Equivalence class NR_4.0_85482.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8EA4|1|7 (rep) | sg_RNA | synthetic construct | Synthetic | V-K CAST Transpososome from Scytonema hofmanni, minor configuration | Electron microscopy | 3 | 2022-11-30 | ||
| 2 | 7PLA|1|B | sgRNA | Scytonema hofmannii | Bacteria | Cryo-EM structure of ShCas12k in complex with a sgRNA and a dsDNA target | Electron microscopy | 3.04 | 2021-12-01 | ||
| 3 | 7N3P|1|B | Single guide RNA | Scytonema hofmannii | Bacteria | Cryo-EM structure of the Cas12k-sgRNA-dsDNA complex | Electron microscopy | 3.65 | 2021-09-01 | ||
| 4 | 8EA3|1|7 | sg_RNA | synthetic construct | Synthetic | V-K CAST Transpososome from Scytonema hofmanni, major configuration | Electron microscopy | 3.7 | 2022-11-30 | ||
| 5 | 7N3O|1|B | Single guide RNA | Scytonema hofmannii | Bacteria | Cryo-EM structure of the Cas12k-sgRNA complex | Electron microscopy | 3.8 | 2021-09-01 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 8EA4|1|7 | V-K CAST Transpososome from Scytonema hofmanni, minor configuration | ELECTRON MICROSCOPY | 3 | 230 |
| 2 | 8EA3|1|7 | V-K CAST Transpososome from Scytonema hofmanni, major configuration | ELECTRON MICROSCOPY | 3.7 | 230 |
| 3 | 7PLA|1|B | Cryo-EM structure of ShCas12k in complex with a sgRNA and a dsDNA target | ELECTRON MICROSCOPY | 3.04 | 217 |
| 4 | 7N3O|1|B | Cryo-EM structure of the Cas12k-sgRNA complex | ELECTRON MICROSCOPY | 3.8 | 222 |
| 5 | 7N3P|1|B | Cryo-EM structure of the Cas12k-sgRNA-dsDNA complex | ELECTRON MICROSCOPY | 3.65 | 229 |