia coli | Bacteria | RF00005 | Structural basis for translation termination on the 70S ribosome. | X-ray diffraction | 3.21 | 2014-07-09 |
33 | 4V8E|1|BC | Transfer RNA | TRNA-FMET, MRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex). | X-ray diffraction | 3.3 | 2014-07-09 |
34 | 4V8Q|1|BV | Transfer RNA | E-SITE or P-SITE TRNA FMET, MRNA | Escherichia coli | Bacteria | RF00005 | Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome | X-ray diffraction | 3.1 | 2014-07-09 |
35 | 4V8B|1|CC | Transfer RNA | TRNA-FMET, MRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-ray diffraction | 3 | 2014-07-09 |
36 | 4V6G|1|CC | Transfer RNA | TRNA FMET (UNMODIFIED BASES), MRNA | Escherichia coli | Bacteria | RF00005 | Initiation complex of 70S ribosome with two tRNAs and mRNA. | X-ray diffraction | 3.5 | 2014-07-09 |
37 | 4V8C|1|CC | Transfer RNA | TRNA-FMET, MRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin). | X-ray diffraction | 3.3 | 2014-07-09 |
38 | 4V8J|1|CV | Transfer RNA | tRNA-fMet, tRNA-Phe, messenger RNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the bacterial ribosome ram mutation G347U. | X-ray diffraction | 3.9 | 2014-07-09 |
39 | 4V63|1|CZ | Transfer RNA | P and E-site tRNA(fMet) | Escherichia coli | Bacteria | RF00005 | Structural basis for translation termination on the 70S ribosome. | X-ray diffraction | 3.21 | 2014-07-09 |
40 | 4V67|1|CZ | Transfer RNA | P AND E-SITE TRNA(FMET) | Escherichia coli | Bacteria | RF00005 | Crystal structure of a translation termination complex formed with release factor RF2. | X-ray diffraction | 3 | 2014-07-09 |
41 | 4V8E|1|DC | Transfer RNA | TRNA-FMET, MRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex). | X-ray diffraction | 3.3 | 2014-07-09 |
42 | 5D8B|1|ED | Transfer RNA | tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch | X-ray diffraction | 3.63 | 2015-10-14 |
43 | 5D8B|1|FD | Transfer RNA | tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch | X-ray diffraction | 3.63 | 2015-10-14 |
44 | 4TUC|1|QV | Transfer RNA | P-site tRNA fMet, A-site ASL-SufJ, messenger RNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome | X-ray diffraction | 3.6 | 2015-05-13 |
45 | 4ZSN|1|QV | Transfer RNA | P-site tRNA-fMet, messenger RNA | Escherichia coli | Bacteria | RF00005 | 70S-wild-type HigB toxin complex bound to a AAA lysine codon | X-ray diffraction | 3.6 | 2016-09-07 |
46 | 4P70|1|QV | Transfer RNA | P-site tRNA fMET, mRNA, A site ASL of tRNA-Proline CGG (unmodified) | Escherichia coli | Bacteria | RF00005 | Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome | X-ray diffraction | 3.68 | 2014-08-13 |
47 | 4LT8|1|QV | Transfer RNA | P-site tRNA fMet, messenger RNA, A-site ASL Pro | Escherichia coli | Bacteria | RF00005 | Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome | X-ray diffraction | 3.14 | 2014-08-06 |
48 | 4LNT|1|XV | Transfer RNA | P-site tRNA fMet, messenger RNA, A-site ASL SufA6 | Escherichia coli | Bacteria | RF00005 | Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome | X-ray diffraction | 2.94 | 2014-08-06 |
49 | 4W4G|1|XV | Transfer RNA | tRNA fMet, messenger RNA | Escherichia coli | Bacteria | RF00005 | Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon | X-ray diffraction | 3.3 | 2015-10-21 |
50 | 4P6F|1|XV | Transfer RNA | tRNA-fMet, E-Site tRNA-Phe or A-Site tRNA-Phe, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the peptolide 12C bound to bacterial ribosome | X-ray diffraction | 3.6 | 2014-10-01 |
