NR_4.0_35542.37

Members (243)
History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Å	Date
1	4V9R\|1\|AX (rep)	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	2014-07-09
2	4V9S\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-ray diffraction	3.1	2014-07-09
3	5J30\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Thermus thermophilus 70S termination complex containing E. coli RF1	X-ray diffraction	3.2	2016-10-12
4	4TUA\|1\|QV	Transfer RNA	P-site tRNA-fMet, A-site ASL-Thr, messenger RNA	Escherichia coli	Bacteria	RF00005	Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome	X-ray diffraction	3.6	2015-05-13
5	4TUD\|1\|QV	Transfer RNA	P-site tRNA-fMet, A-site ASL-SufJ, messenger RNA	Escherichia coli	Bacteria	RF00005	Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome	X-ray diffraction	3.6	2015-05-13
6	5J3C\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Thermus thermophilus 70S termination complex containing E. coli RF1	X-ray diffraction	3.04	2016-10-12
7	5U9G\|1\|W	Transfer RNA	fMet-tRNA (P- and E-site), truncated mRNA	Escherichia coli	Bacteria	RF00005	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)	Electron microscopy	3.2	2017-03-22
8	4P70\|1\|XV	Transfer RNA	P-site tRNA fMET, mRNA, A site ASL of tRNA-Proline CGG (unmodified)	Escherichia coli	Bacteria	RF00005	Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome	X-ray diffraction	3.68	2014-08-13
9	4V5F\|1\|AV	Transfer RNA	E-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNA	Escherichia coli	Bacteria	RF00005	The structure of the ribosome with elongation factor G trapped in the post-translocational state	X-ray diffraction	3.6	2014-07-09
10	4V9S\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-ray diffraction	3.1	2014-07-09
11	4V9R\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	2014-07-09
12	3JCE\|1\|8	Transfer RNA	tRNA, mRNA	synthetic construct	Synthetic	RF00005	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	Electron microscopy	3.2	2016-01-13
13	4V7M\|1\|AX	Transfer RNA	tRNA-Met, RNA (5'-R(APAPAPAPAPGPGPAPAPAPUPAAPAPAPAPUPGPCPAPGPUPUPCPAPAPUPCPUPA)-3')	Escherichia coli	Bacteria	RF00005	The structures of Capreomycin bound to the 70S ribosome.	X-ray diffraction	3.45	2014-07-09
14	4V63\|1\|AY	Transfer RNA	P and E-site tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Structural basis for translation termination on the 70S ribosome.	X-ray diffraction	3.21	2014-07-09
15	4V67\|1\|AY	Transfer RNA	P AND E-SITE TRNA(FMET), MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
16	4V87\|1\|BC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding.	X-ray diffraction	3.1	2014-07-09
17	4V8F\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
18	4V9I\|1\|CV	Transfer RNA	P-SITE tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-ray diffraction	3.3	2014-07-09
19	4V6A\|1\|CW	Transfer RNA	tRNA-Met, RNA (5'-R(PAPAPAPUP*G)-3')	Escherichia coli	Bacteria	RF00005	Structure of EF-P bound to the 70S ribosome.	X-ray diffraction	3.1	2014-07-09
20	4V63\|1\|CY	Transfer RNA	P and E-site tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Structural basis for translation termination on the 70S ribosome.	X-ray diffraction	3.21	2014-07-09
21	4V67\|1\|CY	Transfer RNA	P AND E-SITE TRNA(FMET), MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
22	4V8C\|1\|DC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
23	4YZV\|1\|QV	Transfer RNA	P-site tRNA-fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon	X-ray diffraction	3.1	2015-10-21
24	4TUB\|1\|QV	Transfer RNA	P-site tRNA f-Met, A-site tRNA Thr, messenger RNA	Escherichia coli	Bacteria	RF00005	Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome	X-ray diffraction	3.6	2015-05-13
25	5UYM\|1\|W	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	Electron microscopy	3.2	2017-06-07
26	4TUB\|1\|XV	Transfer RNA	P-site tRNA f-Met, A-site tRNA Thr, messenger RNA	Escherichia coli	Bacteria	RF00005	Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome	X-ray diffraction	3.6	2015-05-13
27	5J30\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Thermus thermophilus 70S termination complex containing E. coli RF1	X-ray diffraction	3.2	2016-10-12
28	4TUD\|1\|XV	Transfer RNA	P-site tRNA-fMet, A-site ASL-SufJ, messenger RNA	Escherichia coli	Bacteria	RF00005	Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome	X-ray diffraction	3.6	2015-05-13
29	5J3C\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Thermus thermophilus 70S termination complex containing E. coli RF1	X-ray diffraction	3.04	2016-10-12
30	5MDV\|1\|5	Transfer RNA	fMet-NH-tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	Electron microscopy	2.97	2016-12-14
31	5LZD\|1\|v	Transfer RNA	fMet-tRNAfMet	Escherichia coli	Bacteria	RF00005	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)	Electron microscopy	3.4	2016-11-23
32	4V5F\|1\|CV	Transfer RNA	E-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNA	Escherichia coli	Bacteria	RF00005	The structure of the ribosome with elongation factor G trapped in the post-translocational state	X-ray diffraction	3.6	2014-07-09
33	4Z3S\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	2015-06-03
34	5DOY\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	2015-12-30
35	5L4O\|1\|A	Transfer RNA	tRNA (76-MER)	Escherichia coli	Bacteria	RF00005	Structure of an E.coli initiator tRNAfMet A1-U72 variant	X-ray diffraction	2.8	2017-03-01
36	5KPS\|1\|31	Transfer RNA	P site tRNAfmet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)	Electron microscopy	3.9	2016-09-28
37	5KPW\|1\|31	Transfer RNA	P-site tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)	Electron microscopy	3.9	2016-09-28
38	5KPS\|1\|32	Transfer RNA	E-site tRNAfMet	Escherichia coli	Bacteria	RF00005	Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)	Electron microscopy	3.9	2016-09-28
39	4V8B\|1\|AC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
40	4V67\|1\|AZ	Transfer RNA	P AND E-SITE TRNA(FMET)	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
41	4V63\|1\|AZ	Transfer RNA	P and E-site tRNA(fMet)	Escherichia coli	Bacteria	RF00005	Structural basis for translation termination on the 70S ribosome.	X-ray diffraction	3.21	2014-07-09
42	4V8E\|1\|BC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-ray diffraction	3.3	2014-07-09
43	4V8Q\|1\|BV	Transfer RNA	E-SITE or P-SITE TRNA FMET, MRNA	Escherichia coli	Bacteria	RF00005	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	X-ray diffraction	3.1	2014-07-09
44	4V6G\|1\|CC	Transfer RNA	TRNA FMET (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
45	4V8B\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
46	4V8C\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
47	4V8J\|1\|CV	Transfer RNA	tRNA-fMet, tRNA-Phe, messenger RNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the bacterial ribosome ram mutation G347U.	X-ray diffraction	3.9	2014-07-09
