#IFECompound(s)RNA source organismTitleMethodResolutionDate
14IOA|1|X (rep)23S ribosomal RNADeinococcus radioduransCrystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION3.22013-03-06
24IO9|1|X23S ribosomal RNADeinococcus radioduransCrystal structure of compound 4d bound to large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION3.22013-03-06
34IOC|1|X23S ribosomal RNADeinococcus radioduransCrystal structure of compound 4f bound to large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION3.62013-03-06
45DM6|1|X23S ribosomal RNADeinococcus radioduransCrystal structure of the 50S ribosomal subunit from Deinococcus radioduransX-RAY DIFFRACTION2.92015-11-11
52ZJR|1|Xribosomal 23S RNADeinococcus radioduransRefined native structure of the large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION2.912008-06-17
63CF5|1|XRRNA-23S RIBOSOMAL RNADeinococcus radioduransThiopeptide antibiotic Thiostrepton bound to the large ribosomal subunit of Deinococcus radioduransX-RAY DIFFRACTION3.32008-06-17
75JVG|1|X23S ribosomal RNADeinococcus radioduransThe large ribosomal subunit from Deinococcus radiodurans in complex with avilamycinX-RAY DIFFRACTION3.432016-11-09
85JVH|1|X23S ribosomal RNADeinococcus radioduransThe crystal structure large ribosomal subunit (50S) of Deinococcus radiodurans in complex with evernimicinX-RAY DIFFRACTION3.582016-11-09
92ZJP|1|XRIBOSOMAL 23S RNADeinococcus radioduransThiopeptide antibiotic Nosiheptide bound to the large ribosomal subunit of Deinococcus radioduransX-RAY DIFFRACTION3.72008-06-17
102ZJQ|1|Xribosomal 23S RNADeinococcus radioduransInteraction of L7 with L11 induced by Microccocin binding to the Deinococcus radiodurans 50S subunitX-RAY DIFFRACTION3.32008-06-17
114U67|1|X23s RNADeinococcus radioduransCrystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22X-RAY DIFFRACTION3.652015-08-05
124WFN|1|X23S ribosomal RNADeinococcus radioduransCrystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22 in complex with erythromycinX-RAY DIFFRACTION3.542015-12-23
133DLL|1|XrRNA-23S ribosomal RNADeinococcus radioduransThe oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA positioningX-RAY DIFFRACTION3.52008-09-16
145DM7|1|X23S ribosomal RNADeinococcus radioduransCrystal structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with hygromycin AX-RAY DIFFRACTION32015-11-11
152AAR|1|023S ribosomal RNADeinococcus radioduransStructure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.X-RAY DIFFRACTION3.52005-08-23
162OGM|1|023S ribosomal RNADeinococcus radioduransThe crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative SB-571519X-RAY DIFFRACTION3.52007-05-01
173PIO|1|XRIBOSOMAL 23S RNADeinococcus radioduransCrystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunitX-RAY DIFFRACTION3.252011-02-23
183JQ4|1|A23S ribosomal RNADeinococcus radioduransThe structure of the complex of the large ribosomal subunit from D. Radiodurans with the antibiotic lankacidinX-RAY DIFFRACTION3.522010-09-08
192D3O|1|023S RIBOSOMAL RNADeinococcus radioduransStructure of Ribosome Binding Domain of the Trigger Factor on the 50S ribosomal subunit from D. radioduransX-RAY DIFFRACTION3.352005-12-06
201Y69|1|023S ribosomal RNADeinococcus radioduransRRF domain I in complex with the 50S ribosomal subunit from Deinococcus radioduransX-RAY DIFFRACTION3.332005-03-01
213PIP|1|XRIBOSOMAL 23S RNADeinococcus radioduransCrystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunitX-RAY DIFFRACTION3.452011-02-23
222OGO|1|023S ribosomal RNADeinococcus radioduransThe crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative retapamulin (SB-275833)X-RAY DIFFRACTION3.662007-05-01
231JZY|1|A23S rRNADeinococcus radioduransStructural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in EubacteriaX-RAY DIFFRACTION3.52001-10-26
241K01|1|A23S rRNADeinococcus radioduransStructural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in EubacteriaX-RAY DIFFRACTION3.52001-10-26
251JZX|1|A23S rRNADeinococcus radioduransStructural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in EubacteriaX-RAY DIFFRACTION3.12001-10-26
261JZZ|1|A23S rRNADeinococcus radioduransStructural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in EubacteriaX-RAY DIFFRACTION3.82001-10-26
271J5A|1|A23S RRNADeinococcus radioduransSTRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTER IN EUBACTERIAX-RAY DIFFRACTION3.52002-03-08
282O44|1|A23S rRNADeinococcus radioduransStructure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycinX-RAY DIFFRACTION3.32007-12-04
292OGN|1|023S ribosomal RNADeinococcus radioduransThe crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative SB-280080X-RAY DIFFRACTION3.562007-05-01
301NWX|1|023S RIBOSOMAL RNADeinococcus radioduransCOMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH ABT-773X-RAY DIFFRACTION3.52003-03-18
311OND|1|023S RIBOSOMAL RNADeinococcus radioduransTHE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TROLEANDOMYCIN MACROLIDE ANTIBIOTICX-RAY DIFFRACTION3.42003-04-15
321NWY|1|023S RIBOSOMAL RRNADeinococcus radioduransCOMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCINX-RAY DIFFRACTION3.32003-03-18
331NKW|1|023S ribosomal RNADeinococcus radioduransCrystal Structure Of The Large Ribosomal Subunit From Deinococcus RadioduransX-RAY DIFFRACTION3.12003-02-11
343FWO|1|A23S RIBOSOMAL RNADeinococcus radioduransThe large ribosomal subunit from Deinococcus radiodurans complexed with MethymycinX-RAY DIFFRACTION3.712010-01-19
351NJO|1|023S ribosomal RNA, RNA ACC(Puromycin)Deinococcus radioduransThe crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with a short substrate analog ACCPuromycin (ACCP)X-RAY DIFFRACTION3.72003-02-11
361P9X|1|023S RIBOSOMAL RNADeinococcus radioduransTHE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TELITHROMYCIN KETOLIDE ANTIBIOTICX-RAY DIFFRACTION3.42003-08-05
371NJP|1|023S ribosomal RNADeinococcus radioduransThe crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with a tRNA acceptor stem mimic (ASM)X-RAY DIFFRACTION3.52003-02-11
381NJM|1|023S ribosomal RNADeinococcus radioduransThe crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with a tRNA acceptor stem mimic (ASM) and the antibiotic sparsomycinX-RAY DIFFRACTION3.62003-02-11
391NJN|1|023S ribosomal RNADeinococcus radioduransThe crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with the antibiotic sparsomycinX-RAY DIFFRACTION3.72003-02-11
402O43|1|A23S rRNADeinococcus radioduransStructure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide erythromycylamineX-RAY DIFFRACTION3.62007-12-04
411SM1|1|023S RIBOSOMAL RNADeinococcus radioduransCOMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRISTINX-RAY DIFFRACTION3.422004-08-03
421XBP|1|023S RIBOSOMAL RNADeinococcus radioduransInhibition of peptide bond formation by pleuromutilins: The structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with TiamulinX-RAY DIFFRACTION3.52005-03-01
431Z58|1|223S RIBOSOMAL RNADeinococcus radioduransCrystal structure of a complex of the ribosome large subunit with rapamycinX-RAY DIFFRACTION3.82005-06-28
442O45|1|A23S rRNADeinococcus radioduransStructure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874X-RAY DIFFRACTION3.62007-12-04

Release history

Release2.1012.1022.1032.1042.1052.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.158
Date2016-11-112016-11-182016-11-252016-12-022016-12-092016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-08

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
12D3O|1|0Structure of Ribosome Binding Domain of the Trigger Factor on the 50S ribosomal subunit from D. radioduransX-RAY DIFFRACTION3.352802
25DM7|1|XCrystal structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with hygromycin AX-RAY DIFFRACTION32780
35DM6|1|XCrystal structure of the 50S ribosomal subunit from Deinococcus radioduransX-RAY DIFFRACTION2.92780
45JVG|1|XThe large ribosomal subunit from Deinococcus radiodurans in complex with avilamycinX-RAY DIFFRACTION3.432711
55JVH|1|XThe crystal structure large ribosomal subunit (50S) of Deinococcus radiodurans in complex with evernimicinX-RAY DIFFRACTION3.582658
64WFN|1|XCrystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22 in complex with erythromycinX-RAY DIFFRACTION3.542680
74U67|1|XCrystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22X-RAY DIFFRACTION3.652667
84IOC|1|XCrystal structure of compound 4f bound to large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION3.62686
94IO9|1|XCrystal structure of compound 4d bound to large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION3.22686
104IOA|1|XCrystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION3.22686
113DLL|1|XThe oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA positioningX-RAY DIFFRACTION3.52686
122ZJQ|1|XInteraction of L7 with L11 induced by Microccocin binding to the Deinococcus radiodurans 50S subunitX-RAY DIFFRACTION3.32686
133CF5|1|XThiopeptide antibiotic Thiostrepton bound to the large ribosomal subunit of Deinococcus radioduransX-RAY DIFFRACTION3.32686
142ZJP|1|XThiopeptide antibiotic Nosiheptide bound to the large ribosomal subunit of Deinococcus radioduransX-RAY DIFFRACTION3.72686
152ZJR|1|XRefined native structure of the large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION2.912686
163PIO|1|XCrystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunitX-RAY DIFFRACTION3.252657
173PIP|1|XCrystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunitX-RAY DIFFRACTION3.452644
181K01|1|AStructural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in EubacteriaX-RAY DIFFRACTION3.52774
191JZX|1|AStructural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in EubacteriaX-RAY DIFFRACTION3.12774
201JZY|1|AStructural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in EubacteriaX-RAY DIFFRACTION3.52774
211JZZ|1|AStructural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in EubacteriaX-RAY DIFFRACTION3.82774
221J5A|1|ASTRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTER IN EUBACTERIAX-RAY DIFFRACTION3.52774
231P9X|1|0THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TELITHROMYCIN KETOLIDE ANTIBIOTICX-RAY DIFFRACTION3.42738
241NJM|1|0The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with a tRNA acceptor stem mimic (ASM) and the antibiotic sparsomycinX-RAY DIFFRACTION3.62766
251NJN|1|0The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with the antibiotic sparsomycinX-RAY DIFFRACTION3.72766
261NJO|1|0The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with a short substrate analog ACCPuromycin (ACCP)X-RAY DIFFRACTION3.72766
271NJP|1|0The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with a tRNA acceptor stem mimic (ASM)X-RAY DIFFRACTION3.52766
281NWY|1|0COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCINX-RAY DIFFRACTION3.32766
291NWX|1|0COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH ABT-773X-RAY DIFFRACTION3.52766
301NKW|1|0Crystal Structure Of The Large Ribosomal Subunit From Deinococcus RadioduransX-RAY DIFFRACTION3.12766
311OND|1|0THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TROLEANDOMYCIN MACROLIDE ANTIBIOTICX-RAY DIFFRACTION3.42765
321XBP|1|0Inhibition of peptide bond formation by pleuromutilins: The structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with TiamulinX-RAY DIFFRACTION3.52766
331SM1|1|0COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRISTINX-RAY DIFFRACTION3.422766
341Y69|1|0RRF domain I in complex with the 50S ribosomal subunit from Deinococcus radioduransX-RAY DIFFRACTION3.332766
351Z58|1|2Crystal structure of a complex of the ribosome large subunit with rapamycinX-RAY DIFFRACTION3.82766
362O45|1|AStructure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874X-RAY DIFFRACTION3.62766
373JQ4|1|AThe structure of the complex of the large ribosomal subunit from D. Radiodurans with the antibiotic lankacidinX-RAY DIFFRACTION3.522765
382AAR|1|0Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.X-RAY DIFFRACTION3.52766
392OGN|1|0The crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative SB-280080X-RAY DIFFRACTION3.562766
402OGM|1|0The crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative SB-571519X-RAY DIFFRACTION3.52766
412OGO|1|0The crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative retapamulin (SB-275833)X-RAY DIFFRACTION3.662765
422O43|1|AStructure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide erythromycylamineX-RAY DIFFRACTION3.62766
432O44|1|AStructure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycinX-RAY DIFFRACTION3.32766
443FWO|1|AThe large ribosomal subunit from Deinococcus radiodurans complexed with MethymycinX-RAY DIFFRACTION3.712765