Equivalence class NR_4.0_57460.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Domain | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4P95|1|A (rep) | RNA (192-MER) | Didymium iridis | Eukarya | Speciation of a group I intron into a lariat capping ribozyme (Circularly permutated ribozyme) | X-RAY DIFFRACTION | 2.5 | 2014-05-28 | ||
| 2 | 4P9R|1|A | RNA (189-MER) | Didymium iridis | Eukarya | Speciation of a group I intron into a lariat capping ribozyme (Heavy atom derivative) | X-RAY DIFFRACTION | 2.7 | 2014-05-28 | ||
| 3 | 6GYV|1|A | Lariat-capping ribozyme | Didymium iridis | Eukarya | Lariat-capping ribozyme (circular permutation form) | X-RAY DIFFRACTION, SOLUTION SCATTERING | 2.5 | 2018-08-22 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_57460.2 | NR_4.0_57460.1 | 3.36 | (2) 4P9R|1|A, 4P95|1|A | (1) 6GYV|1|A | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_57460.2 | NR_4.0_57460.3 | 3.51 | (3) 6GYV|1|A, 4P9R|1|A, 4P95|1|A | (0) | (1) 6G7Z|1|A+6G7Z|1|B |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 4P9R|1|A | Speciation of a group I intron into a lariat capping ribozyme (Heavy atom derivative) | X-RAY DIFFRACTION | 2.7 | 191 |
| 2 | 4P95|1|A | Speciation of a group I intron into a lariat capping ribozyme (Circularly permutated ribozyme) | X-RAY DIFFRACTION | 2.5 | 191 |
| 3 | 6GYV|1|A | Lariat-capping ribozyme (circular permutation form) | X-RAY DIFFRACTION, SOLUTION SCATTERING | 2.5 | 192 |