51 | 4LT8|1|XV | Transfer RNA | P-site tRNA fMet, messenger RNA, A-site ASL Pro | Escherichia coli | Bacteria | RF00005 | Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome | X-ray diffraction | 3.14 | 2014-08-06 |
52 | 4YZV|1|XV | Transfer RNA | P-site tRNA-fMet, messenger RNA | Escherichia coli | Bacteria | RF00005 | Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon | X-ray diffraction | 3.1 | 2015-10-21 |
53 | 5HCQ|1|1x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-04-06 |
54 | 5HCR|1|1x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-04-06 |
55 | 5HCP|1|1x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.89 | 2016-04-06 |
56 | 4Y4P|1|1x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution | X-ray diffraction | 2.5 | 2015-03-18 |
57 | 4WRO|1|2K | Transfer RNA | tRNA-fMet, RNA (30-MER) | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site | X-ray diffraction | 3.05 | 2015-06-10 |
58 | 4Y4P|1|2x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution | X-ray diffraction | 2.5 | 2015-03-18 |
59 | 4Z8C|1|2x | Transfer RNA | Initiator Methionine tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin | X-ray diffraction | 2.9 | 2015-05-20 |
60 | 3CW5|1|A | Transfer RNA | Initiator tRNA | Escherichia coli | Bacteria | RF00005 | E. coli Initiator tRNA | X-ray diffraction | 3.1 | 2008-09-02 |
61 | 4W2I|1|AX | Transfer RNA | E-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.7 | 2014-10-15 |
62 | 4W2G|1|AX | Transfer RNA | E-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.55 | 2014-10-15 |
63 | 4W2F|1|AX | Transfer RNA | E-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.4 | 2014-10-15 |
64 | 1VY5|1|AX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site. | X-ray diffraction | 2.55 | 2014-08-20 |
65 | 4W2H|1|AX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site | X-ray diffraction | 2.7 | 2014-10-15 |
66 | 4W2I|1|CX | Transfer RNA | E-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.7 | 2014-10-15 |
67 | 4W2G|1|CX | Transfer RNA | E-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.55 | 2014-10-15 |
68 | 4W2F|1|CX | Transfer RNA | E-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.4 | 2014-10-15 |
69 | 1VY5|1|CX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site. | X-ray diffraction | 2.55 | 2014-08-20 |
70 | 4V5C|1|AV | Transfer RNA | P-SITE TRNA FMET, MRNA | Escherichia coli | Bacteria | RF00005 | Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA. | X-ray diffraction | 3.3 | 2014-07-09 |
71 | 5DOY|1|1x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution | X-ray diffraction | 2.6 | 2015-12-30 |
72 | 5IBB|1|2L | Transfer RNA | tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site | X-ray diffraction | 2.96 | 2016-05-25 |
73 | 4Z3S|1|2x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution | X-ray diffraction | 2.65 | 2015-06-03 |
74 | 1VY6|1|AX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site. | X-ray diffraction | 2.9 | 2014-08-20 |
75 | 1VY4|1|AX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites. | X-ray diffraction | 2.6 | 2014-08-20 |
76 | 1VY7|1|AX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site. | X-ray diffraction | 2.8 | 2014-08-20 |
77 | 1VY6|1|CX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site. | X-ray diffraction | 2.9 | 2014-08-20 |
78 | 4WPO|1|DX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state | X-ray diffraction | 2.8 | 2015-01-28 |
79 | 5KPX|1|31 | Transfer RNA | P-site tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV) | Electron microscopy | 3.9 | 2016-09-28 |
