#IFECompound(s)RNA source organismTitleMethodResolutionDate
16ZM6|1|B (rep)mitochondrial tRNAValHuman mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNAELECTRON MICROSCOPY2.592021-01-13
26ZM5|1|Bmitochondrial tRNAValHuman mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptideELECTRON MICROSCOPY2.892021-01-13
37ODR|1|Bmitochondrial tRNAValState A of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY2.92021-06-23
47OF0|1|Bmitochondrial tRNAValStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset1).ELECTRON MICROSCOPY2.22021-06-09
57ODT|1|Bmitochondrial tRNAValState C of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY3.12021-06-23
67ODS|1|Bmitochondrial tRNAValState B of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY3.12021-06-23
77O9M|1|BMT-TRNAVALHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU moduleELECTRON MICROSCOPY2.52021-06-30
87OF7|1|Bmitochondrial tRNAValStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).ELECTRON MICROSCOPY2.52021-06-23
97OF6|1|BMitochondrial tRNAValStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 2).ELECTRON MICROSCOPY2.62021-06-09
107OF4|1|Bmitochondrial tRNAValStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 1).ELECTRON MICROSCOPY2.72021-06-09
117OF3|1|BMitochondrial tRNAValStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).ELECTRON MICROSCOPY2.72021-05-19
127OF2|1|Bmitochondrial tRNAValStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.ELECTRON MICROSCOPY2.72021-06-02
137O9K|1|BMT-TRNAVALHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-TuELECTRON MICROSCOPY3.12021-06-30
147OF5|1|BMitochondrial tRNAValStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2).ELECTRON MICROSCOPY2.92021-06-09
156VMI|1|BtRNAvalHomo sapiensStructure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)ELECTRON MICROSCOPY2.962020-08-05
166VLZ|1|BtRNAvalHomo sapiensStructure of the human mitochondrial ribosome-EF-G1 complex (ClassI)ELECTRON MICROSCOPY2.972020-08-05
177QH6|1|Bmitochondrial tRNAValCryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 1ELECTRON MICROSCOPY3.082022-03-02
187A5J|1|Bmt-tRNAValStructure of the split human mitoribosomal large subunit with P-and E-site mt-tRNAsELECTRON MICROSCOPY3.12020-12-23
197OIC|1|Bmitochondrial Val tRNACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4ELECTRON MICROSCOPY3.12021-09-15
205OOL|1|Bmitochondrial tRNAValHomo sapiensStructure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNAELECTRON MICROSCOPY3.062017-09-13
215OOM|1|Bmitochondrial tRNAValHomo sapiensStructure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNAELECTRON MICROSCOPY3.032017-09-13
227L20|1|BtRNAvalCryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.ELECTRON MICROSCOPY3.152021-05-12
237OIA|1|Bmitochondrial Val tRNACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3CELECTRON MICROSCOPY3.22021-09-15
247OIB|1|Bmitochondrial Val tRNACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3DELECTRON MICROSCOPY3.32021-09-15
257OI9|1|Bmitochondrial Val tRNACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3BELECTRON MICROSCOPY3.32021-09-15
267A5H|1|Bmt-tRNAValStructure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1ELECTRON MICROSCOPY3.32020-12-23
276ZSC|1|XBmt-tRNAValHomo sapiensHuman mitochondrial ribosome in complex with E-site tRNAELECTRON MICROSCOPY3.52020-09-16
287L08|1|BtRNAVALCryo-EM structure of the human 55S mitoribosome-RRFmt complex.ELECTRON MICROSCOPY3.492021-05-12
297OI7|1|Bmitochondrial Val tRNACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2ELECTRON MICROSCOPY3.52021-09-15
307OIE|1|Bmitochondrial Val tRNACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5BELECTRON MICROSCOPY3.52021-09-15
317OI8|1|Bmitochondrial Val tRNACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3AELECTRON MICROSCOPY3.52021-09-15
326ZSD|1|XBmt-tRNAValHomo sapiensHuman mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY3.72020-09-16
336I9R|1|BtRNA ValHomo sapiensLarge subunit of the human mitochondrial ribosome in complex with Virginiamycin M and QuinupristinELECTRON MICROSCOPY3.92020-07-08
347OID|1|Bmitochondrial Val tRNACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5AELECTRON MICROSCOPY3.72021-09-15
357A5K|1|B3mt-tRNAValStructure of the human mitoribosome in the post translocation state bound to mtEF-G1ELECTRON MICROSCOPY3.72020-12-23
367A5I|1|B3mt-tRNAValStructure of the human mitoribosome with A- P-and E-site mt-tRNAsELECTRON MICROSCOPY3.72020-12-23
377OG4|1|XBmitochondrial tRNAValHuman mitochondrial ribosome in complex with P/E-tRNAELECTRON MICROSCOPY3.82021-06-23
383J7Y|1|Bmt-tRNAValHomo sapiensStructure of the large ribosomal subunit from human mitochondriaELECTRON MICROSCOPY3.42014-10-15
396ZS9|1|XBmt-tRNAValHomo sapiensHuman mitochondrial ribosome in complex with ribosome recycling factorELECTRON MICROSCOPY42020-10-14
406ZSA|1|XBmt-tRNAValHomo sapiensHuman mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNAELECTRON MICROSCOPY42020-10-21
416ZSG|1|XBmt-tRNA ValHomo sapiensHuman mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY42020-10-14
423J9M|1|Bmt-tRNAValHomo sapiensStructure of the human mitochondrial ribosome (class 1)ELECTRON MICROSCOPY3.52015-04-15

