#PDBTitleRNA source organismCompoundsMethodResolutionDate
13IVK|C (rep)Crystal Structure of the Catalytic Core of an RNA Polymerase Ribozyme Complexed with an Antigen Binding Antibody FragmentFab heavy chain, Fab light chain, class I ligase product, Fab heavy chain, Fab light chain, class I ligase productX-RAY DIFFRACTION3.12010-03-02
23HHN|CCrystal structure of class I ligase ribozyme self-ligation product, in complex with U1A RBDU1 small nuclear ribonucleoprotein A, Class I ligase ribozyme, self-ligation product, U1 small nuclear ribonucleoprotein A, Class I ligase ribozyme, self-ligation productX-RAY DIFFRACTION2.992009-11-24
33R1H|CCrystal structure of the Class I ligase ribozyme-substrate preligation complex, C47U mutant, Ca2+ boundU1 small nuclear ribonucleoprotein A, 5'-R(*UP*CP*CP*AP*GP*UP*A)-3', Class I ligase ribozyme, U1 small nuclear ribonucleoprotein A, 5'-R(*UP*CP*CP*AP*GP*UP*A)-3', Class I ligase ribozymeX-RAY DIFFRACTION3.152011-08-31
43R1L|CCrystal structure of the Class I ligase ribozyme-substrate preligation complex, C47U mutant, Mg2+ boundU1 small nuclear ribonucleoprotein A, 5'-R(*UP*CP*CP*AP*GP*UP*A)-3', Class I ligase ribozyme, U1 small nuclear ribonucleoprotein A, 5'-R(*UP*CP*CP*AP*GP*UP*A)-3', Class I ligase ribozymeX-RAY DIFFRACTION3.122011-08-31

Release history

Release0.330.340.350.360.370.380.390.400.410.420.430.440.450.460.470.480.490.500.510.520.530.540.550.560.570.580.590.600.610.620.630.640.650.660.670.680.690.700.710.720.730.740.750.760.770.780.790.800.810.820.830.840.850.860.870.880.890.900.910.920.930.940.950.960.970.980.990.1000.1010.1020.1030.1040.1050.1060.1070.1080.1090.1101.01.11.21.31.41.51.61.71.81.91.101.111.121.131.141.151.161.171.181.191.201.211.221.231.241.251.261.271.281.291.301.311.321.331.341.351.361.371.381.391.401.411.421.431.441.451.461.471.481.491.501.511.521.531.541.551.561.571.581.591.601.611.621.631.641.651.661.671.681.691.701.711.721.731.741.751.761.771.781.791.801.811.821.831.841.851.861.871.881.89
Date2011-09-032011-09-102011-09-172011-09-242011-10-012011-10-082011-10-152011-10-222011-10-292011-11-052011-11-122011-11-192011-11-262011-12-032011-12-102011-12-172011-12-242011-12-312012-01-072012-01-142012-01-212012-01-282012-02-042012-02-112012-02-182012-02-252012-03-032012-03-102012-03-172012-03-242012-03-312012-04-072012-04-142012-04-212012-04-282012-05-052012-05-122012-05-192012-05-262012-06-022012-06-092012-06-162012-06-232012-06-302012-07-072012-07-142012-07-212012-07-282012-08-042012-08-112012-08-182012-08-252012-09-012012-09-082012-09-152012-09-222012-09-292012-10-062012-10-132012-10-202012-10-272012-11-032012-11-102012-11-172012-11-242012-12-012012-12-082012-12-152012-12-222012-12-292013-01-052013-01-122013-01-192013-01-262013-02-022013-02-092013-02-162013-02-232013-03-022013-03-092013-03-162013-03-232013-03-302013-04-062013-04-132013-04-202013-04-272013-05-042013-05-112013-05-182013-05-252013-06-012013-06-082013-06-152013-06-222013-06-292013-07-062013-07-132013-07-202013-07-272013-08-032013-08-102013-08-172013-08-242013-08-312013-09-072013-09-142013-09-212013-09-282013-10-052013-10-122013-10-192013-10-262013-11-092013-11-162013-11-232013-11-302013-12-072013-12-142013-12-212013-12-282014-01-042014-01-112014-01-182014-01-252014-02-012014-02-082014-02-152014-02-222014-03-012014-03-082014-03-172014-03-222014-03-292014-04-052014-04-122014-04-192014-04-262014-05-032014-05-102014-05-172014-05-312014-06-072014-06-132014-06-202014-06-272014-07-042014-07-182014-07-252014-08-012014-08-082014-08-152014-08-222014-08-292014-09-052014-09-122014-09-192014-09-262014-10-032014-10-102014-10-172014-10-242014-10-312014-11-072014-11-142014-11-212014-11-282014-12-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This classDescendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13HHN|CCrystal structure of class I ligase ribozyme self-ligation product, in complex with U1A RBDX-RAY DIFFRACTION2.99137
23R1L|CCrystal structure of the Class I ligase ribozyme-substrate preligation complex, C47U mutant, Mg2+ boundX-RAY DIFFRACTION3.12130
33R1H|CCrystal structure of the Class I ligase ribozyme-substrate preligation complex, C47U mutant, Ca2+ boundX-RAY DIFFRACTION3.15130
43IVK|CCrystal Structure of the Catalytic Core of an RNA Polymerase Ribozyme Complexed with an Antigen Binding Antibody FragmentX-RAY DIFFRACTION3.1128