#IFECompound(s)RNA source organismTitleMethodResolutionDate
15Z1I|1|A (rep)RNA (5'-R(P*GP*CP*GP*UP*CP*GP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')synthetic constructCrystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-fluoro sisomicinX-RAY DIFFRACTION1.92018-05-30
22PWT|1|A+ 2PWT|1|B22-mer of the ribosomal decoding siteCrystal structure of the bacterial ribosomal decoding site complexed with aminoglycoside containing the L-HABA groupX-RAY DIFFRACTION1.82007-09-18
35ZEG|1|A+ 5ZEG|1|B+ 5ZEG|1|CRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding siteX-RAY DIFFRACTION2.42018-03-21
45BWS|1|A+ 5BWS|1|BRNA (5'-D(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)X-RAY DIFFRACTION2.62016-06-22
53TD1|1|B+ 3TD1|1|ARNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*GP*(5BU)P*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408G-mutant and the protozoa cytoplasmic ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.12011-12-07
64K32|1|A+ 4K32|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*UP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of geneticin bound to the leishmanial rRNA A-siteX-RAY DIFFRACTION2.52013-07-31
75BWS|1|C+ 5BWS|1|DRNA (5'-D(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)X-RAY DIFFRACTION2.62016-06-22
85ZEI|1|A+ 5ZEI|1|BRNA (5'-R(P*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3'), RNA (5'-R(P*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.12018-03-21
93BNL|1|A+ 3BNL|1|BA site of bacterial ribosomeCrystal structure of the bacterial ribosomal decoding A site in the presence of [Co(NH3)6]Cl3X-RAY DIFFRACTION2.62008-06-24
105XZ1|1|C+ 5XZ1|1|DRNA (5'-R(*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the Homo Sapiens cytoplasmic ribosomal decoding site in complex with G418X-RAY DIFFRACTION3.012018-07-18
114P3S|1|B+ 4P3S|1|A5'-R(*UP*UP*GP*CP*GP*UP*CP*CP*CP*GP*(5BU)P*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3'Crystal structure of the bacterial A1408C-mutant ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.32016-05-04
125XZ1|1|A+ 5XZ1|1|BRNA (5'-R(*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the Homo Sapiens cytoplasmic ribosomal decoding site in complex with G418X-RAY DIFFRACTION3.012018-07-18
132ET5|1|A+ 2ET5|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex Between Ribostamycin and the 16S-RRNA A-SiteX-RAY DIFFRACTION2.22005-12-13
144PDQ|1|A+ 4PDQ|1|BRNA (5'-*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C-3')Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neomycin analogX-RAY DIFFRACTION32015-01-07
154GPY|1|A+ 4GPY|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with 6'-hydroxysisomicinX-RAY DIFFRACTION2.82013-04-03
164WCP|1|A+ 4WCP|1|B+ 4WCP|1|CRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding siteX-RAY DIFFRACTION2.42015-09-09
175BXK|1|C+ 5BXK|1|DRNA (5'-D(P*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (equatorial 4'-F)X-RAY DIFFRACTION3.12016-06-22
184GPW|1|A+ 4GPW|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P21212 form)X-RAY DIFFRACTION32013-04-03
191MWL|1|A+ 1MWL|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Crystal structure of geneticin bound to the eubacterial 16S rRNA A siteX-RAY DIFFRACTION2.42003-02-18
