#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16MDZ|1|E+ 6MDZ|1|C (rep)RNA (5'-R(P*AP*AP*AP*CP*AP*CP*CP*AP*UP*UP*UP*CP*CP*AP*CP*AP*CP*UP*CP*CP*AP*AP*A)-3'), RNA (5'-R(P*UP*GP*GP*AP*GP*UP*GP*UP*GP*AP*CP*AP*AP*UP*GP*GP*UP*GP*UP*U)-3')unidentifiedHuman Argonaute2-miR-122 bound to a target RNA with two central mismatches (bu2)X-ray diffraction3.42019-08-07
26MDZ|1|F+ 6MDZ|1|DRNA (5'-R(P*AP*AP*AP*CP*AP*CP*CP*AP*UP*UP*UP*CP*CP*AP*CP*AP*CP*UP*CP*CP*AP*AP*A)-3'), RNA (5'-R(P*UP*GP*GP*AP*GP*UP*GP*UP*GP*AP*CP*AP*AP*UP*GP*GP*UP*GP*UP*U)-3')unidentifiedHuman Argonaute2-miR-122 bound to a target RNA with two central mismatches (bu2)X-ray diffraction3.42019-08-07
36MFR|1|F+ 6MFR|1|DRNA (5'-R(P*AP*AP*AP*CP*AP*CP*CP*AP*UP*UP*UP*UP*CP*AP*CP*AP*CP*UP*CP*CP*AP*AP*A)-3'), RNA (5'-R(P*UP*GP*GP*AP*GP*UP*GP*UP*GP*AP*CP*AP*AP*UP*GP*GP*UP*GP*UP*U)-3')unidentifiedHuman Argonaute2-miR-122 bound to a target RNA with three central mismatches (bu3)X-ray diffraction3.62019-08-07
46MFR|1|E+ 6MFR|1|CRNA (5'-R(P*AP*AP*AP*CP*AP*CP*CP*AP*UP*UP*UP*UP*CP*AP*CP*AP*CP*UP*CP*CP*AP*AP*A)-3'), RNA (5'-R(P*UP*GP*GP*AP*GP*UP*GP*UP*GP*AP*CP*AP*AP*UP*GP*GP*UP*GP*UP*U)-3')unidentifiedHuman Argonaute2-miR-122 bound to a target RNA with three central mismatches (bu3)X-ray diffraction3.62019-08-07

Release history

Release3.3333.3343.3353.3363.3373.3383.3393.3403.3413.3423.3433.344
Date2024-05-012024-05-082024-05-152024-05-222024-05-292024-06-052024-06-122024-06-192024-06-262024-07-032024-07-102024-07-17

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16MFR|1|E+6MFR|1|CHuman Argonaute2-miR-122 bound to a target RNA with three central mismatches (bu3)X-RAY DIFFRACTION3.622
26MDZ|1|E+6MDZ|1|CHuman Argonaute2-miR-122 bound to a target RNA with two central mismatches (bu2)X-RAY DIFFRACTION3.423
36MFR|1|F+6MFR|1|DHuman Argonaute2-miR-122 bound to a target RNA with three central mismatches (bu3)X-RAY DIFFRACTION3.616
46MDZ|1|F+6MDZ|1|DHuman Argonaute2-miR-122 bound to a target RNA with two central mismatches (bu2)X-RAY DIFFRACTION3.417
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