#IFECompound(s)RNA source organismTitleMethodResolutionDate
14PRF|1|B (rep)Hepatitis Delta virus ribozymeA Second Look at the HDV Ribozyme Structure and Dynamics.X-RAY DIFFRACTION2.392014-10-29
22OJ3|1|BHDV RIBOZYMEHepatitis Delta Virus ribozyme precursor structure, with C75U mutation, bound to Tl+ and cobalt hexammine (Co(NH3)63+)X-RAY DIFFRACTION2.92007-03-27
31SJF|1|BHepatitis Delta virus ribozymeCrystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Cobalt Hexammine solutionX-RAY DIFFRACTION2.752004-05-18
41VC0|1|BHepatitis Delta virus ribozymeCrystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Imidazole and Sr2+ solutionX-RAY DIFFRACTION2.52004-05-18
51VC6|1|BHepatitis Delta virus ribozymeCrystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Product with C75U Mutaion, cleaved in Imidazole and Mg2+ solutionsX-RAY DIFFRACTION2.82004-05-18
61VBZ|1|BHepatitis Delta virus ribozymeCrystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Ba2+ solutionX-RAY DIFFRACTION2.82004-05-18
71SJ4|1|Rprecursor form of the Hepatitis Delta virus ribozymeHepatitis delta virusCrystal structure of a C75U mutant Hepatitis Delta Virus ribozyme precursor, in Cu2+ solutionX-RAY DIFFRACTION2.72004-05-18
81SJ3|1|Rprecursor form of the Hepatitis Delta virus ribozymeHepatitis delta virusHepatitis Delta Virus Gemonic Ribozyme Precursor, with Mg2+ BoundX-RAY DIFFRACTION2.22004-05-18
92OIH|1|BHDV ribozymeHepatitis Delta Virus gemonic ribozyme precursor with C75U mutation and bound to monovalent cation Tl+X-RAY DIFFRACTION2.42007-03-27
101VC5|1|BHepatitis Delta virus ribozymeCrystal Structure of the Wild Type Hepatitis Delta Virus Gemonic Ribozyme Precursor, in EDTA solutionX-RAY DIFFRACTION3.42004-05-18
111VBY|1|BHepatitis Delta virus ribozymeCrystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, and Mn2+ boundX-RAY DIFFRACTION2.92004-05-18
121VBX|1|BHepatitis Delta virus ribozymeCrystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in EDTA solutionX-RAY DIFFRACTION2.72004-05-18
131CX0|1|BHDV RIBOZYME SELF-CLEAVEDHEPATITIS DELTA VIRUS RIBOZYMEX-RAY DIFFRACTION2.31999-09-08
141DRZ|1|BRNA (HEPATITIS DELTA VIRUS GENOMIC RIBOZYME)Hepatitis delta virusU1A SPLICEOSOMAL PROTEIN/HEPATITIS DELTA VIRUS GENOMIC RIBOZYME COMPLEXX-RAY DIFFRACTION2.31999-02-16
151VC7|1|BHepatitis Delta virus ribozymeCrystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Sr2+ solutionX-RAY DIFFRACTION2.452004-05-18

Release history

Release3.03.13.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.90
Date2017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-232018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-04

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_73165.2NR_4.0_73165.13.0(13) 4PRF|1|B, 2OJ3|1|B, 2OIH|1|B, 1VC6|1|B, 1VC5|1|B, 1VC0|1|B, 1VBZ|1|B, 1VBY|1|B, 1VBX|1|B, 1SJF|1|B, 1SJ4|1|R, 1SJ3|1|R, 1DRZ|1|B(2) 1VC7|1|B, 1CX0|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
11CX0|1|BHEPATITIS DELTA VIRUS RIBOZYMEX-RAY DIFFRACTION2.372
24PRF|1|BA Second Look at the HDV Ribozyme Structure and Dynamics.X-RAY DIFFRACTION2.3975
31DRZ|1|BU1A SPLICEOSOMAL PROTEIN/HEPATITIS DELTA VIRUS GENOMIC RIBOZYME COMPLEXX-RAY DIFFRACTION2.372
41VC6|1|BCrystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Product with C75U Mutaion, cleaved in Imidazole and Mg2+ solutionsX-RAY DIFFRACTION2.872
51VBZ|1|BCrystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Ba2+ solutionX-RAY DIFFRACTION2.873
61VC0|1|BCrystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Imidazole and Sr2+ solutionX-RAY DIFFRACTION2.573
71VC7|1|BCrystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Sr2+ solutionX-RAY DIFFRACTION2.4574
81VBY|1|BCrystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, and Mn2+ boundX-RAY DIFFRACTION2.973
91SJ3|1|RHepatitis Delta Virus Gemonic Ribozyme Precursor, with Mg2+ BoundX-RAY DIFFRACTION2.273
101SJ4|1|RCrystal structure of a C75U mutant Hepatitis Delta Virus ribozyme precursor, in Cu2+ solutionX-RAY DIFFRACTION2.773
111VBX|1|BCrystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in EDTA solutionX-RAY DIFFRACTION2.773
122OIH|1|BHepatitis Delta Virus gemonic ribozyme precursor with C75U mutation and bound to monovalent cation Tl+X-RAY DIFFRACTION2.473
132OJ3|1|BHepatitis Delta Virus ribozyme precursor structure, with C75U mutation, bound to Tl+ and cobalt hexammine (Co(NH3)63+)X-RAY DIFFRACTION2.973
141SJF|1|BCrystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Cobalt Hexammine solutionX-RAY DIFFRACTION2.7574
151VC5|1|BCrystal Structure of the Wild Type Hepatitis Delta Virus Gemonic Ribozyme Precursor, in EDTA solutionX-RAY DIFFRACTION3.470