#IFECompound(s)RNA source organismTitleMethodResolutionDate
14V9B|1|AC (rep)TRNA-FMET, MRNAThermus thermophilusCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.12014-07-09
24V5M|1|AVTRNA, MRNAThermus thermophilustRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)ELECTRON MICROSCOPY7.82014-07-09
34V95|1|AVP-site fMet-tRNA, mRNAThermus thermophilusCrystal structure of YAEJ bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
44V8X|1|CVtransfer RNA, BACTERIAL TOXIN YOEBThermus thermophilusStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.352014-07-09
54V9A|1|ACTRNA-FMET, MRNAThermus thermophilusCrystal Structure of the 70S ribosome with tetracycline.X-RAY DIFFRACTION3.32014-07-09
64V5N|1|AVTRNA, MRNAThermus thermophilustRNA translocation on the 70S ribosome: the post- translocational translocation intermediate TI(POST)ELECTRON MICROSCOPY7.62014-07-09
74V9N|1|AWP-site tRNA-fMet, messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')Thermus thermophilusCrystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.X-RAY DIFFRACTION3.42014-07-09
84V9N|1|CWP-site tRNA-fMet, messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')Thermus thermophilusCrystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.X-RAY DIFFRACTION3.42014-07-09
93J9Z|1|S6P-tRNAThermus thermophilusActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62015-07-01
104V8X|1|AVtransfer RNA, 5'-R(*GP*GP*CP*AP*AP*GP*GP*AP*GP*GP*UP*AP*AP*AP *AP*AP*UP*G U2M A2M A2MP*AP*AP*AP*A)-3'Thermus thermophilusStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.352014-07-09
114V7J|1|AvRNA (77-MER), RNA (5'-R(*GP*GP*CP*AP*AP*GP*GP*AP*GP*GP*UP*A*AP*AP*AP*AP*UP*GP*(OMU)P*(A2M)P*(OMG)P*AP*AP*AP*A)-3')Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.32014-07-09
124V7J|1|BvRNA (77-MER), RNA (5'-R(*GP*GP*CP*AP*AP*GP*GP*AP*GP*GP*UP*A*AP*AP*AP*AP*UP*GP*(OMU)P*(A2M)P*(OMG)P*AP*AP*AP*A)-3')Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.32014-07-09
134V9B|1|CCTRNA-FMET, MRNAThermus thermophilusCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.12014-07-09
144V95|1|CVP-site fMet-tRNA, mRNAThermus thermophilusCrystal structure of YAEJ bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
155E81|1|2KtRNA-fMet, mRNAThermus thermophilusStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-RAY DIFFRACTION2.952016-01-27
165E81|1|2LtRNA-fMet, mRNAThermus thermophilusStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-RAY DIFFRACTION2.952016-01-27
174V7K|1|BvRNA (77-MER), RNA (5'-R(*A*AP*GP*UP*AP*AP*AP*AP*AP*UP*GP*UP*A*(CCC))-3')Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.62014-07-09
184WT8|1|C4P site trNA, mRNAThermus thermophilusCrystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-RAY DIFFRACTION3.42015-01-21
194V9A|1|CCTRNA-FMET, MRNAThermus thermophilusCrystal Structure of the 70S ribosome with tetracycline.X-RAY DIFFRACTION3.32014-07-09
204L47|1|QVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Thermus thermophilusCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION3.222014-08-06
213JA1|1|S2P/E-tRNA, mRNAThermus thermophilusActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62015-07-01
224L47|1|XVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Thermus thermophilusCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION3.222014-08-06
234V68|1|AVP-SITE TRNA, SYNTHETIC MRNAThermus thermophilusT. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.ELECTRON MICROSCOPY6.42014-07-09
244V7K|1|AvRNA (77-MER), RNA (5'-R(*A*AP*GP*UP*AP*AP*AP*AP*AP*UP*GP*UP*A*(CCC))-3')Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.62014-07-09
254V8U|1|AWRNAThermus thermophilusCrystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-RAY DIFFRACTION3.72014-07-09
264V8U|1|CWRNAThermus thermophilusCrystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-RAY DIFFRACTION3.72014-07-09
274V4J|1|zP-site tRNAfMET, MRNAThermus thermophilusInteractions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome.X-RAY DIFFRACTION3.832014-07-09
284V9B|1|ADTRNA-FMETThermus thermophilusCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.12014-07-09
294V7K|1|BwRNA (77-MER)Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.62014-07-09
304V8X|1|CWtransfer RNAThermus thermophilusStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.352014-07-09
314V5A|1|AWTRNA-FMETEscherichia coliStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.52014-07-09
324V7K|1|AwRNA (77-MER)Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.62014-07-09
334V8X|1|AWtransfer RNAThermus thermophilusStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.352014-07-09
344V7J|1|BwRNA (77-MER)Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.32014-07-09
354V7J|1|AwRNA (77-MER)Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.32014-07-09
364V5A|1|CWTRNA-FMETEscherichia coliStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.52014-07-09
374V9B|1|CDTRNA-FMETThermus thermophilusCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.12014-07-09

Release history

Release2.602.612.622.632.642.652.662.672.682.692.702.712.722.732.742.752.76
Date2016-01-292016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-012016-04-082016-04-152016-04-222016-04-292016-05-062016-05-132016-05-20