48	4V63\|1\|CZ	Transfer RNA	P and E-site tRNA(fMet)	Escherichia coli	Bacteria	RF00005	Structural basis for translation termination on the 70S ribosome.	X-ray diffraction	3.21	2014-07-09
49	4V67\|1\|CZ	Transfer RNA	P AND E-SITE TRNA(FMET)	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
50	4V8E\|1\|DC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-ray diffraction	3.3	2014-07-09
51	5D8B\|1\|ED	Transfer RNA	tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch	X-ray diffraction	3.63	2015-10-14
52	5D8B\|1\|FD	Transfer RNA	tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch	X-ray diffraction	3.63	2015-10-14
53	4TUC\|1\|QV	Transfer RNA	P-site tRNA fMet, A-site ASL-SufJ, messenger RNA	Escherichia coli	Bacteria	RF00005	Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome	X-ray diffraction	3.6	2015-05-13
54	4ZSN\|1\|QV	Transfer RNA	P-site tRNA-fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	70S-wild-type HigB toxin complex bound to a AAA lysine codon	X-ray diffraction	3.6	2016-09-07
55	4P70\|1\|QV	Transfer RNA	P-site tRNA fMET, mRNA, A site ASL of tRNA-Proline CGG (unmodified)	Escherichia coli	Bacteria	RF00005	Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome	X-ray diffraction	3.68	2014-08-13
56	4LT8\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL Pro	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.14	2014-08-06
57	5UYK\|1\|W	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)	Electron microscopy	3.9	2017-06-07
58	5UYP\|1\|W	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)	Electron microscopy	3.9	2017-06-07
59	5U9F\|1\|W	Transfer RNA	fMet-tRNA (P- and E-site), truncated mRNA	Escherichia coli	Bacteria	RF00005	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)	Electron microscopy	3.2	2017-03-22
60	5UYL\|1\|X	Transfer RNA	tRNAfMet	Escherichia coli	Bacteria	RF00005	70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)	Electron microscopy	3.6	2017-06-14
61	5CZP\|1\|XV	Transfer RNA	P-site tRNA fMet, mRNA	Escherichia coli	Bacteria	RF00005	70S termination complex containing E. coli RF2	X-ray diffraction	3.3	2016-10-12
62	4LNT\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2014-08-06
63	4W4G\|1\|XV	Transfer RNA	tRNA fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon	X-ray diffraction	3.3	2015-10-21
64	4P6F\|1\|XV	Transfer RNA	tRNA-fMet, E-Site tRNA-Phe or A-Site tRNA-Phe, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the peptolide 12C bound to bacterial ribosome	X-ray diffraction	3.6	2014-10-01
65	4LT8\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL Pro	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.14	2014-08-06
66	4YZV\|1\|XV	Transfer RNA	P-site tRNA-fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon	X-ray diffraction	3.1	2015-10-21
67	5DFE\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	70S termination complex containing E. coli RF2	X-ray diffraction	3.1	2016-10-12
68	5HCR\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-04-06
69	5HCP\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.89	2016-04-06
70	5HCQ\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-04-06
71	4Y4P\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	2015-03-18
72	4WRO\|1\|2K	Transfer RNA	tRNA-fMet, RNA (30-MER)	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site	X-ray diffraction	3.05	2015-06-10
73	4Y4P\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	2015-03-18
74	4Z8C\|1\|2x	Transfer RNA	Initiator Methionine tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-ray diffraction	2.9	2015-05-20
75	3CW5\|1\|A	Transfer RNA	Initiator tRNA	Escherichia coli	Bacteria	RF00005	E. coli Initiator tRNA	X-ray diffraction	3.1	2008-09-02
76	4W2I\|1\|AX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	2014-10-15
77	4W2G\|1\|AX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	2014-10-15
78	4W2F\|1\|AX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2014-10-15
79	1VY5\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	2014-08-20
80	4W2H\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	2014-10-15
81	4W2I\|1\|CX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	2014-10-15
82	4W2G\|1\|CX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	2014-10-15
83	4W2F\|1\|CX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2014-10-15
84	1VY5\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	2014-08-20
85	5MDY\|1\|5	Transfer RNA	fMet-NH-tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)	Electron microscopy	3.35	2016-12-21
86	5MDW\|1\|5	Transfer RNA	fMet-NH-tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)	Electron microscopy	3.06	2016-12-14
87	5MDZ\|1\|5	Transfer RNA	fMet-NH-tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Structure of the 70S ribosome (empty A site)	Electron microscopy	3.1	2016-12-14
88	5H5U\|1\|5	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Mechanistic insights into the alternative translation termination by ArfA and RF2	Electron microscopy	3.01	2017-01-25
89	4V5C\|1\|AV	Transfer RNA	P-SITE TRNA FMET, MRNA	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-ray diffraction	3.3	2014-07-09
90	5DOY\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	2015-12-30
91	5IBB\|1\|2L	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-ray diffraction	2.96	2016-05-25
92	4Z3S\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	2015-06-03
93	1VY6\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	2014-08-20
94	1VY4\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	2014-08-20
95	1VY7\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2014-08-20
96	1VY6\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	2014-08-20
97	4WPO\|1\|DX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	2015-01-28
98	5KPX\|1\|31	Transfer RNA	P-site tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)	Electron microscopy	3.9	2016-09-28
99	4V8D\|1\|AC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	2014-07-09
100	4V9I\|1\|AV	Transfer RNA	P-SITE tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-ray diffraction	3.3	2014-07-09
101	4V6A\|1\|AW	Transfer RNA	tRNA-Met, RNA (5'-R(PAPAPAPUP*G)-3')	Escherichia coli	Bacteria	RF00005	Structure of EF-P bound to the 70S ribosome.	X-ray diffraction	3.1	2014-07-09
102	4V87\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding.	X-ray diffraction	3.1	2014-07-09
103	4V7M\|1\|CX	Transfer RNA	RNA (77-MER), RNA (5'-R(APAPAPAPAPGPGPAPAPAPUPAAPAPAPAPUPGPCPAPGPUPUPCPAPAPUPCPUPA)-3')	Escherichia coli	Bacteria	RF00005	The structures of Capreomycin bound to the 70S ribosome.	X-ray diffraction	3.45	2014-07-09
104	4LNT\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2014-08-06
105	4YPB\|1\|QV	Transfer RNA	tRNA fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon	X-ray diffraction	3.4	2015-10-21
106	5DFE\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	70S termination complex containing E. coli RF2	X-ray diffraction	3.1	2016-10-12
