#PDBTitleRNA source organismCompoundsMethodResolutionDate
15GMF|1|H (rep)Crystal structure of monkey TLR7 in complex with guanosine and polyUHomo sapiensToll-like receptor 7, Toll-like receptor 7, Toll-like receptor 7, Toll-like receptor 7, RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3')X-RAY DIFFRACTION2.52016-11-02
25GMG|1|CCrystal structure of monkey TLR7 in complex with loxoribine and polyUHomo sapiensToll-like receptor 7, Toll-like receptor 7, RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3')X-RAY DIFFRACTION2.62016-11-02
35GMG|1|DCrystal structure of monkey TLR7 in complex with loxoribine and polyUHomo sapiensToll-like receptor 7, Toll-like receptor 7, RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3')X-RAY DIFFRACTION2.62016-11-02
43IE1|1|ECrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNARibonuclease TTHA0252, Ribonuclease TTHA0252, Ribonuclease TTHA0252, Ribonuclease TTHA0252, RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3')X-RAY DIFFRACTION2.852009-08-04
51NB7|1|EHC-J4 RNA polymerase complexed with short RNA template strandpolyprotein, polyprotein, 5'-R(*UP*UP*UP*U)-3', 5'-R(*UP*UP*UP*U)-3'X-RAY DIFFRACTION2.92003-03-25
65GMF|1|ECrystal structure of monkey TLR7 in complex with guanosine and polyUHomo sapiensToll-like receptor 7, Toll-like receptor 7, Toll-like receptor 7, Toll-like receptor 7, RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3')X-RAY DIFFRACTION2.52016-11-02
73IE1|1|FCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNARibonuclease TTHA0252, Ribonuclease TTHA0252, Ribonuclease TTHA0252, Ribonuclease TTHA0252, RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3')X-RAY DIFFRACTION2.852009-08-04
81NB7|1|FHC-J4 RNA polymerase complexed with short RNA template strandpolyprotein, polyprotein, 5'-R(*UP*UP*UP*U)-3', 5'-R(*UP*UP*UP*U)-3'X-RAY DIFFRACTION2.92003-03-25
95GMF|1|FCrystal structure of monkey TLR7 in complex with guanosine and polyUHomo sapiensToll-like receptor 7, Toll-like receptor 7, Toll-like receptor 7, Toll-like receptor 7, RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3')X-RAY DIFFRACTION2.52016-11-02
105GMF|1|GCrystal structure of monkey TLR7 in complex with guanosine and polyUHomo sapiensToll-like receptor 7, Toll-like receptor 7, Toll-like receptor 7, Toll-like receptor 7, RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3')X-RAY DIFFRACTION2.52016-11-02
113IE1|1|HCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNARibonuclease TTHA0252, Ribonuclease TTHA0252, Ribonuclease TTHA0252, Ribonuclease TTHA0252, RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3')X-RAY DIFFRACTION2.852009-08-04
122QQP|1|RCrystal Structure of Authentic Providence VirusLarge Capsid protein, Small capsid protein, Large Capsid protein, Small capsid protein, Large Capsid protein, Small capsid protein, Large Capsid protein, Small capsid protein, RNA (5'-R(*UP*UP*UP*U)-3')X-RAY DIFFRACTION3.82009-01-20
134DR7|1|VCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, crystallographically disordered near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position, and streptomycin boundThermus thermophilus16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein THX, 5'-R(*UP*UP*UP*U)-3', 5'-R(*GP*CP*CP*UP*GP*GP*AP*AP*AP*GP*(PSU))-3', 5'-R(P*UP*GP*GP*AP*AP*AP*GP*(PSU))-3', 5'-R(P*UP*UP*U)-3'X-RAY DIFFRACTION3.752012-11-14
143IE1|1|GCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNARibonuclease TTHA0252, Ribonuclease TTHA0252, Ribonuclease TTHA0252, Ribonuclease TTHA0252, RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*U)-3')X-RAY DIFFRACTION2.852009-08-04

Release history

Release2.1002.1012.1022.1032.1042.1052.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.151
Date2016-11-042016-11-112016-11-182016-11-252016-12-022016-12-092016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-21

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_96683.1NR_4.0_85948.12.100(8) 3IE1|1|F, 3IE1|1|E, 2QQP|1|R, 4DR7|1|V, 1NB7|1|F, 3IE1|1|H, 1NB7|1|E, 3IE1|1|G(6) 5GMG|1|C, 5GMF|1|H, 5GMF|1|G, 5GMF|1|F, 5GMF|1|E, 5GMG|1|D(0)

Children

This classDescendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15GMG|1|DCrystal structure of monkey TLR7 in complex with loxoribine and polyUX-RAY DIFFRACTION2.64
25GMF|1|HCrystal structure of monkey TLR7 in complex with guanosine and polyUX-RAY DIFFRACTION2.54
35GMF|1|FCrystal structure of monkey TLR7 in complex with guanosine and polyUX-RAY DIFFRACTION2.54
45GMF|1|ECrystal structure of monkey TLR7 in complex with guanosine and polyUX-RAY DIFFRACTION2.54
55GMF|1|GCrystal structure of monkey TLR7 in complex with guanosine and polyUX-RAY DIFFRACTION2.54
65GMG|1|CCrystal structure of monkey TLR7 in complex with loxoribine and polyUX-RAY DIFFRACTION2.64
73IE1|1|HCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.854
83IE1|1|ECrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.854
93IE1|1|FCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.854
104DR7|1|VCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, crystallographically disordered near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position, and streptomycin boundX-RAY DIFFRACTION3.754
112QQP|1|RCrystal Structure of Authentic Providence VirusX-RAY DIFFRACTION3.84
123IE1|1|GCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.852
131NB7|1|FHC-J4 RNA polymerase complexed with short RNA template strandX-RAY DIFFRACTION2.94
141NB7|1|EHC-J4 RNA polymerase complexed with short RNA template strandX-RAY DIFFRACTION2.94