Equivalence class NR_all_13071.2 Current
| # | IFE | Standardized name | Molecule | Organism | Domain | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6EM3|1|2 (rep) | 5.8S ribosomal RNA | 5.8S ribosomal RNA | Saccharomyces cerevisiae | Eukarya | RF00002 | State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes | ELECTRON MICROSCOPY | 3.2 | 2017-12-27 |
| 2 | 6EM4|1|2 | 5.8S ribosomal RNA | Saccharomyces cerevisiae genomic DNA sequence contains ITS1, 5.8S rRNA gene, ITS2, strain IMA 105Y | Saccharomyces cerevisiae | Eukarya | RF00002 | State B architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes | ELECTRON MICROSCOPY | 4.1 | 2017-12-27 |
| 3 | 6EM5|1|2 | 5.8S ribosomal RNA | 5.8S ribosomal RNA | Saccharomyces cerevisiae | Eukarya | RF00002 | State D architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes | ELECTRON MICROSCOPY | 4.3 | 2017-12-27 |
| 4 | 6I7O|1|BS | 5.8S ribosomal RNA | 5.8S ribosomal RNA | Saccharomyces cerevisiae | Eukarya | RF00002 | The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition. | ELECTRON MICROSCOPY | 5.3 | 2019-01-16 |
| 5 | 6I7O|1|YS | 5.8S ribosomal RNA | 5.8S ribosomal RNA | Saccharomyces cerevisiae | Eukarya | RF00002 | The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition. | ELECTRON MICROSCOPY | 5.3 | 2019-01-16 |
| 6 | 4V7F|1|2 | 5.8S ribosomal RNA | 5.8S ribosomal RNA | Saccharomyces cerevisiae | Eukarya | RF00002 | Arx1 pre-60S particle. | ELECTRON MICROSCOPY | 8.7 | 2014-07-09 |
| 7 | 5JCS|1|y | 5.8S ribosomal RNA | 5.8S ribosomal RNA | Saccharomyces cerevisiae | Eukarya | RF00002 | CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE | ELECTRON MICROSCOPY | 9.5 | 2016-11-16 |
Release history
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6I7O|1|BS | The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition. | ELECTRON MICROSCOPY | 5.3 | 157 |
| 2 | 6I7O|1|YS | The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition. | ELECTRON MICROSCOPY | 5.3 | 157 |
| 3 | 5JCS|1|y | CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE | ELECTRON MICROSCOPY | 9.5 | 158 |
| 4 | 6EM3|1|2 | State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes | ELECTRON MICROSCOPY | 3.2 | 157 |
| 5 | 6EM5|1|2 | State D architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes | ELECTRON MICROSCOPY | 4.3 | 158 |
| 6 | 6EM4|1|2 | State B architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes | ELECTRON MICROSCOPY | 4.1 | 158 |
| 7 | 4V7F|1|2 | Arx1 pre-60S particle. | ELECTRON MICROSCOPY | 8.7 | 158 |