107	4P6F\|1\|QV	Transfer RNA	tRNA-fMet, E-Site tRNA-Phe or A-Site tRNA-Phe, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the peptolide 12C bound to bacterial ribosome	X-ray diffraction	3.6	2014-10-01
108	5UYL\|1\|W	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)	Electron microscopy	3.6	2017-06-14
109	5UYK\|1\|X	Transfer RNA	tRNAfMet	Escherichia coli	Bacteria	RF00005	70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)	Electron microscopy	3.9	2017-06-07
110	5UYP\|1\|X	Transfer RNA	tRNAfMet	Escherichia coli	Bacteria	RF00005	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)	Electron microscopy	3.9	2017-06-07
111	5UYQ\|1\|X	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)	Electron microscopy	3.8	2017-06-07
112	5UYN\|1\|X	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)	Electron microscopy	4	2017-06-07
113	4TUC\|1\|XV	Transfer RNA	P-site tRNA fMet, A-site ASL-SufJ, messenger RNA	Escherichia coli	Bacteria	RF00005	Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome	X-ray diffraction	3.6	2015-05-13
114	4YPB\|1\|XV	Transfer RNA	tRNA fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon	X-ray diffraction	3.4	2015-10-21
115	4ZSN\|1\|XV	Transfer RNA	P-site tRNA-fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	70S-wild-type HigB toxin complex bound to a AAA lysine codon	X-ray diffraction	3.6	2016-09-07
116	4TUA\|1\|XV	Transfer RNA	P-site tRNA-fMet, A-site ASL-Thr, messenger RNA	Escherichia coli	Bacteria	RF00005	Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome	X-ray diffraction	3.6	2015-05-13
117	5U4I\|1\|y	Transfer RNA	P-site or E-site fMet-tRNA(fMet)	Escherichia coli	Bacteria	RF00005	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	Electron microscopy	3.5	2017-01-11
118	5HAU\|1\|1w	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	3	2016-04-06
119	4Z8C\|1\|1x	Transfer RNA	Initiator Methionine tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-ray diffraction	2.9	2015-05-20
120	5J4B\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2016-04-27
121	4ZER\|1\|1x	Transfer RNA	tRNA met, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	3.1	2015-05-20
122	5HD1\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.7	2016-04-06
123	5IB7\|1\|2K	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-ray diffraction	2.99	2016-05-25
124	5EL4\|1\|2K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position	X-ray diffraction	3.15	2016-01-27
125	4WQR\|1\|2K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.	X-ray diffraction	3.15	2015-06-10
126	4WT1\|1\|2K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site	X-ray diffraction	3.05	2015-06-10
127	4WSD\|1\|2K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	2015-06-10
128	5EL6\|1\|2K	Transfer RNA	E. coli tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycin	X-ray diffraction	3.1	2016-01-27
129	5EL7\|1\|2K	Transfer RNA	E. coli tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin	X-ray diffraction	3.15	2016-01-27
130	5IBB\|1\|2K	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-ray diffraction	2.96	2016-05-25
131	5HAU\|1\|2w	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	3	2016-04-06
132	5J4C\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	2016-04-27
133	4ZER\|1\|2x	Transfer RNA	tRNA met, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	3.1	2015-05-20
134	5HCQ\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-04-06
135	5HD1\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.7	2016-04-06
136	5HCP\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.89	2016-04-06
137	5HCR\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-04-06
138	5J4B\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2016-04-27
139	3CW6\|1\|A	Transfer RNA	Initiator tRNA	Escherichia coli	Bacteria	RF00005	E. coli Initiator tRNA	X-ray diffraction	3.3	2008-09-02
140	4WQY\|1\|BX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	2015-01-28
141	5KPX\|1\|32	Transfer RNA	E-site tRNAfMet	Escherichia coli	Bacteria	RF00005	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)	Electron microscopy	3.9	2016-09-28
142	4V8D\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	2014-07-09
143	4V97\|1\|CV	Transfer RNA	P-SITE tRNA fMet, E-SITE TRNA PHE OR A-SITE tRNA Phe, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the bacterial ribosome ram mutation G299A.	X-ray diffraction	3.52	2014-07-09
144	4L71\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome	X-ray diffraction	3.9	2014-08-06
145	5CZP\|1\|QV	Transfer RNA	P-site tRNA fMet, mRNA	Escherichia coli	Bacteria	RF00005	70S termination complex containing E. coli RF2	X-ray diffraction	3.3	2016-10-12
146	4LEL\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.9	2014-08-06
147	1VVJ\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.44	2014-08-06
148	4W4G\|1\|QV	Transfer RNA	tRNA fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon	X-ray diffraction	3.3	2015-10-21
149	4LFZ\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin	X-ray diffraction	3.92	2014-08-06
150	4LSK\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.48	2014-08-06
151	5UYQ\|1\|W	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)	Electron microscopy	3.8	2017-06-07
152	5UYN\|1\|W	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)	Electron microscopy	4	2017-06-07
153	4LFZ\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin	X-ray diffraction	3.92	2014-08-06
154	4LEL\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.9	2014-08-06
155	4LSK\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.48	2014-08-06
156	4L71\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome	X-ray diffraction	3.9	2014-08-06
157	1VVJ\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.44	2014-08-06
158	4WR6\|1\|2K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.	X-ray diffraction	3.05	2015-06-10
159	4WPO\|1\|BX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	2015-01-28
160	4V6G\|1\|CB	Transfer RNA	TRNA FMET (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
161	5F8K\|1\|1x	Transfer RNA	tRNAiMet, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-02-03
162	5J4C\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	2016-04-27
163	5EL5\|1\|2K	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position	X-ray diffraction	3.15	2016-01-27
164	4WQ1\|1\|2K	Transfer RNA	tRNA-fMET, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.	X-ray diffraction	3.1	2015-06-10
165	5E7K\|1\|2K	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site	X-ray diffraction	3.2	2016-01-27
166	5IB8\|1\|2K	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-site	X-ray diffraction	3.13	2016-05-25
167	4WQ1\|1\|2L	Transfer RNA	tRNA-fMET, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.	X-ray diffraction	3.1	2015-06-10
168	4WSD\|1\|2L	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	2015-06-10