202ET4|1|A+ 2ET4|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex Between Neomycin B and the 16S-RRNA A-SiteX-RAY DIFFRACTION2.42005-12-13
214GPX|1|A+ 4GPX|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P212121 form)X-RAY DIFFRACTION2.62013-04-03
225BXK|1|A+ 5BXK|1|BRNA (5'-D(P*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (equatorial 4'-F)X-RAY DIFFRACTION3.12016-06-22
232ESJ|1|A+ 2ESJ|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex between Lividomycin A and the 16S-Rrna A SiteX-RAY DIFFRACTION2.22005-12-20
245Z1H|1|B+ 5Z1H|1|ARNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with 6'-fluoro sisomicinX-RAY DIFFRACTION2.42018-05-30
252ESI|1|A+ 2ESI|1|B5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex between Kanamycin A and the 16S-Rrna A Site.X-RAY DIFFRACTION32005-12-20
264WCQ|1|A+ 4WCQ|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.12015-09-09
274F8V|1|A+ 4F8V|1|BRNA (5'-R(P*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with sisomicin (P21212 form)X-RAY DIFFRACTION2.82012-08-15
283WRU|1|A+ 3WRU|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with synthetic aminoglycoside with F-HABA groupX-RAY DIFFRACTION2.32014-11-05
294F8U|1|A+ 4F8U|1|BRNA (5'-R(P*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'), RNA (5'-R(P*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with sisomicin (C2 form)X-RAY DIFFRACTION22012-08-15
303S4P|1|A+ 3S4P|1|BRNA (5'-R(P*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site complexed with an amphiphilic paromomycin O2''-ether analogueX-RAY DIFFRACTION2.562011-09-21
314P20|1|A+ 4P20|1|B5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Crystal structures of the bacterial ribosomal decoding site complexed with amikacinX-RAY DIFFRACTION2.72014-05-07
321LC4|1|A+ 1LC4|1|B5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Crystal Structure of Tobramycin Bound to the Eubacterial 16S rRNA A SiteX-RAY DIFFRACTION2.542003-04-08
332ET3|1|A+ 2ET3|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex Between Gentamicin C1A and the 16S-RRNA A-SiteX-RAY DIFFRACTION2.82005-12-13
345ZEJ|1|A+ 5ZEJ|1|BRNA (5'-R(P*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with paromomycinX-RAY DIFFRACTION3.52018-03-21
355ZEM|1|A+ 5ZEM|1|BRNA (5'-R(P*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in the presence of gentamicinX-RAY DIFFRACTION3.12018-03-21
365Z71|1|B+ 5Z71|1|ARNA (5'-R(P*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the Homo Sapiens cytoplasmic ribosomal decoding site in complex with G418 (P21212 form)X-RAY DIFFRACTION2.52019-01-30
374WCR|1|A+ 4WCR|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with paromomycinX-RAY DIFFRACTION3.52015-09-09
384WCS|1|A+ 4WCS|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in the presence of gentamicinX-RAY DIFFRACTION3.12015-09-09
392BE0|1|A+ 2BE0|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex Between Paromomycin Derivative JS5-39 and the 16S-Rrna A-Site.X-RAY DIFFRACTION2.632005-12-20
402BEE|1|A+ 2BEE|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex Between Paromomycin derivative JS4 and the 16S-Rrna A SiteX-RAY DIFFRACTION2.62005-12-20
411J7T|1|A+ 1J7T|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex between Paromomycin and the 16S-rRNA A-site at 2.5 A resolutionX-RAY DIFFRACTION2.52002-05-18
