Equivalence class NR_all_21280.19 Obsolete
# | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
---|---|---|---|---|---|---|---|
1 | 4KZY|1|i (rep) | 18S Ribosomal RNA | Oryctolagus cuniculus | Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A. | X-RAY DIFFRACTION | 7.01 | 2013-07-24 |
2 | 4KZZ|1|i | 18S Ribosomal RNA | Oryctolagus cuniculus | Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A | X-RAY DIFFRACTION | 7.03 | 2013-07-24 |
3 | 4KZX|1|i | 18S ribosomal RNA | Oryctolagus cuniculus | Rabbit 40S ribosomal subunit in complex with eIF1. | X-RAY DIFFRACTION | 7.81 | 2013-07-24 |
4 | 7O7Y|1|A2 | 18S rRNA | Oryctolagus cuniculus | Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (high resolution) | ELECTRON MICROSCOPY | 2.2 | 2021-06-02 |
5 | 7O7Z|1|A2 | 18S rRNA | Oryctolagus cuniculus | Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot) | ELECTRON MICROSCOPY | 2.4 | 2021-06-02 |
6 | 7JQB|1|A | rRNA | Oryctolagus cuniculus | SARS-CoV-2 Nsp1 and rabbit 40S ribosome complex | ELECTRON MICROSCOPY | 2.7 | 2020-12-02 |
7 | 6SGC|1|A1 | 18S ribosomal RNA | Oryctolagus cuniculus | Rabbit 80S ribosome stalled on a poly(A) tail | ELECTRON MICROSCOPY | 2.8 | 2019-12-04 |
8 | 7O80|1|A2 | 18S rRNA | Oryctolagus cuniculus | Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site | ELECTRON MICROSCOPY | 2.9 | 2021-06-02 |
9 | 7NWI|1|9 | 18S ribosomal RNA | Oryctolagus cuniculus | Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S | ELECTRON MICROSCOPY | 3.13 | 2021-07-07 |
10 | 6YAL|1|2 | 18S ribosomal RNA | Oryctolagus cuniculus | Mammalian 48S late-stage initiation complex with beta-globin mRNA | ELECTRON MICROSCOPY | 3 | 2020-04-08 |
11 | 6R5Q|1|K | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of XBP1u-paused ribosome nascent chain complex (post-state) | ELECTRON MICROSCOPY | 3 | 2019-07-10 |
12 | 7O81|1|A2 | 18S rRNA | Oryctolagus cuniculus | Rabbit 80S ribosome colliding in another ribosome stalled by the SARS-CoV-2 pseudoknot | ELECTRON MICROSCOPY | 3.1 | 2021-06-02 |
13 | 6ZVK|1|K3 | 18S RIBOSOMAL RNA | Oryctolagus cuniculus | The Halastavi arva virus (HalV) intergenic region IRES promotes translation by the simplest possible initiation mechanism | ELECTRON MICROSCOPY | 3.49 | 2020-12-23 |
14 | 6P5I|1|2 | 18S rRNA | Oryctolagus cuniculus | Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 1) | ELECTRON MICROSCOPY | 3.1 | 2019-09-18 |
15 | 6P5K|1|2 | 18S rRNA | Oryctolagus cuniculus | Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 3) | ELECTRON MICROSCOPY | 3.1 | 2019-09-18 |
16 | 6P5J|1|2 | 18S rRNA | Oryctolagus cuniculus | Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 2) | ELECTRON MICROSCOPY | 3.1 | 2019-09-18 |
17 | 6P4G|1|2 | 18S rRNA | Oryctolagus cuniculus | Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 1) | ELECTRON MICROSCOPY | 3.1 | 2019-09-18 |
18 | 7MDZ|1|9 | 18S rRNA | Oryctolagus cuniculus | 80S rabbit ribosome stalled with benzamide-CHX | ELECTRON MICROSCOPY | 3.2 | 2021-09-01 |
19 | 6R6P|1|K | 18S rRNA | Oryctolagus cuniculus | Structure of XBP1u-paused ribosome nascent chain complex (rotated state) | ELECTRON MICROSCOPY | 3.1 | 2019-07-10 |
20 | 6P4H|1|2 | 18S rRNA | Oryctolagus cuniculus | Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 2) | ELECTRON MICROSCOPY | 3.2 | 2019-09-18 |