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_20721.4NR_20.0_20721.52.77(37) 3J9Z|1|S6, 4V4J|1|z, 4V5N|1|AV, 4V7J|1|Bv, 4V7K|1|Bv, 4V8X|1|AV, 4V95|1|AV, 4V9B|1|AC, 4V9N|1|AW, 5E81|1|2L, 4L47|1|XV, 4V5M|1|AV, 4V7J|1|Aw, 4V7K|1|Aw, 4V8U|1|CW, 4V8X|1|CW, 4V9A|1|CC, 4V9B|1|CD, 5E81|1|2K, 4L47|1|QV, 4V5A|1|CW, 4V7J|1|Av, 4V7K|1|Av, 4V8U|1|AW, 4V8X|1|CV, 4V9A|1|AC, 4V9B|1|CC, 4WT8|1|C4, 3JA1|1|S2, 4V5A|1|AW, 4V68|1|AV, 4V7J|1|Bw, 4V7K|1|Bw, 4V8X|1|AW, 4V95|1|CV, 4V9B|1|AD, 4V9N|1|CW(0) (1) 5J8B|1|x
NR_all_20721.4NR_3.0_20721.52.77(2) 5E81|1|2K, 5E81|1|2L(35) 4V9A|1|CC, 4V9B|1|CD, 3J9Z|1|S6, 4V4J|1|z, 4V5N|1|AV, 4V7J|1|Bv, 4V7K|1|Bv, 4V8X|1|AV, 4V95|1|AV, 4V9B|1|AC, 4V9N|1|AW, 4L47|1|XV, 4V5M|1|AV, 4V7J|1|Aw, 4V7K|1|Aw, 4V8U|1|CW, 4V8X|1|CW, 4V9A|1|AC, 4V9B|1|CC, 4WT8|1|C4, 4L47|1|QV, 4V5A|1|CW, 4V7J|1|Av, 4V7K|1|Av, 4V8U|1|AW, 4V8X|1|CV, 4V9B|1|AD, 4V9N|1|CW, 3JA1|1|S2, 4V5A|1|AW, 4V68|1|AV, 4V7J|1|Bw, 4V7K|1|Bw, 4V8X|1|AW, 4V95|1|CV(1) 5J8B|1|x
NR_all_20721.4NR_3.5_20721.52.77(25) 5E81|1|2K, 4V9B|1|AD, 4V8X|1|AW, 4V5A|1|CW, 4V9B|1|CC, 5E81|1|2L, 4V7J|1|Av, 4V8X|1|CV, 4V9B|1|CD, 4V95|1|CV, 4V7J|1|Aw, 4V8X|1|CW, 4V9A|1|AC, 4V9N|1|AW, 4V7J|1|Bv, 4V95|1|AV, 4V9A|1|CC, 4V9N|1|CW, 4V7J|1|Bw, 4V9B|1|AC, 4WT8|1|C4, 4V8X|1|AV, 4V5A|1|AW, 4L47|1|QV, 4L47|1|XV(12) 4V7K|1|Av, 4V8U|1|AW, 3J9Z|1|S6, 4V5N|1|AV, 4V4J|1|z, 4V7K|1|Bv, 3JA1|1|S2, 4V68|1|AV, 4V7K|1|Bw, 4V8U|1|CW, 4V5M|1|AV, 4V7K|1|Aw(1) 5J8B|1|x
NR_all_20721.4NR_4.0_20721.52.77(34) 4V9N|1|AW, 4V5A|1|CW, 4V9N|1|CW, 4V7J|1|Aw, 5E81|1|2K, 4V7J|1|Bv, 5E81|1|2L, 4V7J|1|Bw, 4V7K|1|Aw, 4V7K|1|Bv, 4V7K|1|Bw, 4V8U|1|CW, 4V8X|1|AV, 4V8X|1|AW, 4V8X|1|CW, 4V95|1|AV, 4V95|1|CV, 3J9Z|1|S6, 4V9A|1|CC, 3JA1|1|S2, 4V9B|1|AC, 4L47|1|QV, 4V9B|1|AD, 4V4J|1|z, 4V9B|1|CD, 4V5A|1|AW, 4V7J|1|Av, 4WT8|1|C4, 4V7K|1|Av, 4V8U|1|AW, 4V8X|1|CV, 4V9A|1|AC, 4L47|1|XV, 4V9B|1|CC(3) 4V5N|1|AV, 4V68|1|AV, 4V5M|1|AV(1) 5J8B|1|x
NR_all_20721.4NR_all_20721.52.77(37) 4V9A|1|AC, 4V9B|1|CC, 4L47|1|QV, 4WT8|1|C4, 4V5A|1|CW, 4V7J|1|Av, 4V7K|1|Av, 4V8U|1|AW, 4V8X|1|CV, 4V95|1|CV, 4V9B|1|AD, 3JA1|1|S2, 4V9N|1|CW, 4V5A|1|AW, 4V68|1|AV, 4V7J|1|Bw, 4V7K|1|Bw, 4V8X|1|AW, 4V95|1|AV, 4V9B|1|AC, 3J9Z|1|S6, 4V9N|1|AW, 4V4J|1|z, 5E81|1|2L, 4V5N|1|AV, 4V7J|1|Bv, 4V7K|1|Bv, 4V8X|1|AV, 4V8X|1|CW, 4V9A|1|CC, 4V9B|1|CD, 4L47|1|XV, 5E81|1|2K, 4V5M|1|AV, 4V7J|1|Aw, 4V7K|1|Aw, 4V8U|1|CW(0) (1) 5J8B|1|x

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength