#IFECompound(s)RNA source organismTitleMethodResolutionDate
17A9N|1|K+ 7A9N|1|L (rep)RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION1.6022021-05-26
26ZRS|1|K+ 6ZRS|1|LRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION1.522021-05-26
37A9O|1|K+ 7A9O|1|LRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION1.6012021-05-26
46ZR1|1|K+ 6ZR1|1|LRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION1.5282021-05-26
56ZQ9|1|K+ 6ZQ9|1|LRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION1.52021-05-26
66ZPF|1|K+ 6ZPF|1|LRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION1.4422021-05-26
76ZWU|1|M+ 6ZWU|1|NRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION1.5272021-05-26
87A9T|1|K+ 7A9T|1|LRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION1.72021-05-26
96ZW3|1|M+ 6ZW3|1|NRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION1.5222021-05-26
106ZX5|1|K+ 6ZX5|1|LRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION1.5232021-05-26
117A9Q|1|K+ 7A9Q|1|LRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION2.1852021-05-26
12439D|1|A+ 439D|1|BRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3', 5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'X-RAY DIFFRACTION1.62001-09-14
137A9L|1|M+ 7A9L|1|NRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION1.982021-05-26
146ZRL|1|M+ 6ZRL|1|NRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION1.532021-05-26
156ZX8|1|K+ 6ZX8|1|LRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION1.9812021-05-26
167A9S|1|K+ 7A9S|1|LRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION2.292021-05-26
177A9R|1|M+ 7A9R|1|NRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION2.4552021-05-26
187A9P|1|M+ 7A9P|1|NRNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3')Racemic compound of RNA duplexes.X-RAY DIFFRACTION1.9852021-05-26

Release history

Release3.180
Date2021-05-26

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17A9P|1|M+7A9P|1|NRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.9858
26ZRL|1|M+6ZRL|1|NRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.538
36ZW3|1|M+6ZW3|1|NRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.5228
46ZWU|1|M+6ZWU|1|NRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.5278
57A9L|1|M+7A9L|1|NRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.988
67A9R|1|M+7A9R|1|NRacemic compound of RNA duplexes.X-RAY DIFFRACTION2.4558
77A9S|1|K+7A9S|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION2.298
87A9O|1|K+7A9O|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.6018
96ZR1|1|K+6ZR1|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.5288
107A9T|1|K+7A9T|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.78
117A9N|1|K+7A9N|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.6028
126ZRS|1|K+6ZRS|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.528
136ZPF|1|K+6ZPF|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.4428
146ZX5|1|K+6ZX5|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.5238
156ZQ9|1|K+6ZQ9|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.58
166ZX8|1|K+6ZX8|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.9818
177A9Q|1|K+7A9Q|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION2.1858
18439D|1|A+439D|1|B5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3', 5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'X-RAY DIFFRACTION1.68