BGSU RNA Site //

Equivalence class NR_4.0_78371.1 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
11MDG|1|A (rep)5'-R(*UP*(BGM)GP*AP*GP*GP*U)-3'An Alternating Antiparallel Octaplex in an RNA Crystal StructureX-ray diffraction1.52003-08-12

Release history

Release2.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.152
Date2017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-28

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_78371.1NR_4.0_55511.12.132(1) 1MDG|1|A(0) (16) 1N7A|1|A, 1N7A|1|B, 1N7A|1|C, 1N7A|1|D, 1N7A|1|E, 1N7A|1|F, 1N7A|1|G, 1N7A|1|H, 1N7B|1|A, 1N7B|1|B, 1N7B|1|C, 1N7B|1|D, 1N7B|1|E, 1N7B|1|F, 1N7B|1|G, 1N7B|1|H

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_78371.1NR_4.0_82140.12.153(1) 1MDG|1|A(0) (16) 1N7A|1|A, 1N7A|1|B, 1N7A|1|C, 1N7A|1|D, 1N7A|1|E, 1N7A|1|F, 1N7A|1|G, 1N7A|1|H, 1N7B|1|A, 1N7B|1|B, 1N7B|1|C, 1N7B|1|D, 1N7B|1|E, 1N7B|1|F, 1N7B|1|G, 1N7B|1|H

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
11MDG|1|AAn Alternating Antiparallel Octaplex in an RNA Crystal StructureX-RAY DIFFRACTION1.55