80 | 4V8D|1|AC | Transfer RNA | TRNA-FMET, MRNA | Escherichia coli | Bacteria | RF00005 | Structure analysis of ribosomal decoding (cognate tRNA-tyr complex). | X-ray diffraction | 3 | 2014-07-09 |
81 | 4V9I|1|AV | Transfer RNA | P-SITE tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon | X-ray diffraction | 3.3 | 2014-07-09 |
82 | 4V6A|1|AW | Transfer RNA | tRNA-Met, RNA (5'-R(P*AP*AP*AP*UP*G)-3') | Escherichia coli | Bacteria | RF00005 | Structure of EF-P bound to the 70S ribosome. | X-ray diffraction | 3.1 | 2014-07-09 |
83 | 4V87|1|CC | Transfer RNA | TRNA-FMET, MRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding. | X-ray diffraction | 3.1 | 2014-07-09 |
84 | 4V7M|1|CX | Transfer RNA | RNA (77-MER), RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3') | Escherichia coli | Bacteria | RF00005 | The structures of Capreomycin bound to the 70S ribosome. | X-ray diffraction | 3.45 | 2014-07-09 |
85 | 4YPB|1|QV | Transfer RNA | tRNA fMet, messenger RNA | Escherichia coli | Bacteria | RF00005 | Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon | X-ray diffraction | 3.4 | 2015-10-21 |
86 | 4LNT|1|QV | Transfer RNA | P-site tRNA fMet, messenger RNA, A-site ASL SufA6 | Escherichia coli | Bacteria | RF00005 | Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome | X-ray diffraction | 2.94 | 2014-08-06 |
87 | 4P6F|1|QV | Transfer RNA | tRNA-fMet, E-Site tRNA-Phe or A-Site tRNA-Phe, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the peptolide 12C bound to bacterial ribosome | X-ray diffraction | 3.6 | 2014-10-01 |
88 | 4TUC|1|XV | Transfer RNA | P-site tRNA fMet, A-site ASL-SufJ, messenger RNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome | X-ray diffraction | 3.6 | 2015-05-13 |
89 | 4TUA|1|XV | Transfer RNA | P-site tRNA-fMet, A-site ASL-Thr, messenger RNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome | X-ray diffraction | 3.6 | 2015-05-13 |
90 | 4ZSN|1|XV | Transfer RNA | P-site tRNA-fMet, messenger RNA | Escherichia coli | Bacteria | RF00005 | 70S-wild-type HigB toxin complex bound to a AAA lysine codon | X-ray diffraction | 3.6 | 2016-09-07 |
91 | 4YPB|1|XV | Transfer RNA | tRNA fMet, messenger RNA | Escherichia coli | Bacteria | RF00005 | Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon | X-ray diffraction | 3.4 | 2015-10-21 |
92 | 5HAU|1|1w | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 3 | 2016-04-06 |
93 | 4Z8C|1|1x | Transfer RNA | Initiator Methionine tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin | X-ray diffraction | 2.9 | 2015-05-20 |
94 | 5J4B|1|1x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution | X-ray diffraction | 2.6 | 2016-04-27 |
95 | 4ZER|1|1x | Transfer RNA | tRNA met, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 3.1 | 2015-05-20 |
96 | 5HD1|1|1x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.7 | 2016-04-06 |
97 | 5IB7|1|2K | Transfer RNA | tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin | X-ray diffraction | 2.99 | 2016-05-25 |
98 | 5EL4|1|2K | Transfer RNA | tRNA-fMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position | X-ray diffraction | 3.15 | 2016-01-27 |
99 | 4WQR|1|2K | Transfer RNA | tRNA-fMet, mRNA | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site. | X-ray diffraction | 3.15 | 2015-06-10 |
100 | 4WT1|1|2K | Transfer RNA | tRNA-fMet, mRNA | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site | X-ray diffraction | 3.05 | 2015-06-10 |
101 | 4WSD|1|2K | Transfer RNA | tRNA-fMet, mRNA | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin. | X-ray diffraction | 2.95 | 2015-06-10 |
