Equivalence class NR_4.0_77343.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7SYW|1|i (rep) | Transfer RNA | Met-tRNA-i-Met | Oryctolagus cuniculus | Eukarya | RF00005 | Structure of the wt IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(wt) | Electron microscopy | 3.7 | 2022-07-13 |
| 2 | 7SYX|1|i | Transfer RNA | Met-tRNA-i-Met | Oryctolagus cuniculus | Eukarya | RF00005 | Structure of the delta dII IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(delta dII) | Electron microscopy | 3.7 | 2022-07-13 |
| 3 | 6HCJ|1|33 | Transfer RNA | P/E tRNA, mRNA | Oryctolagus cuniculus | Eukarya | RF00005 | Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs | Electron microscopy | 3.8 | 2018-10-17 |
Release history
| Release | 3.239 |
|---|---|
| Date | 2022-07-13 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_77343.1 | NR_4.0_79851.1 | 3.239 | (1) 6HCJ|1|33 | (2) 7SYW|1|i, 7SYX|1|i | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7SYW|1|i | Structure of the wt IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(wt) | ELECTRON MICROSCOPY | 3.7 | 75 |
| 2 | 7SYX|1|i | Structure of the delta dII IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(delta dII) | ELECTRON MICROSCOPY | 3.7 | 75 |
| 3 | 6HCJ|1|33 | Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs | ELECTRON MICROSCOPY | 3.8 | 75 |