Equivalence class NR_4.0_73426.9 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7EVO|1|H (rep) | U2 splicesomal small nuclear RNA | U2 snRNA | Homo sapiens | Eukarya | RF00004 | The cryo-EM structure of the human 17S U2 snRNP | Electron microscopy | 2.5 | 2022-08-03 |
| 2 | 8HK1|1|H | U2 splicesomal small nuclear RNA | U2 snRNA | Homo sapiens | Eukarya | RF00004 | The cryo-EM structure of human pre-17S U2 snRNP | Electron microscopy | 2.7 | 2023-03-08 |
| 3 | 8H6L|1|2A | U2 splicesomal small nuclear RNA | pre-mRNA, U2 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00004 | Cryo-EM structure of human exon-defined spliceosome in the early B state. | Electron microscopy | 2.6 | 2024-05-01 |
| 4 | 7Q4O|1|2+ 7Q4O|1|h | U2 splicesomal small nuclear RNA | BPS oligo, U2 snRNA | Homo sapiens | Eukarya | RF00004 | Substrate-bound A-like U2 snRNP | Electron microscopy | 2.2 | 2022-03-30 |
| 5 | 8H6K|1|2A | U2 splicesomal small nuclear RNA | pre-mRNA, U2 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00004 | Cryo-EM structure of human exon-defined spliceosome in the mature B state. | Electron microscopy | 2.7 | 2024-05-01 |
| 6 | 7Q4P|1|2 | U2 splicesomal small nuclear RNA | U2 snRNA | Homo sapiens | Eukarya | RF00004 | U2 snRNP after ATP-dependent remodelling snRNP | Electron microscopy | 2.2 | 2022-03-30 |
| 7 | 7Q3L|1|2 | U2 splicesomal small nuclear RNA | U2 snRNA | Homo sapiens | Eukarya | RF00004 | Human 17S U2 snRNP 5' domain | Electron microscopy | 2.3 | 2022-03-30 |
| 8 | 7VPX|1|H | U2 splicesomal small nuclear RNA | pre-mRNA, U2 snRNA | Homo sapiens | Eukarya | RF00004 | The cryo-EM structure of the human pre-A complex | Electron microscopy | 3 | 2023-05-03 |
| 9 | 8H6E|1|2A | U2 splicesomal small nuclear RNA | pre-mRNA, U2 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00004 | Cryo-EM structure of human exon-defined spliceosome in the late pre-B state. | Electron microscopy | 3.2 | 2024-05-01 |
| 10 | 8H6J|1|2A | U2 splicesomal small nuclear RNA | pre-mRNA, U2 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00004 | Cryo-EM structure of human exon-defined spliceosome in the mature pre-B state. | Electron microscopy | 3.25 | 2024-05-01 |
| 11 | 6QX9|1|2 | U2 splicesomal small nuclear RNA | AdML pre-mRNA, U2 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00004 | Structure of a human fully-assembled precatalytic spliceosome (pre-B complex). | Electron microscopy | 3.28 | 2019-04-17 |
| 12 | 7ONB|1|H+ 7ONB|1|G | U2 splicesomal small nuclear RNA | MINX, RNU2 | Homo sapiens | Eukarya | RF00004 | Structure of the U2 5' module of the A3'-SSA complex | Electron microscopy | 3.1 | 2021-08-04 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well.
| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 8H6E|1|2A | Cryo-EM structure of human exon-defined spliceosome in the late pre-B state. | ELECTRON MICROSCOPY | 3.2 | 109 |
| 2 | 8H6J|1|2A | Cryo-EM structure of human exon-defined spliceosome in the mature pre-B state. | ELECTRON MICROSCOPY | 3.25 | 109 |
| 3 | 8H6L|1|2A | Cryo-EM structure of human exon-defined spliceosome in the early B state. | ELECTRON MICROSCOPY | 2.6 | 109 |
| 4 | 8H6K|1|2A | Cryo-EM structure of human exon-defined spliceosome in the mature B state. | ELECTRON MICROSCOPY | 2.7 | 109 |
| 5 | 7ONB|1|H+7ONB|1|G | Structure of the U2 5' module of the A3'-SSA complex | ELECTRON MICROSCOPY | 3.1 | 32 |
| 6 | 7VPX|1|H | The cryo-EM structure of the human pre-A complex | ELECTRON MICROSCOPY | 3 | 130 |
| 7 | 7EVO|1|H | The cryo-EM structure of the human 17S U2 snRNP | ELECTRON MICROSCOPY | 2.5 | 148 |
| 8 | 8HK1|1|H | The cryo-EM structure of human pre-17S U2 snRNP | ELECTRON MICROSCOPY | 2.7 | 148 |
| 9 | 7Q3L|1|2 | Human 17S U2 snRNP 5' domain | ELECTRON MICROSCOPY | 2.3 | 41 |
| 10 | 6QX9|1|2 | Structure of a human fully-assembled precatalytic spliceosome (pre-B complex). | ELECTRON MICROSCOPY | 3.28 | 94 |
| 11 | 7Q4O|1|2+7Q4O|1|h | Substrate-bound A-like U2 snRNP | ELECTRON MICROSCOPY | 2.2 | 24 |
| 12 | 7Q4P|1|2 | U2 snRNP after ATP-dependent remodelling snRNP | ELECTRON MICROSCOPY | 2.2 | 31 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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