#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14XNR|1|X (rep)Purine riboswitchVibrio Vulnificus Adenine RiboswitchVibrio vulnificusBacteriaRF00167Vibrio Vulnificus Adenine Riboswitch Aptamer Domain, Synthesized by Position-selective Labeling of RNA (PLOR), in Complex with AdenineX-ray diffraction2.212015-05-06
24TZY|1|XPurine riboswitchVibrio vulnificus Adenine RiboswitchVibrio vulnificusBacteriaRF00167Vibrio vulnificus Adenine Riboswitch Variant, grown in both Sr2+ and Mg2+X-ray diffraction2.572014-09-10
34TZX|1|XPurine riboswitchVibrio vulnificus Adenine RiboswitchVibrio vulnificusBacteriaRF00167Vibrio Vulnificus Adenine Riboswitch variant, grown in Mg2+X-ray diffraction2.012014-09-10
45SWE|1|XPurine riboswitchVibrio vulnificus strain 93U204 chromosome II, adenine riboswitch aptamer domainVibrio vulnificusBacteriaRF00167Ligand-bound structure of adenine riboswitch aptamer domain converted in crystal from its ligand-free state using ligand mixing serial femtosecond crystallographyX-ray diffraction32016-11-23

Release history

Release2.1032.1042.1052.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.1583.03.13.23.33.43.53.63.73.83.93.10
Date2016-11-252016-12-022016-12-092016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-082017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-23

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_59689.3NR_4.0_59689.22.103(3) 4XNR|1|X, 4TZY|1|X, 4TZX|1|X(1) 5SWE|1|X(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_59689.3NR_4.0_59689.43.11(4) 4XNR|1|X, 4TZY|1|X, 4TZX|1|X, 5SWE|1|X(0) (1) 5UZA|1|X

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14XNR|1|XVibrio Vulnificus Adenine Riboswitch Aptamer Domain, Synthesized by Position-selective Labeling of RNA (PLOR), in Complex with AdenineX-RAY DIFFRACTION2.2171
24TZY|1|XVibrio vulnificus Adenine Riboswitch Variant, grown in both Sr2+ and Mg2+X-RAY DIFFRACTION2.5771
34TZX|1|XVibrio Vulnificus Adenine Riboswitch variant, grown in Mg2+X-RAY DIFFRACTION2.0171
45SWE|1|XLigand-bound structure of adenine riboswitch aptamer domain converted in crystal from its ligand-free state using ligand mixing serial femtosecond crystallographyX-RAY DIFFRACTION371
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