21 | 6P5N|1|2 | 18S rRNA | Oryctolagus cuniculus | Structure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1 | ELECTRON MICROSCOPY | 3.2 | 2019-09-25 |
22 | 6D9J|1|2 | 18S rRNA | Oryctolagus cuniculus | Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1. | ELECTRON MICROSCOPY | 3.2 | 2018-06-06 |
23 | 7JQC|1|A | rRNA | Oryctolagus cuniculus | SARS-CoV-2 Nsp1, CrPV IRES and rabbit 40S ribosome complex | ELECTRON MICROSCOPY | 3.3 | 2020-12-02 |
24 | 5LZS|1|9 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B | ELECTRON MICROSCOPY | 3.31 | 2016-11-30 |
25 | 6W2T|1|a | 18S rRNA | Oryctolagus cuniculus | Structure of the Cricket Paralysis Virus 5-UTR IRES (CrPV 5-UTR-IRES) bound to the small ribosomal subunit in the closed state (Class 2) | ELECTRON MICROSCOPY | 3.36 | 2020-04-22 |
26 | 7A01|1|K3 | 18S RIBOSOMAL RNA | Oryctolagus cuniculus | The Halastavi arva virus intergenic region IRES promotes translation by the simplest possible initiation mechanism | ELECTRON MICROSCOPY | 3.6 | 2020-12-30 |
27 | 6MTD|1|9 | 18S rRNA | Oryctolagus cuniculus | Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel) | ELECTRON MICROSCOPY | 3.3 | 2018-11-21 |
28 | 5LZV|1|9 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1. | ELECTRON MICROSCOPY | 3.35 | 2016-11-30 |
29 | 6D90|1|2 | 18S rRNA | Oryctolagus cuniculus | Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1. | ELECTRON MICROSCOPY | 3.2 | 2018-06-06 |
30 | 6YAN|1|2 | 18S ribosomal RNA | Oryctolagus cuniculus | Mammalian 48S late-stage translation initiation complex with histone 4 mRNA | ELECTRON MICROSCOPY | 3.48 | 2020-04-08 |
31 | 6MTC|1|9 | 18S rRNA | Oryctolagus cuniculus | Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state) | ELECTRON MICROSCOPY | 3.4 | 2018-11-21 |
32 | 6MTE|1|9 | 18S rRNA | Oryctolagus cuniculus | Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state) | ELECTRON MICROSCOPY | 3.4 | 2018-11-21 |
33 | 6W2S|1|A | 18S rRNA | Oryctolagus cuniculus | Structure of the Cricket Paralysis Virus 5-UTR IRES (CrPV 5-UTR-IRES) bound to the small ribosomal subunit in the open state (Class 1) | ELECTRON MICROSCOPY | 3.47 | 2020-04-22 |
34 | 6GZ5|1|B1 | 18S ribosomal RNA | Oryctolagus cuniculus | tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3) | ELECTRON MICROSCOPY | 3.5 | 2018-12-05 |
35 | 5LZZ|1|9 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of the mammalian rescue complex with Pelota and Hbs1l (combined) | ELECTRON MICROSCOPY | 3.47 | 2016-11-30 |
36 | 5LZW|1|9 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA. | ELECTRON MICROSCOPY | 3.53 | 2016-11-30 |
37 | 5LZX|1|9 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon. | ELECTRON MICROSCOPY | 3.67 | 2016-11-30 |
38 | 6GZ3|1|B1 | 18S ribosomal RNA | Oryctolagus cuniculus | tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1) | ELECTRON MICROSCOPY | 3.6 | 2018-12-05 |
39 | 7NWG|1|A2 | 18S Ribosomal RNA | Oryctolagus cuniculus | Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S. | ELECTRON MICROSCOPY | 3.8 | 2021-07-07 |
40 | 6GZ4|1|B1 | 18S ribosomal RNA | Oryctolagus cuniculus | tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2) | ELECTRON MICROSCOPY | 3.6 | 2018-12-05 |
41 | 5LZT|1|9 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of the mammalian ribosomal termination complex with eRF1 and eRF3. | ELECTRON MICROSCOPY | 3.65 | 2016-11-30 |
