BGSU RNA Site //

Equivalence class NR_4.0_98632.5 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
17P7Q|1|A (rep)Large subunit ribosomal RNA23S rRNAEnterococcus faecalisBacteriaRF02541E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volumeElectron microscopy2.42022-02-23
27NHK|1|ALarge subunit ribosomal RNA23S rRNAEnterococcus faecalisBacteriaRF02541LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalisElectron microscopy2.92021-05-05
37P7T|1|ALarge subunit ribosomal RNA23S rRNAEnterococcus faecalisBacteriaRF02541PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state IIIElectron microscopy2.92022-02-23
47P7S|1|ALarge subunit ribosomal RNA23S rRNAEnterococcus faecalisBacteriaRF02541PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state IIElectron microscopy32022-02-23
56W6P|1|ALarge subunit ribosomal RNA23S rRNAEnterococcus faecalisBacteriaRF02541MultiBody Refinement of 70S Ribosome from Enterococcus faecalisElectron microscopy2.92020-10-14
66WU9|1|ALarge subunit ribosomal RNA23S rRNAEnterococcus faecalis OG1RFBacteriaRF0254150S subunit of 70S Ribosome Enterococcus faecalis MultiBody refinementElectron microscopy2.92020-11-04
77P7U|1|ALarge subunit ribosomal RNA23S rRNAEnterococcus faecalisBacteriaRF02541E. faecalis 70S ribosome with P-tRNA, state IVElectron microscopy3.12022-02-23
86O90|1|ALarge subunit ribosomal RNA23S rRNAEnterococcus faecalisBacteriaRF02541Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05Electron microscopy3.492020-09-23
96O8Z|1|ALarge subunit ribosomal RNA23S rRNAEnterococcus faecalisBacteriaRF02541Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04Electron microscopy3.492020-09-16
106O8W|1|ALarge subunit ribosomal RNA50S subunitEnterococcus faecalisBacteriaRF02541Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01Electron microscopy3.532020-09-23
116O8X|1|ALarge subunit ribosomal RNA23S rRNAEnterococcus faecalisBacteriaRF02541Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02Electron microscopy3.682020-09-23

Release history

Release3.2193.2203.2213.222
Date2022-02-232022-03-022022-03-092022-03-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_98632.5NR_4.0_98632.43.219(7) 6O8Z|1|A, 6O8X|1|A, 6O8W|1|A, 7NHK|1|A, 6WU9|1|A, 6W6P|1|A, 6O90|1|A(4) 7P7Q|1|A, 7P7U|1|A, 7P7T|1|A, 7P7S|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_98632.5NR_4.0_98632.63.223(11) 6O90|1|A, 6O8Z|1|A, 6O8X|1|A, 6O8W|1|A, 7P7U|1|A, 7P7T|1|A, 7P7S|1|A, 7P7Q|1|A, 7NHK|1|A, 6WU9|1|A, 6W6P|1|A(0) (1) 7P7R|1|A

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17P7Q|1|AE. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volumeELECTRON MICROSCOPY2.42897
27P7T|1|APoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state IIIELECTRON MICROSCOPY2.92901
37P7S|1|APoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state IIELECTRON MICROSCOPY32901
47P7U|1|AE. faecalis 70S ribosome with P-tRNA, state IVELECTRON MICROSCOPY3.12824
57NHK|1|ALsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalisELECTRON MICROSCOPY2.92905
66O8X|1|ACryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02ELECTRON MICROSCOPY3.682898
76O90|1|ACryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05ELECTRON MICROSCOPY3.492903
86W6P|1|AMultiBody Refinement of 70S Ribosome from Enterococcus faecalisELECTRON MICROSCOPY2.92739
96WU9|1|A50S subunit of 70S Ribosome Enterococcus faecalis MultiBody refinementELECTRON MICROSCOPY2.92739
106O8Z|1|ACryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04ELECTRON MICROSCOPY3.492903
116O8W|1|ACryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01ELECTRON MICROSCOPY3.532903