102 | 5EL6|1|2K | Transfer RNA | E. coli tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycin | X-ray diffraction | 3.1 | 2016-01-27 |
103 | 5EL7|1|2K | Transfer RNA | E. coli tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin | X-ray diffraction | 3.15 | 2016-01-27 |
104 | 5IBB|1|2K | Transfer RNA | tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site | X-ray diffraction | 2.96 | 2016-05-25 |
105 | 5HAU|1|2w | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 3 | 2016-04-06 |
106 | 5J4C|1|2x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution | X-ray diffraction | 2.8 | 2016-04-27 |
107 | 4ZER|1|2x | Transfer RNA | tRNA met, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 3.1 | 2015-05-20 |
108 | 5HCR|1|2x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-04-06 |
109 | 5HD1|1|2x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.7 | 2016-04-06 |
110 | 5HCP|1|2x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.89 | 2016-04-06 |
111 | 5J4B|1|2x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution | X-ray diffraction | 2.6 | 2016-04-27 |
112 | 5HCQ|1|2x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-04-06 |
113 | 3CW6|1|A | Transfer RNA | Initiator tRNA | Escherichia coli | Bacteria | RF00005 | E. coli Initiator tRNA | X-ray diffraction | 3.3 | 2008-09-02 |
114 | 4WQY|1|BX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid) | X-ray diffraction | 2.8 | 2015-01-28 |
115 | 5KPX|1|32 | Transfer RNA | E-site tRNAfMet | Escherichia coli | Bacteria | RF00005 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV) | Electron microscopy | 3.9 | 2016-09-28 |
116 | 4V8D|1|CC | Transfer RNA | TRNA-FMET, MRNA | Escherichia coli | Bacteria | RF00005 | Structure analysis of ribosomal decoding (cognate tRNA-tyr complex). | X-ray diffraction | 3 | 2014-07-09 |
117 | 4V97|1|CV | Transfer RNA | P-SITE tRNA fMet, E-SITE TRNA PHE OR A-SITE tRNA Phe, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the bacterial ribosome ram mutation G299A. | X-ray diffraction | 3.52 | 2014-07-09 |
118 | 4LSK|1|QV | Transfer RNA | P-site tRNA fMet, messenger RNA, A-site ASL SufA6 | Escherichia coli | Bacteria | RF00005 | Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome | X-ray diffraction | 3.48 | 2014-08-06 |
119 | 4L71|1|QV | Transfer RNA | P-site tRNA fMet, messenger RNA, A-site ASL SufA6 | Escherichia coli | Bacteria | RF00005 | Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome | X-ray diffraction | 3.9 | 2014-08-06 |
120 | 4LEL|1|QV | Transfer RNA | P-site tRNA fMet, messenger RNA, A-site ASL SufA6 | Escherichia coli | Bacteria | RF00005 | Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome | X-ray diffraction | 3.9 | 2014-08-06 |
121 | 1VVJ|1|QV | Transfer RNA | P-site tRNA fMet, messenger RNA, A-site ASL SufA6 | Escherichia coli | Bacteria | RF00005 | Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome | X-ray diffraction | 3.44 | 2014-08-06 |
122 | 4W4G|1|QV | Transfer RNA | tRNA fMet, messenger RNA | Escherichia coli | Bacteria | RF00005 | Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon | X-ray diffraction | 3.3 | 2015-10-21 |
123 | 4LFZ|1|QV | Transfer RNA | P-site tRNA fMet, messenger RNA, A-site ASL SufA6 | Escherichia coli | Bacteria | RF00005 | Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin | X-ray diffraction | 3.92 | 2014-08-06 |
124 | 4LFZ|1|XV | Transfer RNA | P-site tRNA fMet, messenger RNA, A-site ASL SufA6 | Escherichia coli | Bacteria | RF00005 | Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin | X-ray diffraction | 3.92 | 2014-08-06 |
