#PDBTitleRNA source organismCompoundsMethodResolutionDate
14FE5|1|B (rep)Crystal structure of the xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthinexpt-pbuX guanine riboswitch aptamer domainX-RAY DIFFRACTION1.322012-06-27
23FO4|1|ACrystal structure of guanine riboswitch C74U mutant bound to 6-chloroguanineGuanine riboswitch C74U mutantX-RAY DIFFRACTION1.92009-06-23
33GOG|1|AGuanine riboswitch A21G,U75C mutant bound to 6-chloroguanineGuanine riboswitchX-RAY DIFFRACTION2.12009-06-23
42XNZ|1|AXPT-PBUX C74U RIBOSWITCH FROM B. SUBTILIS BOUND TO ACETOGUANAMINE IDENTIFIED BY VIRTUAL SCREENINGBacillus subtilisGUANINE RIBOSWITCHX-RAY DIFFRACTION1.592011-04-06
52EEV|1|AGuanine riboswitch U22C, A52G mutant bound to hypoxanthineguanine riboswitchX-RAY DIFFRACTION1.952007-11-13
62G9C|1|AModified pyrimidines Specifically bind the purine riboswitchguanine riboswitchX-RAY DIFFRACTION1.72006-11-21
73FO6|1|ACrystal structure of guanine riboswitch bound to 6-O-methylguanineGuanine riboswitchX-RAY DIFFRACTION1.92009-06-23
83GAO|1|ACrystal structure of the guanine riboswitch bound to xanthine.Guanine riboswitchX-RAY DIFFRACTION1.92009-06-23
93GER|1|AGuanine riboswitch bound to 6-chloroguanineGuanine riboswitchX-RAY DIFFRACTION1.72009-06-23
102EET|1|AGuanine Riboswitch A21G, U75C mutant bound to hypoxanthineGuanine RiboswitchX-RAY DIFFRACTION1.952007-11-13
114FEN|1|BCrystal structure of the A24U/U25A/A46G mutant xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthineA24U/U25A/A46G mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domainX-RAY DIFFRACTION1.352013-02-27
124FEO|1|BCrystal structure of the AU25A/A46G/C74U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with 2,6-diaminopurineU25A/A46G/C74U mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domainX-RAY DIFFRACTION1.62013-02-27
134FEP|1|BCrystal structure of the A24U/U25A/A46G/C74U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with 2,6-diaminopurineA24U/U25A/A46G/C74U mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domainX-RAY DIFFRACTION1.652013-02-27
142EEW|1|AGuanine Riboswitch U47C mutant bound to hypoxanthineGuanine riboswitchX-RAY DIFFRACTION2.252007-11-13
152EES|1|AGuanine riboswitch A21U, U75A mutant bound to hypoxanthineGuanine riboswitchX-RAY DIFFRACTION1.752007-11-13
162EEU|1|AGuanine riboswitch U22A, A52U mutant bound to hypoxanthineGuanine riboswitchX-RAY DIFFRACTION1.952007-11-13
173GES|1|ACrystal structure of the guanine riboswitch C74U mutant bound to 6-O-methylguanineGuanine riboswitchX-RAY DIFFRACTION2.152009-06-23
183DS7|1|AStructure of an RNA-2'-deoxyguanosine complex67-MER, 67-MERX-RAY DIFFRACTION1.852009-02-17
194FEJ|1|BCrystal structure of the A24U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthineA24U mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domainX-RAY DIFFRACTION1.52013-02-27
205C7U|1|B5'-monophosphate wt Guanine Riboswitch bound to hypoxanthine.Bacillus subtilis5'-monophosphate wt guanine riboswitchX-RAY DIFFRACTION3.052015-08-12
213DS7|1|BStructure of an RNA-2'-deoxyguanosine complex67-MER, 67-MERX-RAY DIFFRACTION1.852009-02-17
224FEL|1|BCrystal structure of the U25A/A46G mutant of the xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthineU25A/A46G mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domainX-RAY DIFFRACTION1.62013-02-27
232XO0|1|AXPT-PBUX C74U RIBOSWITCH FROM B. SUBTILIS BOUND TO 24-diamino-1,3,5- triazine IDENTIFIED BY VIRTUAL SCREENINGBacillus subtilisGUANINE RIBOSWITCHX-RAY DIFFRACTION1.72011-04-06
242XNW|1|AXPT-PBUX C74U RIBOSWITCH FROM B. SUBTILIS BOUND TO A TRIAZOLO- TRIAZOLE-DIAMINE LIGAND IDENTIFIED BY VIRTUAL SCREENINGBacillus subtilisGUANINE RIBOSWITCHX-RAY DIFFRACTION1.52011-04-06
252XO1|1|AXPT-PBUX C74U RIBOSWITCH FROM B. SUBTILIS BOUND TO N6-methyladenineBacillus subtilisGUANINE RIBOSWITCHX-RAY DIFFRACTION1.62011-04-06
263GOT|1|AGuanine riboswitch C74U mutant bound to 2-fluoroadenine.Guanine riboswitchX-RAY DIFFRACTION1.952009-06-23
273G4M|1|ACrystal structure of guanine riboswitch bound to 2-aminopurineGuanine riboswitchX-RAY DIFFRACTION2.42009-06-23
282B57|1|AGuanine Riboswitch C74U mutant bound to 2,6-diaminopurine65-MERX-RAY DIFFRACTION2.152006-05-23
295C7W|1|C5'-monophosphate Z:P Guanine Riboswitch bound to hypoxanthine.synthetic construct5'-monophosphate Z:P guanine riboswitchX-RAY DIFFRACTION3.222015-08-12