169	5EL6\|1\|2L	Transfer RNA	E. coli tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycin	X-ray diffraction	3.1	2016-01-27
170	5F8K\|1\|2x	Transfer RNA	tRNAiMet, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-02-03
171	4W2H\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	2014-10-15
172	4WQY\|1\|DX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	2015-01-28
173	4V51\|1\|AV	Transfer RNA	P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	2014-07-09
174	4V51\|1\|CV	Transfer RNA	P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	2014-07-09
175	4V5F\|1\|CW	Transfer RNA	E-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)	Escherichia coli	Bacteria	RF00005	The structure of the ribosome with elongation factor G trapped in the post-translocational state	X-ray diffraction	3.6	2014-07-09
176	4WRA\|1\|2L	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.	X-ray diffraction	3.05	2015-06-10
177	4WZO\|1\|2L	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-fMet and mRNA	X-ray diffraction	3.3	2015-06-10
178	5J4D\|1\|IA	Transfer RNA	tRNA	Escherichia coli	Bacteria	RF00005	E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon	X-ray diffraction	3.1	2016-05-18
179	5J4D\|1\|NC	Transfer RNA	tRNA	Escherichia coli	Bacteria	RF00005	E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon	X-ray diffraction	3.1	2016-05-18
180	5LZA\|1\|v	Transfer RNA	fMet-tRNAfMet, SECIS mRNA	Escherichia coli	Bacteria	RF00005	Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)	Electron microscopy	3.6	2016-11-23
181	4V6G\|1\|AC	Transfer RNA	TRNA FMET (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
182	4V5K\|1\|AV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE, MRNA	Escherichia coli	Bacteria	RF00005	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-ray diffraction	3.2	2014-07-09
183	4V97\|1\|AV	Transfer RNA	P-SITE tRNA fMet, E-SITE TRNA PHE OR A-SITE tRNA Phe, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the bacterial ribosome ram mutation G299A.	X-ray diffraction	3.52	2014-07-09
184	4V7P\|1\|AW	Transfer RNA	P-site tRNA-fMet, messenger RNA (5'-R(APAPUPGPUPAP*G)-3')	Escherichia coli	Bacteria	RF00005	Recognition of the amber stop codon by release factor RF1.	X-ray diffraction	3.62	2014-07-09
185	4V7L\|1\|AX	Transfer RNA	tRNA-Met, RNA (5'-R(APAPAPAPAPGPGPAPAPAPUPAAPAPAPAPUPGPCPAPGPUPUPCPAPAPUPCPUPA)-3')	Escherichia coli	Bacteria	RF00005	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
186	5D8B\|1\|BD	Transfer RNA	tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch	X-ray diffraction	3.63	2015-10-14
187	4V7P\|1\|DW	Transfer RNA	P-site tRNA-fMet, messenger RNA (5'-R(APAPUPGPUPAP*G)-3')	Escherichia coli	Bacteria	RF00005	Recognition of the amber stop codon by release factor RF1.	X-ray diffraction	3.62	2014-07-09
188	5D8B\|1\|XC	Transfer RNA	tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch	X-ray diffraction	3.63	2015-10-14
189	5U4I\|1\|x	Transfer RNA	P-site or E-site fMet-tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	Electron microscopy	3.5	2017-01-11
190	1VY4\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	2014-08-20
191	1VY7\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2014-08-20
192	4WZO\|1\|1K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-fMet and mRNA	X-ray diffraction	3.3	2015-06-10
193	4WZO\|1\|2K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-fMet and mRNA	X-ray diffraction	3.3	2015-06-10
194	5IB7\|1\|2L	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-ray diffraction	2.99	2016-05-25
195	5E7K\|1\|2L	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site	X-ray diffraction	3.2	2016-01-27
196	5IB8\|1\|2L	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-site	X-ray diffraction	3.13	2016-05-25
197	2FMT\|1\|C	Transfer RNA	FORMYL-METHIONYL-TRNAFMET2	synthetic construct	Synthetic	RF00005	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-ray diffraction	2.8	1999-07-29
198	2FMT\|1\|D	Transfer RNA	FORMYL-METHIONYL-TRNAFMET2	synthetic construct	Synthetic	RF00005	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-ray diffraction	2.8	1999-07-29
199	5LMU\|1\|Z	Transfer RNA	tRNAi, mRNA	Escherichia coli	Bacteria	RF00005	Structure of bacterial 30S-IF3-mRNA-tRNA translation pre-initiation complex, closed form (state-4)	Electron microscopy	4	2016-10-05
200	4V5C\|1\|CV	Transfer RNA	P-SITE TRNA FMET, MRNA	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-ray diffraction	3.3	2014-07-09
201	4WRA\|1\|2K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.	X-ray diffraction	3.05	2015-06-10
202	3J9Y\|1\|v	Transfer RNA	P-site fMet-tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome	Electron microscopy	3.9	2015-04-15
203	5AFI\|1\|v	Transfer RNA	P-site fMet-tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	2015-03-11
204	5KPW\|1\|32	Transfer RNA	E-site tRNAfMet	Escherichia coli	Bacteria	RF00005	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)	Electron microscopy	3.9	2016-09-28
205	4V8F\|1\|BC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
206	4V6G\|1\|CD	Transfer RNA	TRNA FMET (UNMODIFIED BASES)	Escherichia coli	Bacteria	RF00005	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
207	5U9F\|1\|X	Transfer RNA	fMet-tRNA (P- and E-site)	Escherichia coli	Bacteria	RF00005	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)	Electron microscopy	3.2	2017-03-22
208	5UYM\|1\|X	Transfer RNA	tRNAfMet	Escherichia coli	Bacteria	RF00005	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	Electron microscopy	3.2	2017-06-07
209	5U9G\|1\|X	Transfer RNA	fMet-tRNA (P- and E-site)	Escherichia coli	Bacteria	RF00005	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)	Electron microscopy	3.2	2017-03-22
210	5EL4\|1\|2L	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position	X-ray diffraction	3.15	2016-01-27
211	4WRO\|1\|2L	Transfer RNA	tRNA-fMet, RNA (30-MER)	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site	X-ray diffraction	3.05	2015-06-10
212	5IQR\|1\|5	Transfer RNA	P-site fMet-tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	2016-05-04
213	5J4D\|1\|D	Transfer RNA	tRNA	Escherichia coli	Bacteria	RF00005	E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon	X-ray diffraction	3.1	2016-05-18
214	5J4D\|1\|IB	Transfer RNA	tRNA	Escherichia coli	Bacteria	RF00005	E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon	X-ray diffraction	3.1	2016-05-18
215	5L3P\|1\|x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex	Electron microscopy	3.7	2016-07-20
216	4V8J\|1\|AV	Transfer RNA	tRNA-fMet, tRNA-Phe, messenger RNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the bacterial ribosome ram mutation G347U.	X-ray diffraction	3.9	2014-07-09
217	4V5K\|1\|CV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-ray diffraction	3.2	2014-07-09
218	5EL5\|1\|2L	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position	X-ray diffraction	3.15	2016-01-27