422G5Q|1|A+ 2G5Q|1|B5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Crystal structures of the bacterial ribosomal decoding site complexed with amikacin.X-RAY DIFFRACTION2.72006-10-03
431YRJ|1|A+ 1YRJ|1|BBacterial 16 S Ribosomal RNA A Site OligonucleotideCrystal Structure of Apramycin bound to a Ribosomal RNA A site oligonucleotideX-RAY DIFFRACTION2.72005-06-07
442F4T|1|B+ 2F4T|1|A5'-R(*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3', 5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Asite RNA + designer antibioticX-RAY DIFFRACTION32006-05-02

Release history

Release3.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.983.993.1003.101
Date2019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-092019-10-162019-10-232019-10-302019-11-062019-11-132019-11-20

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_71199.1NR_4.0_03323.13.75(1) 5ZEI|1|A+5ZEI|1|B(43) 4GPW|1|A+4GPW|1|B, 4F8V|1|A+4F8V|1|B, 4F8U|1|A+4F8U|1|B, 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 3S4P|1|A+3S4P|1|B, 3BNL|1|A+3BNL|1|B, 2PWT|1|A+2PWT|1|B, 2G5Q|1|A+2G5Q|1|B, 2F4T|1|B+2F4T|1|A, 2ET5|1|A+2ET5|1|B, 5ZEM|1|A+5ZEM|1|B, 2ET4|1|A+2ET4|1|B, 5ZEJ|1|A+5ZEJ|1|B, 2ET3|1|A+2ET3|1|B, 5ZEG|1|A+5ZEG|1|B+5ZEG|1|C, 2ESJ|1|A+2ESJ|1|B, 5Z71|1|B+5Z71|1|A, 2ESI|1|A+2ESI|1|B, 5Z1I|1|A, 2BEE|1|A+2BEE|1|B, 5Z1H|1|B+5Z1H|1|A, 2BE0|1|A+2BE0|1|B, 5XZ1|1|C+5XZ1|1|D, 1YRJ|1|A+1YRJ|1|B, 5XZ1|1|A+5XZ1|1|B, 1MWL|1|A+1MWL|1|B, 5BXK|1|C+5BXK|1|D, 1LC4|1|A+1LC4|1|B, 5BXK|1|A+5BXK|1|B, 1J7T|1|A+1J7T|1|B, 5BWS|1|C+5BWS|1|D, 5BWS|1|A+5BWS|1|B, 4WCS|1|A+4WCS|1|B, 4WCR|1|A+4WCR|1|B, 4WCQ|1|A+4WCQ|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4PDQ|1|A+4PDQ|1|B, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4GPY|1|A+4GPY|1|B, 4GPX|1|A+4GPX|1|B(0)
NR_4.0_71199.1NR_4.0_46565.13.75(1) 5ZEG|1|A+5ZEG|1|B+5ZEG|1|C(43) 5ZEJ|1|A+5ZEJ|1|B, 2ET4|1|A+2ET4|1|B, 5ZEI|1|A+5ZEI|1|B, 2ET3|1|A+2ET3|1|B, 5Z71|1|B+5Z71|1|A, 2ESJ|1|A+2ESJ|1|B, 5Z1I|1|A, 2ESI|1|A+2ESI|1|B, 5Z1H|1|B+5Z1H|1|A, 2BEE|1|A+2BEE|1|B, 5XZ1|1|C+5XZ1|1|D, 2BE0|1|A+2BE0|1|B, 5XZ1|1|A+5XZ1|1|B, 1YRJ|1|A+1YRJ|1|B, 5BXK|1|C+5BXK|1|D, 1MWL|1|A+1MWL|1|B, 5BXK|1|A+5BXK|1|B, 1LC4|1|A+1LC4|1|B, 5BWS|1|C+5BWS|1|D, 1J7T|1|A+1J7T|1|B, 5BWS|1|A+5BWS|1|B, 4WCS|1|A+4WCS|1|B, 4WCR|1|A+4WCR|1|B, 4WCQ|1|A+4WCQ|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4PDQ|1|A+4PDQ|1|B, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4GPY|1|A+4GPY|1|B, 4GPX|1|A+4GPX|1|B, 4GPW|1|A+4GPW|1|B, 4F8V|1|A+4F8V|1|B, 4F8U|1|A+4F8U|1|B, 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 3S4P|1|A+3S4P|1|B, 3BNL|1|A+3BNL|1|B, 2PWT|1|A+2PWT|1|B, 2G5Q|1|A+2G5Q|1|B, 2F4T|1|B+2F4T|1|A, 5ZEM|1|A+5ZEM|1|B, 2ET5|1|A+2ET5|1|B(0)
NR_4.0_71199.1NR_4.0_50848.13.75(1) 5ZEJ|1|A+5ZEJ|1|B(43) 4WCS|1|A+4WCS|1|B, 4WCR|1|A+4WCR|1|B, 4WCQ|1|A+4WCQ|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4PDQ|1|A+4PDQ|1|B, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4GPY|1|A+4GPY|1|B, 4GPX|1|A+4GPX|1|B, 4GPW|1|A+4GPW|1|B, 4F8V|1|A+4F8V|1|B, 4F8U|1|A+4F8U|1|B, 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 3S4P|1|A+3S4P|1|B, 3BNL|1|A+3BNL|1|B, 2PWT|1|A+2PWT|1|B, 2G5Q|1|A+2G5Q|1|B, 2F4T|1|B+2F4T|1|A, 2ET5|1|A+2ET5|1|B, 5ZEM|1|A+5ZEM|1|B, 2ET4|1|A+2ET4|1|B, 5ZEI|1|A+5ZEI|1|B, 2ET3|1|A+2ET3|1|B, 5ZEG|1|A+5ZEG|1|B+5ZEG|1|C, 2ESJ|1|A+2ESJ|1|B, 5Z71|1|B+5Z71|1|A, 2ESI|1|A+2ESI|1|B, 5Z1I|1|A, 2BEE|1|A+2BEE|1|B, 5Z1H|1|B+5Z1H|1|A, 2BE0|1|A+2BE0|1|B, 5XZ1|1|C+5XZ1|1|D, 1YRJ|1|A+1YRJ|1|B, 5XZ1|1|A+5XZ1|1|B, 1MWL|1|A+1MWL|1|B, 5BXK|1|C+5BXK|1|D, 1LC4|1|A+1LC4|1|B, 5BXK|1|A+5BXK|1|B, 1J7T|1|A+1J7T|1|B, 5BWS|1|C+5BWS|1|D, 5BWS|1|A+5BWS|1|B(0)
