Equivalence class NR_4.0_54899.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6KQF|1|I (rep) | RNA (5'-R(*CP*UP*CP*GP*A)-3') | synthetic construct | Thermus thermophilus initial transcription complex comprising sigma A and 5'-OH RNA of 5 nt | X-ray diffraction | 2.45 | 2020-03-11 | |||
| 2 | 6KON|1|I | RNA (5'-R(*CP*UP*CP*GP*A)-3') | synthetic construct | Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 5 nt | X-ray diffraction | 3 | 2020-03-11 | |||
| 3 | 6DVB|1|I | RNA (5'-R(*CP*UP*CP*GP*A)-3') | Mycobacterium tuberculosis | Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L) containing 5nt RNA with 5nt spacer | X-ray diffraction | 3.8 | 2019-02-20 | |||
| 4 | 6DVC|1|I | RNA (5'-R(*CP*UP*CP*GP*A)-3') | Mycobacterium tuberculosis | Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L) containing 5nt RNA with 6nt spacer | X-ray diffraction | 3.3 | 2019-02-20 | |||
| 5 | 6DV9|1|I | RNA (5'-R(*CP*UP*CP*GP*A)-3') | Mycobacterium tuberculosis | Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L) containing 5nt RNA with 4nt spacer | X-ray diffraction | 3.8 | 2019-02-20 | |||
| 6 | 6TYE|1|I | RNA (5'-R(P*CP*UP*CP*GP*A)-3') | Mycobacterium tuberculosis | Crystal structure of MTB sigma L transcription initiation complex with 5 nt long RNA primer | X-ray diffraction | 3.79 | 2020-03-11 | |||
| 7 | 6KJ6|1|I | RNA (5'-R(*CP*UP*CP*GP*A)-3') | synthetic construct | cryo-EM structure of Escherichia coli Crl transcription activation complex | Electron microscopy | 3.8 | 2020-01-01 |
Release history
| Release | 3.117 | 3.118 | 3.119 | 3.120 | 3.121 | 3.122 | 3.123 | 3.124 | 3.125 | 3.126 | 3.127 | 3.128 | 3.129 | 3.130 | 3.131 | 3.132 | 3.133 | 3.134 | 3.135 | 3.136 | 3.137 | 3.138 | 3.139 | 3.140 | 3.141 | 3.142 | 3.143 | 3.144 | 3.145 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-03-11 | 2020-03-18 | 2020-03-25 | 2020-04-01 | 2020-04-08 | 2020-04-15 | 2020-04-22 | 2020-04-29 | 2020-05-06 | 2020-05-13 | 2020-05-20 | 2020-05-27 | 2020-06-03 | 2020-06-10 | 2020-06-17 | 2020-06-24 | 2020-07-01 | 2020-07-08 | 2020-07-15 | 2020-07-22 | 2020-07-29 | 2020-08-05 | 2020-08-12 | 2020-08-19 | 2020-08-26 | 2020-09-02 | 2020-09-09 | 2020-09-16 | 2020-09-23 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6TYE|1|I | Crystal structure of MTB sigma L transcription initiation complex with 5 nt long RNA primer | X-RAY DIFFRACTION | 3.79 | 5 |
| 2 | 6KON|1|I | Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 5 nt | X-RAY DIFFRACTION | 3 | 5 |
| 3 | 6DVC|1|I | Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L) containing 5nt RNA with 6nt spacer | X-RAY DIFFRACTION | 3.3 | 5 |
| 4 | 6DV9|1|I | Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L) containing 5nt RNA with 4nt spacer | X-RAY DIFFRACTION | 3.8 | 5 |
| 5 | 6DVB|1|I | Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L) containing 5nt RNA with 5nt spacer | X-RAY DIFFRACTION | 3.8 | 5 |
| 6 | 6KQF|1|I | Thermus thermophilus initial transcription complex comprising sigma A and 5'-OH RNA of 5 nt | X-RAY DIFFRACTION | 2.45 | 5 |
| 7 | 6KJ6|1|I | cryo-EM structure of Escherichia coli Crl transcription activation complex | ELECTRON MICROSCOPY | 3.8 | 5 |