219	4WT1\|1\|2L	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site	X-ray diffraction	3.05	2015-06-10
220	4WQR\|1\|2L	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.	X-ray diffraction	3.15	2015-06-10
221	5EL7\|1\|2L	Transfer RNA	E. coli tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin	X-ray diffraction	3.15	2016-01-27
222	4YPB\|1\|QW	Transfer RNA	tRNA fMet	Escherichia coli	Bacteria	RF00005	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon	X-ray diffraction	3.4	2015-10-21
223	4W4G\|1\|QW	Transfer RNA	tRNA fMet	Escherichia coli	Bacteria	RF00005	Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon	X-ray diffraction	3.3	2015-10-21
224	4W4G\|1\|XW	Transfer RNA	tRNA fMet	Escherichia coli	Bacteria	RF00005	Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon	X-ray diffraction	3.3	2015-10-21
225	4YPB\|1\|XW	Transfer RNA	tRNA fMet	Escherichia coli	Bacteria	RF00005	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon	X-ray diffraction	3.4	2015-10-21
226	4WR6\|1\|2L	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.	X-ray diffraction	3.05	2015-06-10
227	3JCJ\|1\|v	Transfer RNA	tRNA, messenger RNA	Escherichia coli	Bacteria	RF00005	Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association	Electron microscopy	3.7	2016-03-09
228	4V6G\|1\|AD	Transfer RNA	TRNA FMET (UNMODIFIED BASES)	Escherichia coli	Bacteria	RF00005	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
229	4V7L\|1\|CX	Transfer RNA	tRNA-Met, RNA (5'-R(APAPAPAPAPGPGPAPAPAPUPAAPAPAPAPUPGPCPAPGPUPUPCPAPAPUPCPUPA)-3')	Escherichia coli	Bacteria	RF00005	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
230	4V5F\|1\|AW	Transfer RNA	E-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)	Escherichia coli	Bacteria	RF00005	The structure of the ribosome with elongation factor G trapped in the post-translocational state	X-ray diffraction	3.6	2014-07-09
231	4V8Q\|1\|BW	Transfer RNA	E-SITE or P-SITE TRNA FMET	Escherichia coli	Bacteria	RF00005	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	X-ray diffraction	3.1	2014-07-09
232	4V8O\|1\|AV	Transfer RNA	PE HYBRID STATE TRNA FMET, MRNA 5'-R(APAPAPAPAPAPUPGP*UP)-3'	Escherichia coli	Bacteria	RF00005	Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3	X-ray diffraction	3.8	2014-07-09
233	5U4J\|1\|x+ 5U4J\|1\|z	Transfer RNA	P-site tRNA fMet, mRNA	Escherichia coli	Bacteria	RF00005	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	Electron microscopy	3.7	2017-01-11
234	4V8C\|1\|CD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
235	4V8B\|1\|AD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
236	4V87\|1\|CD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding.	X-ray diffraction	3.1	2014-07-09
237	4V8C\|1\|DD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
238	4V87\|1\|BD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding.	X-ray diffraction	3.1	2014-07-09
239	4V8B\|1\|CD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
240	5AFI\|1\|w	Transfer RNA	P-site fMet-tRNAfMet	Escherichia coli	Bacteria	RF00005	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	2015-03-11
241	3QSY\|1\|D	Transfer RNA	tRNA	Escherichia coli	Bacteria	RF00005	Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in Archaea	X-ray diffraction	3.2	2012-03-21
242	4V5K\|1\|AW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-ray diffraction	3.2	2014-07-09
243	4V5K\|1\|CW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-ray diffraction	3.2	2014-07-09

Release history

Release	2.132	2.133	2.134
Date	2017-06-21	2017-06-24	2017-06-28

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_4.0_35542.37	NR_4.0_35542.36	2.132	(241) 4WR6\|1\|2K, 4V5C\|1\|CV, 5EL7\|1\|2K, 5MDZ\|1\|5, 4V8J\|1\|CV, 3CW6\|1\|A, 4YPB\|1\|QW, 4V67\|1\|CZ, 5IB7\|1\|2L, 5UYQ\|1\|W, 4W2H\|1\|AX, 4LT8\|1\|XV, 5CZP\|1\|XV, 4V87\|1\|CC, 5J4D\|1\|IB, 4WQY\|1\|DX, 4V5C\|1\|AV, 5EL6\|1\|2L, 5MDY\|1\|5, 4V8J\|1\|AV, 3CW5\|1\|A, 4YPB\|1\|QV, 4V67\|1\|CY, 5IB7\|1\|2K, 5UYP\|1\|X, 4W2G\|1\|CX, 4LT8\|1\|QV, 5CZP\|1\|QV, 4V87\|1\|BD, 5J4D\|1\|IA, 4WQY\|1\|BX, 4V51\|1\|CV, 5EL6\|1\|2K, 5MDW\|1\|5, 4V8F\|1\|CC, 2FMT\|1\|D, 4Y4P\|1\|2x, 4V67\|1\|AZ, 5HD1\|1\|2x, 5UYP\|1\|W, 4W2G\|1\|AX, 4LSK\|1\|XV, 5AFI\|1\|w, 4V87\|1\|BC, 5J4D\|1\|D, 4WQR\|1\|2L, 4V51\|1\|AV, 5EL5\|1\|2L, 5MDV\|1\|5, 4V8F\|1\|BC, 2FMT\|1\|C, 4Y4P\|1\|1x, 4V67\|1\|AY, 5HD1\|1\|1x, 5UYN\|1\|X, 4W2F\|1\|CX, 4LSK\|1\|QV, 5AFI\|1\|v, 4V7P\|1\|DW, 5J4C\|1\|2x, 4WQR\|1\|2K, 4TUD\|1\|XV, 5EL5\|1\|2K, 5LZD\|1\|v, 4V8E\|1\|DC, 1VY7\|1\|CX, 4WZO\|1\|2L, 4V63\|1\|CZ, 5HCR\|1\|2x, 5UYN\|1\|W, 4W2F\|1\|AX, 4LNT\|1\|XV, 4ZSN\|1\|XV, 4V7P\|1\|AW, 5J4C\|1\|1x, 4WQ1\|1\|2L, 4TUD\|1\|QV, 5EL4\|1\|2L, 5LZA\|1\|v, 4V8E\|1\|BC, 1VY7\|1\|AX, 4WZO\|1\|2K, 4V63\|1\|CY, 5HCR\|1\|1x, 5UYM\|1\|X, 4V9S\|1\|CX, 4LNT\|1\|QV, 4ZSN\|1\|QV, 4V7M\|1\|CX, 5J4B\|1\|2x, 4TUC\|1\|XV, 5EL4\|1\|2K, 5LMU\|1\|Z, 4V8D\|1\|CC, 1VY6\|1\|CX,	(2) 5UYL\|1\|W, 5UYL\|1\|X	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_4.0_35542.37	NR_4.0_35542.38	2.135	(243) 4LEL\|1\|XV, 5KPX\|1\|31, 4W2G\|1\|CX, 4V7L\|1\|AX, 5EL6\|1\|2K, 5CZP\|1\|QV, 4LT8\|1\|XV, 5MDW\|1\|5, 4W4G\|1\|XW, 4V87\|1\|CC, 5HAU\|1\|2w, 5DOY\|1\|1x, 4TUB\|1\|XV, 5U9G\|1\|W, 4WQY\|1\|DX, 5HD1\|1\|2x, 4V8C\|1\|DC, 4V5C\|1\|CV, 5UYN\|1\|W, 4WSD\|1\|2L, 1VY5\|1\|CX, 5J30\|1\|QV, 4V8J\|1\|AV, 4V5K\|1\|CW, 4YPB\|1\|QV, 3CW6\|1\|A, 5J4D\|1\|D, 4V9I\|1\|CV, 4V67\|1\|CZ, 4Z8C\|1\|1x, 4LEL\|1\|QV, 5KPW\|1\|32, 4V6G\|1\|CD, 5EL5\|1\|2L, 4LT8\|1\|QV, 5MDV\|1\|5, 4V87\|1\|BD, 5HAU\|1\|1w, 4TUB\|1\|QV, 5U9F\|1\|X, 5HD1\|1\|1x, 4V5C\|1\|AV, 5UYM\|1\|X, 1VY5\|1\|AX, 5IQR\|1\|5, 4V5K\|1\|CV, 3CW5\|1\|A, 5J4C\|1\|2x, 4V67\|1\|CY, 4W2G\|1\|AX, 5AFI\|1\|w, 4W4G\|1\|XV, 5DFE\|1\|XV, 4WQY\|1\|BX, 4V8C\|1\|CD, 4WSD\|1\|2K, 4V8F\|1\|CC, 4Y4P\|1\|2x, 4V9I\|1\|AV, 4Z3S\|1\|2x, 5KPW\|1\|31, 4V6G\|1\|CC, 5EL5\|1\|2K, 4LSK\|1\|XV, 5LZD\|1\|v, 4V87\|1\|BC, 5H5U\|1\|5, 4TUA\|1\|XV, 5U9F\|1\|W, 4V8C\|1\|CC, 5HCR\|1\|2x, 4V51\|1\|CV, 5UYM\|1\|W, 1VY4\|1\|CX, 5IBB\|1\|2L, 4V5K\|1\|AW, 2FMT\|1\|D, 5J4C\|1\|1x, 4V67\|1\|AZ, 4L71\|1\|XV, 4W2F\|1\|CX, 5AFI\|1\|v, 4W4G\|1\|QW, 5DFE\|1\|QV, 4WQR\|1\|2L, 4WRO\|1\|2L, 4V8F\|1\|BC, 4Y4P\|1\|1x, 4V97\|1\|CV, 4Z3S\|1\|1x, 4V6G\|1\|CB, 5EL4\|1\|2L, 4LSK\|1\|QV, 5LZA\|1\|v, 4V7P\|1\|D	(0)	(2) 5VP2\|1\|1x, 5VP2\|1\|2x

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	4WZO\|1\|1K	Complex of 70S ribosome with tRNA-fMet and mRNA	X-RAY DIFFRACTION	3.3	68
2	4V6G\|1\|CB	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	65
3	5LMU\|1\|Z	Structure of bacterial 30S-IF3-mRNA-tRNA translation pre-initiation complex, closed form (state-4)	ELECTRON MICROSCOPY	4	72
4	5U4J\|1\|x+5U4J\|1\|z	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	ELECTRON MICROSCOPY	3.7	15
5	5U9G\|1\|W	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)	ELECTRON MICROSCOPY	3.2	77
6	4V6G\|1\|AC	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	77
7	5CZP\|1\|XV	70S termination complex containing E. coli RF2	X-RAY DIFFRACTION	3.3	77