42 | 6YAM|1|2 | 18S ribosomal RNA | Oryctolagus cuniculus | Mammalian 48S late-stage translation initiation complex (LS48S+eIF3 IC) with beta-globin mRNA | ELECTRON MICROSCOPY | 3.6 | 2020-04-08 |
43 | 6MTB|1|9 | 18S rRNA | Oryctolagus cuniculus | Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state) | ELECTRON MICROSCOPY | 3.6 | 2018-11-21 |
44 | 6HCJ|1|A2 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs | ELECTRON MICROSCOPY | 3.8 | 2018-10-17 |
45 | 6R6G|1|K | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of XBP1u-paused ribosome nascent chain complex with SRP. | ELECTRON MICROSCOPY | 3.7 | 2019-07-10 |
46 | 5LZU|1|9 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of the mammalian ribosomal termination complex with accommodated eRF1 | ELECTRON MICROSCOPY | 3.75 | 2016-11-30 |
47 | 6HCF|1|A1 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codon | ELECTRON MICROSCOPY | 3.9 | 2018-10-17 |
48 | 6R7Q|1|K | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of XBP1u-paused ribosome nascent chain complex with Sec61. | ELECTRON MICROSCOPY | 3.9 | 2019-07-10 |
49 | 3JAH|1|9 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon | ELECTRON MICROSCOPY | 3.45 | 2015-08-12 |
50 | 5LZY|1|9 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA. | ELECTRON MICROSCOPY | 3.99 | 2016-11-30 |
51 | 7NWH|1|9 | 18S Ribosomal RNA | Oryctolagus cuniculus | Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S. | ELECTRON MICROSCOPY | 4.1 | 2021-07-07 |
52 | 5FLX|1|1 | 18S RRNA | Oryctolagus cuniculus | Mammalian 40S HCV-IRES complex | ELECTRON MICROSCOPY | 3.9 | 2015-12-23 |
53 | 3JAG|1|9 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon | ELECTRON MICROSCOPY | 3.65 | 2015-08-12 |
54 | 3JAI|1|9 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon | ELECTRON MICROSCOPY | 3.65 | 2015-08-12 |
55 | 5K0Y|1|A | 18S ribosomal RNA | Oryctolagus cuniculus | m48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit face | ELECTRON MICROSCOPY | 5.8 | 2016-07-13 |
56 | 6HCQ|1|A2 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of the rabbit collided di-ribosome (collided monosome) | ELECTRON MICROSCOPY | 6.5 | 2018-10-17 |
57 | 6HCM|1|A1 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of the rabbit collided di-ribosome (stalled monosome) | ELECTRON MICROSCOPY | 6.8 | 2018-10-17 |
58 | 4UJE|1|B1 | 18S Ribosomal RNA | Oryctolagus cuniculus | Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement | ELECTRON MICROSCOPY | 6.9 | 2014-07-16 |
59 | 3JAN|1|S2 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of the scanning state of the mammalian SRP-ribosome complex | ELECTRON MICROSCOPY | 3.75 | 2015-08-05 |
60 | 3JAJ|1|S2 | 18S ribosomal RNA | Oryctolagus cuniculus | Structure of the engaged state of the mammalian SRP-ribosome complex | ELECTRON MICROSCOPY | 3.75 | 2015-08-05 |
61 | 4UJD|1|C1 | 18S Ribosomal RNA | Oryctolagus cuniculus | mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like state | ELECTRON MICROSCOPY | 8.9 | 2014-07-30 |
62 | 4D61|1|1 | 18S RRNA | Oryctolagus cuniculus | Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state | ELECTRON MICROSCOPY | 9 | 2015-03-04 |
63 | 4D5L|1|1 | 18S RRNA 2 | Oryctolagus cuniculus | Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state | ELECTRON MICROSCOPY | 9 | 2015-02-04 |
64 | 4UJC|1|C1 | 18S RIBOSOMAL RNA | Oryctolagus cuniculus | mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state | ELECTRON MICROSCOPY | 9.5 | 2014-07-30 |