125 | 4LEL|1|XV | Transfer RNA | P-site tRNA fMet, messenger RNA, A-site ASL SufA6 | Escherichia coli | Bacteria | RF00005 | Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome | X-ray diffraction | 3.9 | 2014-08-06 |
126 | 4LSK|1|XV | Transfer RNA | P-site tRNA fMet, messenger RNA, A-site ASL SufA6 | Escherichia coli | Bacteria | RF00005 | Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome | X-ray diffraction | 3.48 | 2014-08-06 |
127 | 4L71|1|XV | Transfer RNA | P-site tRNA fMet, messenger RNA, A-site ASL SufA6 | Escherichia coli | Bacteria | RF00005 | Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome | X-ray diffraction | 3.9 | 2014-08-06 |
128 | 1VVJ|1|XV | Transfer RNA | P-site tRNA fMet, messenger RNA, A-site ASL SufA6 | Escherichia coli | Bacteria | RF00005 | Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome | X-ray diffraction | 3.44 | 2014-08-06 |
129 | 4WR6|1|2K | Transfer RNA | tRNA-fMet, mRNA | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site. | X-ray diffraction | 3.05 | 2015-06-10 |
130 | 4WPO|1|BX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state | X-ray diffraction | 2.8 | 2015-01-28 |
131 | 4V6G|1|CB | Transfer RNA | TRNA FMET (UNMODIFIED BASES), MRNA | Escherichia coli | Bacteria | RF00005 | Initiation complex of 70S ribosome with two tRNAs and mRNA. | X-ray diffraction | 3.5 | 2014-07-09 |
132 | 5F8K|1|1x | Transfer RNA | tRNAiMet, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-02-03 |
133 | 5J4C|1|1x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution | X-ray diffraction | 2.8 | 2016-04-27 |
134 | 5EL5|1|2K | Transfer RNA | tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position | X-ray diffraction | 3.15 | 2016-01-27 |
135 | 4WQ1|1|2K | Transfer RNA | tRNA-fMET, mRNA | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site. | X-ray diffraction | 3.1 | 2015-06-10 |
136 | 5E7K|1|2K | Transfer RNA | tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site | X-ray diffraction | 3.2 | 2016-01-27 |
137 | 5IB8|1|2K | Transfer RNA | tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-site | X-ray diffraction | 3.13 | 2016-05-25 |
138 | 4WQ1|1|2L | Transfer RNA | tRNA-fMET, mRNA | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site. | X-ray diffraction | 3.1 | 2015-06-10 |
139 | 4WSD|1|2L | Transfer RNA | tRNA-fMet, mRNA | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin. | X-ray diffraction | 2.95 | 2015-06-10 |
140 | 5EL6|1|2L | Transfer RNA | E. coli tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycin | X-ray diffraction | 3.1 | 2016-01-27 |
141 | 5F8K|1|2x | Transfer RNA | tRNAiMet, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-02-03 |
142 | 4W2H|1|CX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site | X-ray diffraction | 2.7 | 2014-10-15 |
143 | 4WQY|1|DX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid) | X-ray diffraction | 2.8 | 2015-01-28 |
144 | 4V51|1|AV | Transfer RNA | P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA | Escherichia coli | Bacteria | RF00005 | Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin | X-ray diffraction | 2.8 | 2014-07-09 |
145 | 4V51|1|CV | Transfer RNA | P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA | Escherichia coli | Bacteria | RF00005 | Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin | X-ray diffraction | 2.8 | 2014-07-09 |
146 | 4V5F|1|CW | Transfer RNA | E-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54) | Escherichia coli | Bacteria | RF00005 | The structure of the ribosome with elongation factor G trapped in the post-translocational state | X-ray diffraction | 3.6 | 2014-07-09 |