8	5DFE\|1\|XV	70S termination complex containing E. coli RF2	X-RAY DIFFRACTION	3.1	77
9	5J30\|1\|XV	Thermus thermophilus 70S termination complex containing E. coli RF1	X-RAY DIFFRACTION	3.2	77
10	5J3C\|1\|XV	Thermus thermophilus 70S termination complex containing E. coli RF1	X-RAY DIFFRACTION	3.04	77
11	5EL6\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycin	X-RAY DIFFRACTION	3.1	72
12	5E7K\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site	X-RAY DIFFRACTION	3.2	72
13	5IB8\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-site	X-RAY DIFFRACTION	3.13	72
14	5IB7\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-RAY DIFFRACTION	2.99	72
15	5EL5\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position	X-RAY DIFFRACTION	3.15	72
16	5EL7\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin	X-RAY DIFFRACTION	3.15	72
17	5IBB\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-RAY DIFFRACTION	2.96	71
18	5EL4\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position	X-RAY DIFFRACTION	3.15	71
19	4WZO\|1\|2L	Complex of 70S ribosome with tRNA-fMet and mRNA	X-RAY DIFFRACTION	3.3	73
20	4WRO\|1\|2L	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site	X-RAY DIFFRACTION	3.05	72
21	4WT1\|1\|2L	Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site	X-RAY DIFFRACTION	3.05	72
22	4WR6\|1\|2L	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.	X-RAY DIFFRACTION	3.05	72
23	4WRA\|1\|2L	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	3.05	73
24	4WQ1\|1\|2L	Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.	X-RAY DIFFRACTION	3.1	72
25	4V8D\|1\|CC	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	77
26	4V8F\|1\|CC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
27	4WQR\|1\|2K	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.	X-RAY DIFFRACTION	3.15	72
28	4WT1\|1\|2K	Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site	X-RAY DIFFRACTION	3.05	72
29	5EL5\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position	X-RAY DIFFRACTION	3.15	72
30	4WR6\|1\|2K	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.	X-RAY DIFFRACTION	3.05	71
31	4WSD\|1\|2K	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	72
32	4WRA\|1\|2K	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	3.05	73
33	4V8D\|1\|AC	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	77
34	4V8F\|1\|BC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
35	4V8E\|1\|BC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3.3	77
36	4V8E\|1\|DC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3.3	77
37	4WSD\|1\|2L	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	72
38	4WQR\|1\|2L	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.	X-RAY DIFFRACTION	3.15	72
39	5EL7\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin	X-RAY DIFFRACTION	3.15	72
40	5EL6\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycin	X-RAY DIFFRACTION	3.1	72
41	5IB8\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-site	X-RAY DIFFRACTION	3.13	72
42	5EL4\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position	X-RAY DIFFRACTION	3.15	72
43	5IB7\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-RAY DIFFRACTION	2.99	72
44	5IBB\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-RAY DIFFRACTION	2.96	72
45	4WQ1\|1\|2K	Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.	X-RAY DIFFRACTION	3.1	72
46	4WRO\|1\|2K	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site	X-RAY DIFFRACTION	3.05	72
47	4WZO\|1\|2K	Complex of 70S ribosome with tRNA-fMet and mRNA	X-RAY DIFFRACTION	3.3	72
48	5E7K\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site	X-RAY DIFFRACTION	3.2	72
49	3J9Y\|1\|v	Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome	ELECTRON MICROSCOPY	3.9	73
50	5AFI\|1\|v	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	73
51	5L3P\|1\|x	Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex	ELECTRON MICROSCOPY	3.7	73
52	5LZD\|1\|v	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)	ELECTRON MICROSCOPY	3.4	73
53	5LZA\|1\|v	Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)	ELECTRON MICROSCOPY	3.6	73
54	5U9F\|1\|W	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)	ELECTRON MICROSCOPY	3.2	77
55	4V8B\|1\|CC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
56	4V87\|1\|CC	Crystal structure analysis of ribosomal decoding.	X-RAY DIFFRACTION	3.1	77
57	4V8C\|1\|DC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
58	4V8C\|1\|CC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
59	4V6G\|1\|CC	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	77
60	4V8B\|1\|AC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
61	4V87\|1\|BC	Crystal structure analysis of ribosomal decoding.	X-RAY DIFFRACTION	3.1	77
62	5HCQ\|1\|2x	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	72
63	4Z8C\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-RAY DIFFRACTION	2.9	72
64	5HCP\|1\|2x	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.89	72
65	5HCR\|1\|2x	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	72
66	5HD1\|1\|2x	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.7	72
67	5HAU\|1\|2w	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	3	72
68	5HAU\|1\|1w	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	3	72
69	5HCP\|1\|1x	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.89	72
70	5HCR\|1\|1x	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	72
71	5HD1\|1\|1x	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.7	72
72	4Z8C\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-RAY DIFFRACTION	2.9	72
73	5HCQ\|1\|1x	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	72
74	5DOY\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	71
75	4Z3S\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	71
76	4W2I\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	72
77	4V9R\|1\|AX	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	76
78	4V9S\|1\|AX	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-RAY DIFFRACTION	3.1	76
79	4W2G\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	72
80	1VY5\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	72
81	1VY4\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	71
82	4WPO\|1\|BX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	71
83	4WQY\|1\|BX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	72
84	1VY7\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	71
85	1VY6\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	71
86	4W2F\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	72
87	5J4B\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	72
88	5J4C\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	72
89	4Y4P\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	72
90	4W2H\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	72
91	4ZER\|1\|1x	Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	3.1	72