NR_4.0_71199.1NR_4.0_97151.33.75(41) 5BXK|1|A+5BXK|1|B, 4GPY|1|A+4GPY|1|B, 2ESI|1|A+2ESI|1|B, 5BWS|1|C+5BWS|1|D, 4GPX|1|A+4GPX|1|B, 2BEE|1|A+2BEE|1|B, 5BWS|1|A+5BWS|1|B, 4GPW|1|A+4GPW|1|B, 2BE0|1|A+2BE0|1|B, 4WCS|1|A+4WCS|1|B, 4F8V|1|A+4F8V|1|B, 1YRJ|1|A+1YRJ|1|B, 5ZEM|1|A+5ZEM|1|B, 4WCR|1|A+4WCR|1|B, 4F8U|1|A+4F8U|1|B, 1MWL|1|A+1MWL|1|B, 5Z71|1|B+5Z71|1|A, 2G5Q|1|A+2G5Q|1|B, 4WCQ|1|A+4WCQ|1|B, 3WRU|1|A+3WRU|1|B, 1LC4|1|A+1LC4|1|B, 5Z1I|1|A, 2F4T|1|B+2F4T|1|A, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 3TD1|1|B+3TD1|1|A, 1J7T|1|A+1J7T|1|B, 5Z1H|1|B+5Z1H|1|A, 4PDQ|1|A+4PDQ|1|B, 2ET5|1|A+2ET5|1|B, 3S4P|1|A+3S4P|1|B, 5XZ1|1|C+5XZ1|1|D, 4P3S|1|B+4P3S|1|A, 2ET4|1|A+2ET4|1|B, 3BNL|1|A+3BNL|1|B, 5XZ1|1|A+5XZ1|1|B, 4P20|1|A+4P20|1|B, 2ET3|1|A+2ET3|1|B, 2PWT|1|A+2PWT|1|B, 5BXK|1|C+5BXK|1|D, 4K32|1|A+4K32|1|B, 2ESJ|1|A+2ESJ|1|B(3) 5ZEG|1|A+5ZEG|1|B+5ZEG|1|C, 5ZEI|1|A+5ZEI|1|B, 5ZEJ|1|A+5ZEJ|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14WCP|1|A+4WCP|1|B+4WCP|1|CCrystal structure of the bacterial A1408me1A-mutant ribosomal decoding siteX-RAY DIFFRACTION2.422
25ZEG|1|A+5ZEG|1|B+5ZEG|1|CCrystal structure of the bacterial A1408me1A-mutant ribosomal decoding siteX-RAY DIFFRACTION2.422
35BWS|1|C+5BWS|1|DCrystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)X-RAY DIFFRACTION2.623
45BXK|1|C+5BXK|1|DCrystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (equatorial 4'-F)X-RAY DIFFRACTION3.123
53BNL|1|A+3BNL|1|BCrystal structure of the bacterial ribosomal decoding A site in the presence of [Co(NH3)6]Cl3X-RAY DIFFRACTION2.622
64PDQ|1|A+4PDQ|1|BCrystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neomycin analogX-RAY DIFFRACTION323
75BXK|1|A+5BXK|1|BCrystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (equatorial 4'-F)X-RAY DIFFRACTION3.122
85BWS|1|A+5BWS|1|BCrystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)X-RAY DIFFRACTION2.623
91YRJ|1|A+1YRJ|1|BCrystal Structure of Apramycin bound to a Ribosomal RNA A site oligonucleotideX-RAY DIFFRACTION2.723
102PWT|1|A+2PWT|1|BCrystal structure of the bacterial ribosomal decoding site complexed with aminoglycoside containing the L-HABA groupX-RAY DIFFRACTION1.821
112BE0|1|A+2BE0|1|BComplex Between Paromomycin Derivative JS5-39 and the 16S-Rrna A-Site.X-RAY DIFFRACTION2.6321
122BEE|1|A+2BEE|1|BComplex Between Paromomycin derivative JS4 and the 16S-Rrna A SiteX-RAY DIFFRACTION2.621
133S4P|1|A+3S4P|1|BCrystal structure of the bacterial ribosomal decoding site complexed with an amphiphilic paromomycin O2''-ether analogueX-RAY DIFFRACTION2.5621
142F4T|1|B+2F4T|1|AAsite RNA + designer antibioticX-RAY DIFFRACTION323
155Z1H|1|B+5Z1H|1|ACrystal structure of the bacterial ribosomal decoding site in complex with 6'-fluoro sisomicinX-RAY DIFFRACTION2.423
161MWL|1|A+1MWL|1|BCrystal structure of geneticin bound to the eubacterial 16S rRNA A siteX-RAY DIFFRACTION2.424