Release history
Release | 3.194 | 3.195 | 3.196 | 3.197 | 3.198 | 3.199 | 3.200 | 3.201 | 3.202 | 3.203 | 3.204 | 3.205 | 3.206 | 3.207 | 3.208 | 3.209 | 3.210 | 3.211 | 3.212 | 3.213 | 3.214 | 3.215 | 3.216 | 3.217 | 3.218 | 3.219 | 3.220 | 3.221 | 3.222 | 3.223 | 3.224 | 3.225 | 3.226 | 3.227 | 3.228 | 3.229 | 3.230 | 3.231 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2021-09-01 | 2021-09-08 | 2021-09-15 | 2021-09-22 | 2021-09-29 | 2021-10-06 | 2021-10-13 | 2021-10-20 | 2021-10-27 | 2021-11-03 | 2021-11-10 | 2021-11-17 | 2021-11-24 | 2021-12-01 | 2021-12-08 | 2021-12-15 | 2021-12-22 | 2021-12-29 | 2022-01-05 | 2022-01-12 | 2022-01-19 | 2022-01-26 | 2022-02-02 | 2022-02-09 | 2022-02-16 | 2022-02-23 | 2022-03-02 | 2022-03-09 | 2022-03-16 | 2022-03-23 | 2022-03-30 | 2022-04-06 | 2022-04-13 | 2022-04-20 | 2022-04-27 | 2022-05-04 | 2022-05-11 | 2022-05-18 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
---|---|---|---|---|---|
NR_all_21280.19 | NR_all_21280.18 | 3.194 | (63) 3JAI|1|9, 6MTD|1|9, 3JAH|1|9, 6MTC|1|9, 3JAG|1|9, 6MTB|1|9, 6HCQ|1|A2, 6HCM|1|A1, 7O81|1|A2, 6HCJ|1|A2, 7O80|1|A2, 6HCF|1|A1, 7O7Z|1|A2, 6GZ5|1|B1, 7O7Y|1|A2, 6GZ4|1|B1, 7NWI|1|9, 6GZ3|1|B1, 7NWH|1|9, 6D9J|1|2, 7NWG|1|A2, 6D90|1|2, 7JQC|1|A, 5LZZ|1|9, 7JQB|1|A, 5LZY|1|9, 7A01|1|K3, 5LZX|1|9, 6ZVK|1|K3, 5LZW|1|9, 6YAN|1|2, 5LZV|1|9, 6YAM|1|2, 5LZU|1|9, 6YAL|1|2, 5LZT|1|9, 6W2T|1|a, 5LZS|1|9, 6W2S|1|A, 5K0Y|1|A, 6SGC|1|A1, 5FLX|1|1, 6R7Q|1|K, 4UJE|1|B1, 6R6P|1|K, 4UJD|1|C1, 6R6G|1|K, 4UJC|1|C1, 6R5Q|1|K, 4KZZ|1|i, 6P5N|1|2, 4KZY|1|i, 6P5K|1|2, 4KZX|1|i, 6P5J|1|2, 4D61|1|1, 6P5I|1|2, 4D5L|1|1, 6P4H|1|2, 3JAN|1|S2, 6P4G|1|2, 3JAJ|1|S2, 6MTE|1|9 | (1) 7MDZ|1|9 | (0) |
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
---|---|---|---|---|---|
NR_all_21280.19 | NR_all_21280.20 | 3.232 | (64) 7O7Y|1|A2, 5LZX|1|9, 6HCF|1|A1, 6P4G|1|2, 6R6P|1|K, 3JAN|1|S2, 6ZVK|1|K3, 4UJE|1|B1, 7NWI|1|9, 5LZW|1|9, 6GZ5|1|B1, 6MTE|1|9, 6R6G|1|K, 3JAJ|1|S2, 6YAN|1|2, 4UJD|1|C1, 7NWH|1|9, 5LZV|1|9, 6GZ4|1|B1, 6MTD|1|9, 6R5Q|1|K, 3JAI|1|9, 6YAM|1|2, 4UJC|1|C1, 5LZU|1|9, 6GZ3|1|B1, 6MTC|1|9, 6P5N|1|2, 3JAH|1|9, 6YAL|1|2, 4KZZ|1|i, 7NWG|1|A2, 5LZT|1|9, 6D9J|1|2, 6MTB|1|9, 6P5K|1|2, 3JAG|1|9, 6W2T|1|a, 4KZY|1|i, 7MDZ|1|9, 5LZS|1|9, 7O81|1|A2, 6D90|1|2, 6HCQ|1|A2, 6P5J|1|2, 6W2S|1|A, 4KZX|1|i, 7JQC|1|A, 5K0Y|1|A, 7O80|1|A2, 5LZZ|1|9, 6HCM|1|A1, 6P5I|1|2, 6SGC|1|A1, 4D61|1|1, 7JQB|1|A, 7O7Z|1|A2, 5LZY|1|9, 6HCJ|1|A2, 6P4H|1|2, 6R7Q|1|K, 4D5L|1|1, 7A01|1|K3, 5FLX|1|1 | (0) | (2) 7TOQ|1|A18S, 7TOR|1|A18S |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|
1 | 4UJD|1|C1 | mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like state | ELECTRON MICROSCOPY | 8.9 | 1742 |
2 | 4UJC|1|C1 | mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state | ELECTRON MICROSCOPY | 9.5 | 1742 |
3 | 4D5L|1|1 | Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state | ELECTRON MICROSCOPY | 9 | 1742 |
4 | 4D61|1|1 | Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state | ELECTRON MICROSCOPY | 9 | 1742 |
5 | 4UJE|1|B1 | Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement | ELECTRON MICROSCOPY | 6.9 | 1742 |
6 | 5K0Y|1|A | m48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit face | ELECTRON MICROSCOPY | 5.8 | 1776 |
7 | 4KZX|1|i | Rabbit 40S ribosomal subunit in complex with eIF1. | X-RAY DIFFRACTION | 7.81 | 1797 |