Release history

Release3.220
Date2022-03-02

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17QH6|1|BCryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 1ELECTRON MICROSCOPY3.0856
27A5I|1|B3Structure of the human mitoribosome with A- P-and E-site mt-tRNAsELECTRON MICROSCOPY3.756
37A5K|1|B3Structure of the human mitoribosome in the post translocation state bound to mtEF-G1ELECTRON MICROSCOPY3.756
43J7Y|1|BStructure of the large ribosomal subunit from human mitochondriaELECTRON MICROSCOPY3.457
53J9M|1|BStructure of the human mitochondrial ribosome (class 1)ELECTRON MICROSCOPY3.556
67OIC|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4ELECTRON MICROSCOPY3.156
77A5H|1|BStructure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1ELECTRON MICROSCOPY3.356
87A5J|1|BStructure of the split human mitoribosomal large subunit with P-and E-site mt-tRNAsELECTRON MICROSCOPY3.156
95OOL|1|BStructure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNAELECTRON MICROSCOPY3.0656
107OF7|1|BStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).ELECTRON MICROSCOPY2.556
117OF0|1|BStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset1).ELECTRON MICROSCOPY2.256
127OF3|1|BStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).ELECTRON MICROSCOPY2.756
137OF5|1|BStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2).ELECTRON MICROSCOPY2.956
147OF2|1|BStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.ELECTRON MICROSCOPY2.756
157OF6|1|BStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 2).ELECTRON MICROSCOPY2.656
167OF4|1|BStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 1).ELECTRON MICROSCOPY2.756
175OOM|1|BStructure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNAELECTRON MICROSCOPY3.0356
187OIB|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3DELECTRON MICROSCOPY3.356
197OIA|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3CELECTRON MICROSCOPY3.256
207OI7|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2ELECTRON MICROSCOPY3.556
217OI9|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3BELECTRON MICROSCOPY3.356
227OIE|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5BELECTRON MICROSCOPY3.556
237OID|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5AELECTRON MICROSCOPY3.756
247OI8|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3AELECTRON MICROSCOPY3.556
257O9M|1|BHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU moduleELECTRON MICROSCOPY2.560
267L20|1|BCryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.ELECTRON MICROSCOPY3.1556
277L08|1|BCryo-EM structure of the human 55S mitoribosome-RRFmt complex.ELECTRON MICROSCOPY3.4956
286VLZ|1|BStructure of the human mitochondrial ribosome-EF-G1 complex (ClassI)ELECTRON MICROSCOPY2.9756
296VMI|1|BStructure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)ELECTRON MICROSCOPY2.9656
306ZS9|1|XBHuman mitochondrial ribosome in complex with ribosome recycling factorELECTRON MICROSCOPY459
316ZSG|1|XBHuman mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY459
326ZSA|1|XBHuman mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNAELECTRON MICROSCOPY459
336ZSD|1|XBHuman mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY3.759
346ZSC|1|XBHuman mitochondrial ribosome in complex with E-site tRNAELECTRON MICROSCOPY3.559
357OG4|1|XBHuman mitochondrial ribosome in complex with P/E-tRNAELECTRON MICROSCOPY3.859
366I9R|1|BLarge subunit of the human mitochondrial ribosome in complex with Virginiamycin M and QuinupristinELECTRON MICROSCOPY3.960
377ODT|1|BState C of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY3.172
386ZM5|1|BHuman mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptideELECTRON MICROSCOPY2.8972
396ZM6|1|BHuman mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNAELECTRON MICROSCOPY2.5972
407ODS|1|BState B of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY3.172
417ODR|1|BState A of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY2.972
427O9K|1|BHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-TuELECTRON MICROSCOPY3.160