147 | 4WRA|1|2L | Transfer RNA | tRNA-fMet, mRNA | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin. | X-ray diffraction | 3.05 | 2015-06-10 |
148 | 4WZO|1|2L | Transfer RNA | tRNA-fMet, mRNA | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-fMet and mRNA | X-ray diffraction | 3.3 | 2015-06-10 |
149 | 5J4D|1|IA | Transfer RNA | tRNA | Escherichia coli | Bacteria | RF00005 | E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon | X-ray diffraction | 3.1 | 2016-05-18 |
150 | 5J4D|1|NC | Transfer RNA | tRNA | Escherichia coli | Bacteria | RF00005 | E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon | X-ray diffraction | 3.1 | 2016-05-18 |
151 | 4V6G|1|AC | Transfer RNA | TRNA FMET (UNMODIFIED BASES), MRNA | Escherichia coli | Bacteria | RF00005 | Initiation complex of 70S ribosome with two tRNAs and mRNA. | X-ray diffraction | 3.5 | 2014-07-09 |
152 | 4V5K|1|AV | Transfer RNA | E-SITE TRNA PHE OR P-SITE TRNA PHE, MRNA | Escherichia coli | Bacteria | RF00005 | Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome | X-ray diffraction | 3.2 | 2014-07-09 |
153 | 4V97|1|AV | Transfer RNA | P-SITE tRNA fMet, E-SITE TRNA PHE OR A-SITE tRNA Phe, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the bacterial ribosome ram mutation G299A. | X-ray diffraction | 3.52 | 2014-07-09 |
154 | 4V7P|1|AW | Transfer RNA | P-site tRNA-fMet, messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3') | Escherichia coli | Bacteria | RF00005 | Recognition of the amber stop codon by release factor RF1. | X-ray diffraction | 3.62 | 2014-07-09 |
155 | 4V7L|1|AX | Transfer RNA | tRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3') | Escherichia coli | Bacteria | RF00005 | The structures of viomycin bound to the 70S ribosome. | X-ray diffraction | 3 | 2014-07-09 |
156 | 5D8B|1|BD | Transfer RNA | tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch | X-ray diffraction | 3.63 | 2015-10-14 |
157 | 4V7P|1|DW | Transfer RNA | P-site tRNA-fMet, messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3') | Escherichia coli | Bacteria | RF00005 | Recognition of the amber stop codon by release factor RF1. | X-ray diffraction | 3.62 | 2014-07-09 |
158 | 5D8B|1|XC | Transfer RNA | tRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch | X-ray diffraction | 3.63 | 2015-10-14 |
159 | 1VY4|1|CX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites. | X-ray diffraction | 2.6 | 2014-08-20 |
160 | 1VY7|1|CX | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site. | X-ray diffraction | 2.8 | 2014-08-20 |
161 | 4WZO|1|1K | Transfer RNA | tRNA-fMet, mRNA | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-fMet and mRNA | X-ray diffraction | 3.3 | 2015-06-10 |
162 | 4WZO|1|2K | Transfer RNA | tRNA-fMet, mRNA | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-fMet and mRNA | X-ray diffraction | 3.3 | 2015-06-10 |
163 | 5IB7|1|2L | Transfer RNA | tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin | X-ray diffraction | 2.99 | 2016-05-25 |
164 | 5E7K|1|2L | Transfer RNA | tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site | X-ray diffraction | 3.2 | 2016-01-27 |
165 | 5IB8|1|2L | Transfer RNA | tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-site | X-ray diffraction | 3.13 | 2016-05-25 |
166 | 2FMT|1|C | Transfer RNA | FORMYL-METHIONYL-TRNAFMET2 | synthetic construct | Synthetic | RF00005 | METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET | X-ray diffraction | 2.8 | 1999-07-29 |