8 | 4KZY|1|i | Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A. | X-RAY DIFFRACTION | 7.01 | 1840 |
9 | 4KZZ|1|i | Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A | X-RAY DIFFRACTION | 7.03 | 1797 |
10 | 3JAN|1|S2 | Structure of the scanning state of the mammalian SRP-ribosome complex | ELECTRON MICROSCOPY | 3.75 | 1742 |
11 | 3JAJ|1|S2 | Structure of the engaged state of the mammalian SRP-ribosome complex | ELECTRON MICROSCOPY | 3.75 | 1742 |
12 | 3JAI|1|9 | Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon | ELECTRON MICROSCOPY | 3.65 | 1719 |
13 | 3JAG|1|9 | Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon | ELECTRON MICROSCOPY | 3.65 | 1719 |
14 | 3JAH|1|9 | Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon | ELECTRON MICROSCOPY | 3.45 | 1719 |
15 | 6ZVK|1|K3 | The Halastavi arva virus (HalV) intergenic region IRES promotes translation by the simplest possible initiation mechanism | ELECTRON MICROSCOPY | 3.49 | 1869 |
16 | 7A01|1|K3 | The Halastavi arva virus intergenic region IRES promotes translation by the simplest possible initiation mechanism | ELECTRON MICROSCOPY | 3.6 | 1801 |
17 | 7NWI|1|9 | Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S | ELECTRON MICROSCOPY | 3.13 | 1719 |
18 | 6YAM|1|2 | Mammalian 48S late-stage translation initiation complex (LS48S+eIF3 IC) with beta-globin mRNA | ELECTRON MICROSCOPY | 3.6 | 1742 |
19 | 6YAL|1|2 | Mammalian 48S late-stage initiation complex with beta-globin mRNA | ELECTRON MICROSCOPY | 3 | 1743 |
20 | 6YAN|1|2 | Mammalian 48S late-stage translation initiation complex with histone 4 mRNA | ELECTRON MICROSCOPY | 3.48 | 1743 |
21 | 7NWH|1|9 | Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S. | ELECTRON MICROSCOPY | 4.1 | 1698 |
22 | 6D90|1|2 | Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1. | ELECTRON MICROSCOPY | 3.2 | 1697 |
23 | 6HCF|1|A1 | Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codon | ELECTRON MICROSCOPY | 3.9 | 1732 |
24 | 6HCM|1|A1 | Structure of the rabbit collided di-ribosome (stalled monosome) | ELECTRON MICROSCOPY | 6.8 | 1732 |
25 | 7NWG|1|A2 | Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S. | ELECTRON MICROSCOPY | 3.8 | 1740 |
26 | 6HCJ|1|A2 | Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs | ELECTRON MICROSCOPY | 3.8 | 1740 |
27 | 6HCQ|1|A2 | Structure of the rabbit collided di-ribosome (collided monosome) | ELECTRON MICROSCOPY | 6.5 | 1740 |
28 | 6P5N|1|2 | Structure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1 | ELECTRON MICROSCOPY | 3.2 | 1697 |
29 | 6GZ5|1|B1 | tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3) | ELECTRON MICROSCOPY | 3.5 | 1708 |
30 | 7O7Z|1|A2 | Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot) | ELECTRON MICROSCOPY | 2.4 | 1688 |
31 | 7O7Y|1|A2 | Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (high resolution) | ELECTRON MICROSCOPY | 2.2 | 1688 |
32 | 7O80|1|A2 | Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site | ELECTRON MICROSCOPY | 2.9 | 1688 |
33 | 7O81|1|A2 | Rabbit 80S ribosome colliding in another ribosome stalled by the SARS-CoV-2 pseudoknot | ELECTRON MICROSCOPY | 3.1 | 1688 |
34 | 6R6P|1|K | Structure of XBP1u-paused ribosome nascent chain complex (rotated state) | ELECTRON MICROSCOPY | 3.1 | 1698 |
35 | 6R6G|1|K | Structure of XBP1u-paused ribosome nascent chain complex with SRP. | ELECTRON MICROSCOPY | 3.7 | 1698 |