92	5F8K\|1\|1x	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	72
93	5J4D\|1\|NC	E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon	X-RAY DIFFRACTION	3.1	73
94	5J4D\|1\|IA	E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon	X-RAY DIFFRACTION	3.1	73
95	5F8K\|1\|2x	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	72
96	4ZER\|1\|2x	Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	3.1	72
97	4V5K\|1\|AV	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	77
98	4V5C\|1\|CV	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-RAY DIFFRACTION	3.3	76
99	4V5K\|1\|CV	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	77
100	4V5F\|1\|AV	The structure of the ribosome with elongation factor G trapped in the post-translocational state	X-RAY DIFFRACTION	3.6	76
101	4V5F\|1\|CV	The structure of the ribosome with elongation factor G trapped in the post-translocational state	X-RAY DIFFRACTION	3.6	76
102	1VY7\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	71
103	4W2I\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	72
104	5DOY\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	71
105	4Z3S\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	71
106	4V9S\|1\|CX	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-RAY DIFFRACTION	3.1	76
107	4V9R\|1\|CX	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	76
108	4W2H\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	72
109	4WQY\|1\|DX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	72
110	4WPO\|1\|DX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	71
111	1VY4\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	71
112	1VY5\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	72
113	1VY6\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	71
114	4W2G\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	72
115	4W2F\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	72
116	4Y4P\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	72
117	5J4C\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	72
118	5J4B\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	72
119	4V7M\|1\|AX	The structures of Capreomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3.45	77
120	4V5C\|1\|AV	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-RAY DIFFRACTION	3.3	76
121	4V7M\|1\|CX	The structures of Capreomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3.45	77
122	4V7L\|1\|AX	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	77
123	4V9I\|1\|AV	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-RAY DIFFRACTION	3.3	77
124	4V51\|1\|CV	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	76
125	4V51\|1\|AV	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	76
126	4V9I\|1\|CV	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-RAY DIFFRACTION	3.3	77
127	4V7L\|1\|CX	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	77
128	4P70\|1\|QV	Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome	X-RAY DIFFRACTION	3.68	77
129	4TUC\|1\|QV	Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome	X-RAY DIFFRACTION	3.6	77
130	4TUB\|1\|QV	Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome	X-RAY DIFFRACTION	3.6	77
131	4TUD\|1\|XV	Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome	X-RAY DIFFRACTION	3.6	77
132	4TUB\|1\|XV	Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome	X-RAY DIFFRACTION	3.6	77
133	4TUC\|1\|XV	Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome	X-RAY DIFFRACTION	3.6	77
134	4P6F\|1\|XV	Crystal structure of the peptolide 12C bound to bacterial ribosome	X-RAY DIFFRACTION	3.6	77
135	4LNT\|1\|XV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	77
136	4LT8\|1\|XV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.14	77
137	4LFZ\|1\|QV	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin	X-RAY DIFFRACTION	3.92	77
138	1VVJ\|1\|XV	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.44	77
139	4LSK\|1\|QV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.48	77
140	4LFZ\|1\|XV	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin	X-RAY DIFFRACTION	3.92	77
141	4LEL\|1\|XV	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.9	77
142	4L71\|1\|XV	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome	X-RAY DIFFRACTION	3.9	77
143	4LSK\|1\|XV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.48	77
144	4LEL\|1\|QV	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.9	77
145	4L71\|1\|QV	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome	X-RAY DIFFRACTION	3.9	77
146	1VVJ\|1\|QV	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.44	77
147	4LT8\|1\|QV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.14	77
148	4LNT\|1\|QV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	77
149	4P6F\|1\|QV	Crystal structure of the peptolide 12C bound to bacterial ribosome	X-RAY DIFFRACTION	3.6	77
150	4TUD\|1\|QV	Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome	X-RAY DIFFRACTION	3.6	77
151	4TUA\|1\|XV	Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome	X-RAY DIFFRACTION	3.6	77
152	5CZP\|1\|QV	70S termination complex containing E. coli RF2	X-RAY DIFFRACTION	3.3	77
153	5DFE\|1\|QV	70S termination complex containing E. coli RF2	X-RAY DIFFRACTION	3.1	77
154	5J3C\|1\|QV	Thermus thermophilus 70S termination complex containing E. coli RF1	X-RAY DIFFRACTION	3.04	77
155	5J30\|1\|QV	Thermus thermophilus 70S termination complex containing E. coli RF1	X-RAY DIFFRACTION	3.2	77
156	5D8B\|1\|ED	Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch	X-RAY DIFFRACTION	3.63	77
157	5D8B\|1\|FD	Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch	X-RAY DIFFRACTION	3.63	77
158	4YPB\|1\|QV	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon	X-RAY DIFFRACTION	3.4	77
159	4W4G\|1\|QV	Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon	X-RAY DIFFRACTION	3.3	77
160	4YZV\|1\|QV	Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon	X-RAY DIFFRACTION	3.1	77
161	4ZSN\|1\|QV	70S-wild-type HigB toxin complex bound to a AAA lysine codon	X-RAY DIFFRACTION	3.6	77
162	4YZV\|1\|XV	Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon	X-RAY DIFFRACTION	3.1	77
163	4ZSN\|1\|XV	70S-wild-type HigB toxin complex bound to a AAA lysine codon	X-RAY DIFFRACTION	3.6	77
164	4W4G\|1\|XV	Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon	X-RAY DIFFRACTION	3.3	77
165	4YPB\|1\|XV	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon	X-RAY DIFFRACTION	3.4	77
166	4V67\|1\|AY	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
167	4V67\|1\|CY	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
168	4V8Q\|1\|BV	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	X-RAY DIFFRACTION	3.1	77
169	4V63\|1\|CY	Structural basis for translation termination on the 70S ribosome.	X-RAY DIFFRACTION	3.21	77
170	4V63\|1\|AY	Structural basis for translation termination on the 70S ribosome.	X-RAY DIFFRACTION	3.21	77
171	4V7P\|1\|AW	Recognition of the amber stop codon by release factor RF1.	X-RAY DIFFRACTION	3.62	77