167 | 2FMT|1|D | Transfer RNA | FORMYL-METHIONYL-TRNAFMET2 | synthetic construct | Synthetic | RF00005 | METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET | X-ray diffraction | 2.8 | 1999-07-29 |
168 | 4V5C|1|CV | Transfer RNA | P-SITE TRNA FMET, MRNA | Escherichia coli | Bacteria | RF00005 | Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA. | X-ray diffraction | 3.3 | 2014-07-09 |
169 | 4WRA|1|2K | Transfer RNA | tRNA-fMet, mRNA | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin. | X-ray diffraction | 3.05 | 2015-06-10 |
170 | 3J9Y|1|v | Transfer RNA | P-site fMet-tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome | Electron microscopy | 3.9 | 2015-04-15 |
171 | 5AFI|1|v | Transfer RNA | P-site fMet-tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM | Electron microscopy | 2.9 | 2015-03-11 |
172 | 5KPW|1|32 | Transfer RNA | E-site tRNAfMet | Escherichia coli | Bacteria | RF00005 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III) | Electron microscopy | 3.9 | 2016-09-28 |
173 | 4V8F|1|BC | Transfer RNA | TRNA-FMET, MRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin). | X-ray diffraction | 3.3 | 2014-07-09 |
174 | 4V6G|1|CD | Transfer RNA | TRNA FMET (UNMODIFIED BASES) | Escherichia coli | Bacteria | RF00005 | Initiation complex of 70S ribosome with two tRNAs and mRNA. | X-ray diffraction | 3.5 | 2014-07-09 |
175 | 5EL4|1|2L | Transfer RNA | tRNA-fMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position | X-ray diffraction | 3.15 | 2016-01-27 |
176 | 4WRO|1|2L | Transfer RNA | tRNA-fMet, RNA (30-MER) | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site | X-ray diffraction | 3.05 | 2015-06-10 |
177 | 5IQR|1|5 | Transfer RNA | P-site fMet-tRNA(fMet), mRNA | Escherichia coli | Bacteria | RF00005 | Structure of RelA bound to the 70S ribosome | Electron microscopy | 3 | 2016-05-04 |
178 | 5J4D|1|D | Transfer RNA | tRNA | Escherichia coli | Bacteria | RF00005 | E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon | X-ray diffraction | 3.1 | 2016-05-18 |
179 | 5J4D|1|IB | Transfer RNA | tRNA | Escherichia coli | Bacteria | RF00005 | E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon | X-ray diffraction | 3.1 | 2016-05-18 |
180 | 5L3P|1|x | Transfer RNA | P-site tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex | Electron microscopy | 3.7 | 2016-07-20 |
181 | 4V8J|1|AV | Transfer RNA | tRNA-fMet, tRNA-Phe, messenger RNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of the bacterial ribosome ram mutation G347U. | X-ray diffraction | 3.9 | 2014-07-09 |
182 | 4V5K|1|CV | Transfer RNA | E-SITE TRNA PHE OR P-SITE TRNA PHE | Escherichia coli | Bacteria | RF00005 | Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome | X-ray diffraction | 3.2 | 2014-07-09 |
183 | 5EL5|1|2L | Transfer RNA | tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position | X-ray diffraction | 3.15 | 2016-01-27 |
184 | 4WQR|1|2L | Transfer RNA | tRNA-fMet, mRNA | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site. | X-ray diffraction | 3.15 | 2015-06-10 |
185 | 4WT1|1|2L | Transfer RNA | tRNA-fMet, mRNA | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site | X-ray diffraction | 3.05 | 2015-06-10 |
186 | 5EL7|1|2L | Transfer RNA | E. coli tRNAfMet, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin | X-ray diffraction | 3.15 | 2016-01-27 |
187 | 4YPB|1|QW | Transfer RNA | tRNA fMet | Escherichia coli | Bacteria | RF00005 | Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon | X-ray diffraction | 3.4 | 2015-10-21 |
188 | 4W4G|1|QW | Transfer RNA | tRNA fMet | Escherichia coli | Bacteria | RF00005 | Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon | X-ray diffraction | 3.3 | 2015-10-21 |