36 | 6R5Q|1|K | Structure of XBP1u-paused ribosome nascent chain complex (post-state) | ELECTRON MICROSCOPY | 3 | 1698 |
37 | 6R7Q|1|K | Structure of XBP1u-paused ribosome nascent chain complex with Sec61. | ELECTRON MICROSCOPY | 3.9 | 1698 |
38 | 6MTC|1|9 | Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state) | ELECTRON MICROSCOPY | 3.4 | 1664 |
39 | 6MTB|1|9 | Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state) | ELECTRON MICROSCOPY | 3.6 | 1664 |
40 | 5LZS|1|9 | Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B | ELECTRON MICROSCOPY | 3.31 | 1697 |
41 | 5LZT|1|9 | Structure of the mammalian ribosomal termination complex with eRF1 and eRF3. | ELECTRON MICROSCOPY | 3.65 | 1698 |
42 | 5LZV|1|9 | Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1. | ELECTRON MICROSCOPY | 3.35 | 1698 |
43 | 5LZU|1|9 | Structure of the mammalian ribosomal termination complex with accommodated eRF1 | ELECTRON MICROSCOPY | 3.75 | 1698 |
44 | 5LZW|1|9 | Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA. | ELECTRON MICROSCOPY | 3.53 | 1698 |
45 | 5LZX|1|9 | Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon. | ELECTRON MICROSCOPY | 3.67 | 1698 |
46 | 5LZZ|1|9 | Structure of the mammalian rescue complex with Pelota and Hbs1l (combined) | ELECTRON MICROSCOPY | 3.47 | 1698 |
47 | 5LZY|1|9 | Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA. | ELECTRON MICROSCOPY | 3.99 | 1698 |
48 | 6SGC|1|A1 | Rabbit 80S ribosome stalled on a poly(A) tail | ELECTRON MICROSCOPY | 2.8 | 1697 |
49 | 7MDZ|1|9 | 80S rabbit ribosome stalled with benzamide-CHX | ELECTRON MICROSCOPY | 3.2 | 1697 |
50 | 7JQB|1|A | SARS-CoV-2 Nsp1 and rabbit 40S ribosome complex | ELECTRON MICROSCOPY | 2.7 | 1697 |
51 | 7JQC|1|A | SARS-CoV-2 Nsp1, CrPV IRES and rabbit 40S ribosome complex | ELECTRON MICROSCOPY | 3.3 | 1697 |
52 | 6P4H|1|2 | Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 2) | ELECTRON MICROSCOPY | 3.2 | 1697 |
53 | 6P4G|1|2 | Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 1) | ELECTRON MICROSCOPY | 3.1 | 1697 |
54 | 6P5K|1|2 | Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 3) | ELECTRON MICROSCOPY | 3.1 | 1697 |
55 | 6P5I|1|2 | Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 1) | ELECTRON MICROSCOPY | 3.1 | 1697 |
56 | 6P5J|1|2 | Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 2) | ELECTRON MICROSCOPY | 3.1 | 1697 |
57 | 6MTE|1|9 | Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state) | ELECTRON MICROSCOPY | 3.4 | 1664 |
58 | 6MTD|1|9 | Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel) | ELECTRON MICROSCOPY | 3.3 | 1692 |
59 | 6GZ4|1|B1 | tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2) | ELECTRON MICROSCOPY | 3.6 | 1708 |
60 | 6GZ3|1|B1 | tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1) | ELECTRON MICROSCOPY | 3.6 | 1708 |
61 | 5FLX|1|1 | Mammalian 40S HCV-IRES complex | ELECTRON MICROSCOPY | 3.9 | 1708 |
62 | 6W2T|1|a | Structure of the Cricket Paralysis Virus 5-UTR IRES (CrPV 5-UTR-IRES) bound to the small ribosomal subunit in the closed state (Class 2) | ELECTRON MICROSCOPY | 3.36 | 1697 |
63 | 6W2S|1|A | Structure of the Cricket Paralysis Virus 5-UTR IRES (CrPV 5-UTR-IRES) bound to the small ribosomal subunit in the open state (Class 1) | ELECTRON MICROSCOPY | 3.47 | 1697 |
64 | 6D9J|1|2 | Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1. | ELECTRON MICROSCOPY | 3.2 | 1697 |