172	4V7P\|1\|DW	Recognition of the amber stop codon by release factor RF1.	X-RAY DIFFRACTION	3.62	77
173	4V6A\|1\|CW	Structure of EF-P bound to the 70S ribosome.	X-RAY DIFFRACTION	3.1	77
174	4V6A\|1\|AW	Structure of EF-P bound to the 70S ribosome.	X-RAY DIFFRACTION	3.1	77
175	4P70\|1\|XV	Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome	X-RAY DIFFRACTION	3.68	77
176	4TUA\|1\|QV	Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome	X-RAY DIFFRACTION	3.6	77
177	4V8J\|1\|CV	Crystal structure of the bacterial ribosome ram mutation G347U.	X-RAY DIFFRACTION	3.9	77
178	4V97\|1\|CV	Crystal structure of the bacterial ribosome ram mutation G299A.	X-RAY DIFFRACTION	3.52	77
179	4V97\|1\|AV	Crystal structure of the bacterial ribosome ram mutation G299A.	X-RAY DIFFRACTION	3.52	77
180	4V8J\|1\|AV	Crystal structure of the bacterial ribosome ram mutation G347U.	X-RAY DIFFRACTION	3.9	77
181	5UYQ\|1\|W	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)	ELECTRON MICROSCOPY	3.8	77
182	5UYM\|1\|W	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	ELECTRON MICROSCOPY	3.2	77
183	5UYL\|1\|W	70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)	ELECTRON MICROSCOPY	3.6	77
184	5UYP\|1\|W	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)	ELECTRON MICROSCOPY	3.9	77
185	5UYN\|1\|W	70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)	ELECTRON MICROSCOPY	4	77
186	5UYK\|1\|W	70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)	ELECTRON MICROSCOPY	3.9	77
187	3JCE\|1\|8	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	ELECTRON MICROSCOPY	3.2	77
188	5H5U\|1\|5	Mechanistic insights into the alternative translation termination by ArfA and RF2	ELECTRON MICROSCOPY	3.01	76
189	5KPX\|1\|31	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)	ELECTRON MICROSCOPY	3.9	77
190	5KPW\|1\|31	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)	ELECTRON MICROSCOPY	3.9	77
191	5KPS\|1\|31	Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)	ELECTRON MICROSCOPY	3.9	77
192	5U4I\|1\|x	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	ELECTRON MICROSCOPY	3.5	77
193	5IQR\|1\|5	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	72
194	5MDY\|1\|5	Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)	ELECTRON MICROSCOPY	3.35	70
195	5MDW\|1\|5	Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)	ELECTRON MICROSCOPY	3.06	70
196	5MDV\|1\|5	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	ELECTRON MICROSCOPY	2.97	70
197	5MDZ\|1\|5	Structure of the 70S ribosome (empty A site)	ELECTRON MICROSCOPY	3.1	70
198	5U9G\|1\|X	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)	ELECTRON MICROSCOPY	3.2	77
199	5U9F\|1\|X	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)	ELECTRON MICROSCOPY	3.2	77
200	5AFI\|1\|w	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	73
201	5UYQ\|1\|X	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)	ELECTRON MICROSCOPY	3.8	77
202	5UYP\|1\|X	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)	ELECTRON MICROSCOPY	3.9	77
203	5UYN\|1\|X	70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)	ELECTRON MICROSCOPY	4	77
204	5UYK\|1\|X	70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)	ELECTRON MICROSCOPY	3.9	77
205	5UYL\|1\|X	70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)	ELECTRON MICROSCOPY	3.6	77
206	5UYM\|1\|X	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	ELECTRON MICROSCOPY	3.2	77
207	5KPX\|1\|32	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)	ELECTRON MICROSCOPY	3.9	77
208	5KPS\|1\|32	Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)	ELECTRON MICROSCOPY	3.9	77
209	5KPW\|1\|32	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)	ELECTRON MICROSCOPY	3.9	77
210	4V5K\|1\|CW	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	77
211	4V5K\|1\|AW	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	77
212	4V6G\|1\|AD	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	77
213	4V87\|1\|CD	Crystal structure analysis of ribosomal decoding.	X-RAY DIFFRACTION	3.1	77
214	4V8B\|1\|CD	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
215	4V8C\|1\|DD	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
216	4V8C\|1\|CD	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
217	4V8B\|1\|AD	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
218	4V87\|1\|BD	Crystal structure analysis of ribosomal decoding.	X-RAY DIFFRACTION	3.1	77
219	4V6G\|1\|CD	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	77
220	4W4G\|1\|XW	Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon	X-RAY DIFFRACTION	3.3	77
221	4YPB\|1\|XW	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon	X-RAY DIFFRACTION	3.4	77
222	4W4G\|1\|QW	Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon	X-RAY DIFFRACTION	3.3	77
223	4YPB\|1\|QW	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon	X-RAY DIFFRACTION	3.4	77
224	5J4D\|1\|D	E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon	X-RAY DIFFRACTION	3.1	73
225	5J4D\|1\|IB	E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon	X-RAY DIFFRACTION	3.1	73
226	4V8Q\|1\|BW	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	X-RAY DIFFRACTION	3.1	77
227	4V63\|1\|CZ	Structural basis for translation termination on the 70S ribosome.	X-RAY DIFFRACTION	3.21	77
228	4V63\|1\|AZ	Structural basis for translation termination on the 70S ribosome.	X-RAY DIFFRACTION	3.21	77
229	5D8B\|1\|XC	Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch	X-RAY DIFFRACTION	3.63	77
230	5D8B\|1\|BD	Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch	X-RAY DIFFRACTION	3.63	77
231	4V67\|1\|CZ	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
232	4V67\|1\|AZ	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
233	5U4I\|1\|y	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	ELECTRON MICROSCOPY	3.5	77
234	4V5F\|1\|AW	The structure of the ribosome with elongation factor G trapped in the post-translocational state	X-RAY DIFFRACTION	3.6	76
235	4V5F\|1\|CW	The structure of the ribosome with elongation factor G trapped in the post-translocational state	X-RAY DIFFRACTION	3.6	76
236	4V8O\|1\|AV	Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3	X-RAY DIFFRACTION	3.8	77
237	5L4O\|1\|A	Structure of an E.coli initiator tRNAfMet A1-U72 variant	X-RAY DIFFRACTION	2.8	71
238	3CW5\|1\|A	E. coli Initiator tRNA	X-RAY DIFFRACTION	3.1	72
239	3CW6\|1\|A	E. coli Initiator tRNA	X-RAY DIFFRACTION	3.3	72
240	2FMT\|1\|D	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-RAY DIFFRACTION	2.8	72
241	2FMT\|1\|C	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-RAY DIFFRACTION	2.8	72
242	3JCJ\|1\|v	Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association	ELECTRON MICROSCOPY	3.7	73
243	3QSY\|1\|D	Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in Archaea	X-RAY DIFFRACTION	3.2	77

Equivalence class NR_4.0_35542.37 Obsolete

Release history

Parents

Children