174F8U|1|A+4F8U|1|BCrystal structure of the bacterial ribosomal decoding site in complex with sisomicin (C2 form)X-RAY DIFFRACTION222
184F8V|1|A+4F8V|1|BCrystal structure of the bacterial ribosomal decoding site in complex with sisomicin (P21212 form)X-RAY DIFFRACTION2.821
192ET3|1|A+2ET3|1|BComplex Between Gentamicin C1A and the 16S-RRNA A-SiteX-RAY DIFFRACTION2.821
201J7T|1|A+1J7T|1|BComplex between Paromomycin and the 16S-rRNA A-site at 2.5 A resolutionX-RAY DIFFRACTION2.521
212ET4|1|A+2ET4|1|BComplex Between Neomycin B and the 16S-RRNA A-SiteX-RAY DIFFRACTION2.421
222ET5|1|A+2ET5|1|BComplex Between Ribostamycin and the 16S-RRNA A-SiteX-RAY DIFFRACTION2.221
232ESJ|1|A+2ESJ|1|BComplex between Lividomycin A and the 16S-Rrna A SiteX-RAY DIFFRACTION2.221
244GPY|1|A+4GPY|1|BCrystal structure of the bacterial ribosomal decoding site in complex with 6'-hydroxysisomicinX-RAY DIFFRACTION2.822
251LC4|1|A+1LC4|1|BCrystal Structure of Tobramycin Bound to the Eubacterial 16S rRNA A SiteX-RAY DIFFRACTION2.5421
262G5Q|1|A+2G5Q|1|BCrystal structures of the bacterial ribosomal decoding site complexed with amikacin.X-RAY DIFFRACTION2.721
274P20|1|A+4P20|1|BCrystal structures of the bacterial ribosomal decoding site complexed with amikacinX-RAY DIFFRACTION2.721
282ESI|1|A+2ESI|1|BComplex between Kanamycin A and the 16S-Rrna A Site.X-RAY DIFFRACTION323
293WRU|1|A+3WRU|1|BCrystal structure of the bacterial ribosomal decoding site in complex with synthetic aminoglycoside with F-HABA groupX-RAY DIFFRACTION2.321
303TD1|1|B+3TD1|1|ACrystal structure of the bacterial A1408G-mutant and the protozoa cytoplasmic ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.122
314WCQ|1|A+4WCQ|1|BCrystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.121
324P3S|1|B+4P3S|1|ACrystal structure of the bacterial A1408C-mutant ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.321
335ZEI|1|A+5ZEI|1|BCrystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.121
344WCR|1|A+4WCR|1|BCrystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with paromomycinX-RAY DIFFRACTION3.521
355ZEJ|1|A+5ZEJ|1|BCrystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with paromomycinX-RAY DIFFRACTION3.521
365ZEM|1|A+5ZEM|1|BCrystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in the presence of gentamicinX-RAY DIFFRACTION3.121
374WCS|1|A+4WCS|1|BCrystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in the presence of gentamicinX-RAY DIFFRACTION3.121
384GPW|1|A+4GPW|1|BCrystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P21212 form)X-RAY DIFFRACTION322
394GPX|1|A+4GPX|1|BCrystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P212121 form)X-RAY DIFFRACTION2.621
404K32|1|A+4K32|1|BCrystal structure of geneticin bound to the leishmanial rRNA A-siteX-RAY DIFFRACTION2.521
415XZ1|1|A+5XZ1|1|BCrystal structure of the Homo Sapiens cytoplasmic ribosomal decoding site in complex with G418X-RAY DIFFRACTION3.0122
425Z1I|1|ACrystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-fluoro sisomicinX-RAY DIFFRACTION1.921
435XZ1|1|C+5XZ1|1|DCrystal structure of the Homo Sapiens cytoplasmic ribosomal decoding site in complex with G418X-RAY DIFFRACTION3.0122
445Z71|1|B+5Z71|1|ACrystal structure of the Homo Sapiens cytoplasmic ribosomal decoding site in complex with G418 (P21212 form)X-RAY DIFFRACTION2.522