189 | 4W4G|1|XW | Transfer RNA | tRNA fMet | Escherichia coli | Bacteria | RF00005 | Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon | X-ray diffraction | 3.3 | 2015-10-21 |
190 | 4YPB|1|XW | Transfer RNA | tRNA fMet | Escherichia coli | Bacteria | RF00005 | Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon | X-ray diffraction | 3.4 | 2015-10-21 |
191 | 4WR6|1|2L | Transfer RNA | tRNA-fMet, mRNA | Escherichia coli | Bacteria | RF00005 | Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site. | X-ray diffraction | 3.05 | 2015-06-10 |
192 | 3JCJ|1|v | Transfer RNA | tRNA, messenger RNA | Escherichia coli | Bacteria | RF00005 | Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association | Electron microscopy | 3.7 | 2016-03-09 |
193 | 4V6G|1|AD | Transfer RNA | TRNA FMET (UNMODIFIED BASES) | Escherichia coli | Bacteria | RF00005 | Initiation complex of 70S ribosome with two tRNAs and mRNA. | X-ray diffraction | 3.5 | 2014-07-09 |
194 | 4V7L|1|CX | Transfer RNA | tRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3') | Escherichia coli | Bacteria | RF00005 | The structures of viomycin bound to the 70S ribosome. | X-ray diffraction | 3 | 2014-07-09 |
195 | 4V5F|1|AW | Transfer RNA | E-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54) | Escherichia coli | Bacteria | RF00005 | The structure of the ribosome with elongation factor G trapped in the post-translocational state | X-ray diffraction | 3.6 | 2014-07-09 |
196 | 4V8Q|1|BW | Transfer RNA | E-SITE or P-SITE TRNA FMET | Escherichia coli | Bacteria | RF00005 | Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome | X-ray diffraction | 3.1 | 2014-07-09 |
197 | 4V8O|1|AV | Transfer RNA | PE HYBRID STATE TRNA FMET, MRNA 5'-R(*AP*AP*AP*AP*AP*AP*UP*GP*UP)-3' | Escherichia coli | Bacteria | RF00005 | Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3 | X-ray diffraction | 3.8 | 2014-07-09 |
198 | 4V8C|1|CD | Transfer RNA | TRNA-FMET | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin). | X-ray diffraction | 3.3 | 2014-07-09 |
199 | 4V8B|1|AD | Transfer RNA | TRNA-FMET | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-ray diffraction | 3 | 2014-07-09 |
200 | 4V87|1|CD | Transfer RNA | TRNA-FMET | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding. | X-ray diffraction | 3.1 | 2014-07-09 |
201 | 4V8C|1|DD | Transfer RNA | TRNA-FMET | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin). | X-ray diffraction | 3.3 | 2014-07-09 |
202 | 4V87|1|BD | Transfer RNA | TRNA-FMET | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding. | X-ray diffraction | 3.1 | 2014-07-09 |
203 | 4V8B|1|CD | Transfer RNA | TRNA-FMET | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-ray diffraction | 3 | 2014-07-09 |
204 | 5AFI|1|w | Transfer RNA | P-site fMet-tRNAfMet | Escherichia coli | Bacteria | RF00005 | 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM | Electron microscopy | 2.9 | 2015-03-11 |
205 | 3QSY|1|D | Transfer RNA | tRNA | Escherichia coli | Bacteria | RF00005 | Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in Archaea | X-ray diffraction | 3.2 | 2012-03-21 |
206 | 4V5K|1|AW | Transfer RNA | E-SITE TRNA PHE OR P-SITE TRNA PHE | Escherichia coli | Bacteria | RF00005 | Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome | X-ray diffraction | 3.2 | 2014-07-09 |
207 | 4V5K|1|CW | Transfer RNA | E-SITE TRNA PHE OR P-SITE TRNA PHE | Escherichia coli | Bacteria | RF00005 | Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome | X-ray diffraction | 3.2 | 2014-07-09 |