#IFECompound(s)RNA source organismTitleMethodResolutionDate
15L00|1|A+ 5L00|1|B (rep)RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')Self-complimentary RNA 15mer binding with GMP monomersX-RAY DIFFRACTION1.252016-12-07
25L00|1|C+ 5L00|1|DRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')Self-complimentary RNA 15mer binding with GMP monomersX-RAY DIFFRACTION1.252016-12-07
35KRG|1|C+ 5KRG|1|DRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')RNA 15mer duplex binding with PZG monomerX-RAY DIFFRACTION1.62016-12-07
45KRG|1|A+ 5KRG|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')RNA 15mer duplex binding with PZG monomerX-RAY DIFFRACTION1.62016-12-07
56U6J|1|A+ 6U6J|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(DPG))-3')RNA-monomer complex containing pyrophosphate linkageX-RAY DIFFRACTION1.62019-11-20
66C8O|1|A+ 6C8O|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')RNA-activated 2-AIpG monomer, 3h soakingX-RAY DIFFRACTION1.852018-05-30
75V0H|1|A+ 5V0H|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')RNA duplex with 2-MeImpG analogue bound-one binding siteX-RAY DIFFRACTION1.92017-03-08
86C8N|1|A+ 6C8N|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')RNA-activated 2-AIpG monomer complex, 2h soakingX-RAY DIFFRACTION1.92018-05-30
96C8M|1|A+ 6C8M|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3'), RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')RNA-activated 2-AIpG monomer, 1.5h soakingX-RAY DIFFRACTION2.42018-05-30

Release history

Release3.101
Date2019-11-20

Parents


Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15V0H|1|A+5V0H|1|BRNA duplex with 2-MeImpG analogue bound-one binding siteX-RAY DIFFRACTION1.911
26U6J|1|A+6U6J|1|BRNA-monomer complex containing pyrophosphate linkageX-RAY DIFFRACTION1.610
35L00|1|A+5L00|1|BSelf-complimentary RNA 15mer binding with GMP monomersX-RAY DIFFRACTION1.2513
45L00|1|C+5L00|1|DSelf-complimentary RNA 15mer binding with GMP monomersX-RAY DIFFRACTION1.2513
55KRG|1|A+5KRG|1|BRNA 15mer duplex binding with PZG monomerX-RAY DIFFRACTION1.611
65KRG|1|C+5KRG|1|DRNA 15mer duplex binding with PZG monomerX-RAY DIFFRACTION1.611
76C8O|1|A+6C8O|1|BRNA-activated 2-AIpG monomer, 3h soakingX-RAY DIFFRACTION1.8511
86C8N|1|A+6C8N|1|BRNA-activated 2-AIpG monomer complex, 2h soakingX-RAY DIFFRACTION1.911
96C8M|1|A+6C8M|1|BRNA-activated 2-AIpG monomer, 1.5h soakingX-RAY DIFFRACTION2.411