Release history

Release2.362.372.382.392.402.412.422.432.442.452.462.472.482.492.502.512.522.532.542.552.562.572.582.592.602.612.622.632.642.652.662.672.682.692.702.712.722.732.742.752.762.772.782.792.802.812.822.832.842.852.862.872.882.892.902.912.922.932.942.952.962.972.982.992.1002.1012.1022.1032.1042.1052.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.151
Date2015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-162015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-222016-01-292016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-012016-04-082016-04-152016-04-222016-04-292016-05-062016-05-132016-05-202016-05-272016-06-032016-06-102016-06-172016-06-242016-07-012016-07-082016-07-152016-07-222016-07-292016-08-052016-08-122016-08-192016-08-262016-09-022016-09-092016-09-162016-09-232016-09-302016-10-072016-10-142016-10-212016-10-282016-11-042016-11-112016-11-182016-11-252016-12-022016-12-092016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-21

Children

This classDescendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15C7W|1|C5'-monophosphate Z:P Guanine Riboswitch bound to hypoxanthine.X-RAY DIFFRACTION3.2265
25C7U|1|B5'-monophosphate wt Guanine Riboswitch bound to hypoxanthine.X-RAY DIFFRACTION3.0567
33DS7|1|BStructure of an RNA-2'-deoxyguanosine complexX-RAY DIFFRACTION1.8567
42EES|1|AGuanine riboswitch A21U, U75A mutant bound to hypoxanthineX-RAY DIFFRACTION1.7567
53FO4|1|ACrystal structure of guanine riboswitch C74U mutant bound to 6-chloroguanineX-RAY DIFFRACTION1.963
63GER|1|AGuanine riboswitch bound to 6-chloroguanineX-RAY DIFFRACTION1.767
72XNZ|1|AXPT-PBUX C74U RIBOSWITCH FROM B. SUBTILIS BOUND TO ACETOGUANAMINE IDENTIFIED BY VIRTUAL SCREENINGX-RAY DIFFRACTION1.5965
82G9C|1|AModified pyrimidines Specifically bind the purine riboswitchX-RAY DIFFRACTION1.767
94FEJ|1|BCrystal structure of the A24U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthineX-RAY DIFFRACTION1.567
102XO1|1|AXPT-PBUX C74U RIBOSWITCH FROM B. SUBTILIS BOUND TO N6-methyladenineX-RAY DIFFRACTION1.665
114FE5|1|BCrystal structure of the xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthineX-RAY DIFFRACTION1.3267
122EET|1|AGuanine Riboswitch A21G, U75C mutant bound to hypoxanthineX-RAY DIFFRACTION1.9567
133GOG|1|AGuanine riboswitch A21G,U75C mutant bound to 6-chloroguanineX-RAY DIFFRACTION2.165
143FO6|1|ACrystal structure of guanine riboswitch bound to 6-O-methylguanineX-RAY DIFFRACTION1.967
152EEW|1|AGuanine Riboswitch U47C mutant bound to hypoxanthineX-RAY DIFFRACTION2.2567
163GES|1|ACrystal structure of the guanine riboswitch C74U mutant bound to 6-O-methylguanineX-RAY DIFFRACTION2.1567
172EEV|1|AGuanine riboswitch U22C, A52G mutant bound to hypoxanthineX-RAY DIFFRACTION1.9567
183GAO|1|ACrystal structure of the guanine riboswitch bound to xanthine.X-RAY DIFFRACTION1.967
192EEU|1|AGuanine riboswitch U22A, A52U mutant bound to hypoxanthineX-RAY DIFFRACTION1.9567
202XNW|1|AXPT-PBUX C74U RIBOSWITCH FROM B. SUBTILIS BOUND TO A TRIAZOLO- TRIAZOLE-DIAMINE LIGAND IDENTIFIED BY VIRTUAL SCREENINGX-RAY DIFFRACTION1.565
212XO0|1|AXPT-PBUX C74U RIBOSWITCH FROM B. SUBTILIS BOUND TO 24-diamino-1,3,5- triazine IDENTIFIED BY VIRTUAL SCREENINGX-RAY DIFFRACTION1.765
223GOT|1|AGuanine riboswitch C74U mutant bound to 2-fluoroadenine.X-RAY DIFFRACTION1.9567
232B57|1|AGuanine Riboswitch C74U mutant bound to 2,6-diaminopurineX-RAY DIFFRACTION2.1565
244FEL|1|BCrystal structure of the U25A/A46G mutant of the xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthineX-RAY DIFFRACTION1.667
254FEP|1|BCrystal structure of the A24U/U25A/A46G/C74U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with 2,6-diaminopurineX-RAY DIFFRACTION1.6567
264FEN|1|BCrystal structure of the A24U/U25A/A46G mutant xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthineX-RAY DIFFRACTION1.3567
274FEO|1|BCrystal structure of the AU25A/A46G/C74U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with 2,6-diaminopurineX-RAY DIFFRACTION1.667
283DS7|1|AStructure of an RNA-2'-deoxyguanosine complexX-RAY DIFFRACTION1.8567
293G4M|1|ACrystal structure of guanine riboswitch bound to 2-aminopurineX-RAY DIFFRACTION2.467