#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14YCP|1|B (rep)Transfer RNAtRNATrpEscherichia coliBacteriaRF00005E. coli dihydrouridine synthase C (DusC) in complex with tRNATrpX-ray diffraction2.552015-04-22
24V5S|1|AYTransfer RNAA-SITE TRNA G24A TRP-TRNA TRP, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
34V5R|1|CYTransfer RNAA-SITE TRNA TRP-TRNA TRP, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
44V5S|1|CYTransfer RNAA-SITE TRNA G24A TRP-TRNA TRP, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
54V5R|1|AYTransfer RNAA-SITE TRNA TRP-TRNA TRP, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
64V5L|1|AYTransfer RNAA-SITE TRNA G24A TRP-TRNA TRP, MRNAEscherichia coliBacteriaRF00005The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-ray diffraction3.12014-07-09
74V5Q|1|AYTransfer RNAA-SITE TRNA G24A TRP-TRNA TRP, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
84V5Q|1|CYTransfer RNAA-SITE TRNA G24A TRP-TRNA TRP, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
94V5P|1|AYTransfer RNAA-SITE TRNA A9C TRP-TRNA TRP, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
104V5P|1|CYTransfer RNAA-SITE TRNA A9C TRP-TRNA TRP, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
118PKL|1|WTransfer RNAtRNA-Trp (P-site), mRNAEscherichia coliBacteriaRF00005Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)Electron microscopy3.092024-03-06
128R3V|1|WTransfer RNAtRNA-Trp (P-site), messenger RNAEscherichia coliBacteriaRF00005Escherichia coli paused disome complex (non-rotated disome interface)Electron microscopy3.282024-03-06
138RCL|1|WTransfer RNAtRNA-Trp (P-site), messenger RNAEscherichia coliBacteriaRF00005Escherichia coli paused disome complex (Non-rotated disome interface class 1)Electron microscopy3.492024-03-13
148RCM|1|WTransfer RNAtRNA-Trp (P-site), messenger RNAEscherichia coliBacteriaRF00005Escherichia coli paused disome complex (Non-rotated disome interface class 2)Electron microscopy3.592024-03-06

Release history

Release3.3263.3273.3283.3293.3303.3313.3323.3333.3343.3353.3363.3373.3383.3393.3403.3413.3423.343
Date2024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-152024-05-222024-05-292024-06-052024-06-122024-06-192024-06-262024-07-032024-07-10

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14V5L|1|AYThe structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-RAY DIFFRACTION3.167
24V5S|1|AYThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.167
34V5S|1|CYThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.167
44V5Q|1|CYThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.167
54V5Q|1|AYThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.167
64V5P|1|CYThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.167
74V5P|1|AYThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.167
84V5R|1|AYThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.167
94V5R|1|CYThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.167
104YCP|1|BE. coli dihydrouridine synthase C (DusC) in complex with tRNATrpX-RAY DIFFRACTION2.5562
118RCM|1|WEscherichia coli paused disome complex (Non-rotated disome interface class 2)ELECTRON MICROSCOPY3.5967
128RCL|1|WEscherichia coli paused disome complex (Non-rotated disome interface class 1)ELECTRON MICROSCOPY3.4967
138R3V|1|WEscherichia coli paused disome complex (non-rotated disome interface)ELECTRON MICROSCOPY3.2867
148PKL|1|WEscherichia coli paused disome complex (leading 70S non-rotated closed PRE state)ELECTRON MICROSCOPY3.0967
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