Equivalence class NR_all_50460.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4WCP|1|A+ 4WCP|1|B+ 4WCP|1|C (rep) | RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3') | Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site | X-ray diffraction | 2.4 | 2015-09-09 |
Release history
| Release | 2.40 | 2.41 | 2.42 | 2.43 | 2.44 | 2.45 | 2.46 | 2.47 | 2.48 | 2.49 | 2.50 | 2.51 | 2.52 | 2.53 | 2.54 | 2.55 | 2.56 | 2.57 | 2.58 | 2.59 | 2.60 | 2.61 | 2.62 | 2.63 | 2.64 | 2.65 | 2.66 | 2.67 | 2.68 | 2.69 | 2.70 | 2.71 | 2.72 | 2.73 | 2.74 | 2.75 | 2.76 | 2.77 | 2.78 | 2.79 | 2.80 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2015-09-11 | 2015-09-18 | 2015-09-25 | 2015-10-02 | 2015-10-09 | 2015-10-16 | 2015-10-23 | 2015-10-30 | 2015-11-06 | 2015-11-13 | 2015-11-20 | 2015-11-27 | 2015-12-04 | 2015-12-11 | 2015-12-18 | 2015-12-25 | 2016-01-01 | 2016-01-08 | 2016-01-15 | 2016-01-22 | 2016-01-29 | 2016-02-05 | 2016-02-12 | 2016-02-19 | 2016-02-26 | 2016-03-04 | 2016-03-11 | 2016-03-18 | 2016-03-25 | 2016-04-01 | 2016-04-08 | 2016-04-15 | 2016-04-22 | 2016-04-29 | 2016-05-06 | 2016-05-13 | 2016-05-20 | 2016-05-27 | 2016-06-03 | 2016-06-10 | 2016-06-17 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_50460.1 | NR_2.5_25780.1 | 2.81 | (1) 4WCP|1|A+4WCP|1|B+4WCP|1|C | (0) | (0) |
| NR_all_50460.1 | NR_20.0_25780.1 | 2.81 | (1) 4WCP|1|A+4WCP|1|B+4WCP|1|C | (0) | (4) 5BXK|1|C+5BXK|1|D, 5BXK|1|A+5BXK|1|B, 5BWS|1|C+5BWS|1|D, 5BWS|1|A+5BWS|1|B |
| NR_all_50460.1 | NR_3.0_25780.1 | 2.81 | (1) 4WCP|1|A+4WCP|1|B+4WCP|1|C | (0) | (2) 5BWS|1|A+5BWS|1|B, 5BWS|1|C+5BWS|1|D |
| NR_all_50460.1 | NR_3.5_25780.1 | 2.81 | (1) 4WCP|1|A+4WCP|1|B+4WCP|1|C | (0) | (4) 5BXK|1|C+5BXK|1|D, 5BXK|1|A+5BXK|1|B, 5BWS|1|C+5BWS|1|D, 5BWS|1|A+5BWS|1|B |
| NR_all_50460.1 | NR_4.0_25780.1 | 2.81 | (1) 4WCP|1|A+4WCP|1|B+4WCP|1|C | (0) | (4) 5BXK|1|C+5BXK|1|D, 5BXK|1|A+5BXK|1|B, 5BWS|1|C+5BWS|1|D, 5BWS|1|A+5BWS|1|B |
| NR_all_50460.1 | NR_all_25780.1 | 2.81 | (1) 4WCP|1|A+4WCP|1|B+4WCP|1|C | (0) | (4) 5BXK|1|C+5BXK|1|D, 5BXK|1|A+5BXK|1|B, 5BWS|1|C+5BWS|1|D, 5BWS|1|A+5BWS|1|B |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 4WCP|1|A+4WCP|1|B+4WCP|1|C | Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site | X-RAY DIFFRACTION | 2.4 | 22 |