#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17ZW0|1|sl (rep)Transfer RNAtRNA, mRNASaccharomyces cerevisiae W303EukaryaRF00005FAP-80S Complex - Rotated stateElectron microscopy2.42022-10-05
28AGX|1|xTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state with the RING domain of Ltn1 in the IN positionElectron microscopy2.42023-03-08
38AGX|1|yTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state with the RING domain of Ltn1 in the IN positionElectron microscopy2.42023-03-08
48AAF|1|xTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state GElectron microscopy2.52023-03-08
58AAF|1|yTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state GElectron microscopy2.52023-03-08
68AGT|1|xTransfer RNAA-site Ala aminoacyl-tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state FElectron microscopy2.62023-03-08
78AGV|1|xTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state HElectron microscopy2.62023-03-08
88AGW|1|xTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state DElectron microscopy2.62023-03-08
98AGZ|1|xTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state with the RING domain of Ltn1 in the OUT positionElectron microscopy2.62023-03-08
108AGT|1|yTransfer RNAP-site petidyl-tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state FElectron microscopy2.62023-03-08
118AGV|1|yTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state HElectron microscopy2.62023-03-08
128AGW|1|yTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state DElectron microscopy2.62023-03-08
138AGZ|1|yTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state with the RING domain of Ltn1 in the OUT positionElectron microscopy2.62023-03-08
148AGU|1|yTransfer RNAP-site tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state EElectron microscopy2.72023-03-08
156R84|1|BTransfer RNAtRNA-AlaSaccharomyces cerevisiaeEukaryaRF00005Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)Electron microscopy3.62019-06-26
166R87|1|BTransfer RNAtRNA-AlaSaccharomyces cerevisiaeEukaryaRF00005Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)Electron microscopy3.42019-06-26

Release history

Release3.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.331
Date2023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-17

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_53745.1NR_all_21015.23.273(3) 6R84|1|B, 7ZW0|1|sl, 6R87|1|B(13) 8AGX|1|y, 8AGX|1|x, 8AGW|1|y, 8AGW|1|x, 8AGV|1|y, 8AGZ|1|y, 8AGV|1|x, 8AGZ|1|x, 8AGU|1|y, 8AGT|1|y, 8AGT|1|x, 8AAF|1|y, 8AAF|1|x(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
18AGX|1|xYeast RQC complex in state with the RING domain of Ltn1 in the IN positionELECTRON MICROSCOPY2.473
28AGZ|1|xYeast RQC complex in state with the RING domain of Ltn1 in the OUT positionELECTRON MICROSCOPY2.673
38AGT|1|xYeast RQC complex in state FELECTRON MICROSCOPY2.674
48AAF|1|xYeast RQC complex in state GELECTRON MICROSCOPY2.573
58AGW|1|xYeast RQC complex in state DELECTRON MICROSCOPY2.674
68AGV|1|xYeast RQC complex in state HELECTRON MICROSCOPY2.674
78AGT|1|yYeast RQC complex in state FELECTRON MICROSCOPY2.673
88AGW|1|yYeast RQC complex in state DELECTRON MICROSCOPY2.673
98AGU|1|yYeast RQC complex in state EELECTRON MICROSCOPY2.773
108AGV|1|yYeast RQC complex in state HELECTRON MICROSCOPY2.673
118AGX|1|yYeast RQC complex in state with the RING domain of Ltn1 in the IN positionELECTRON MICROSCOPY2.472
128AGZ|1|yYeast RQC complex in state with the RING domain of Ltn1 in the OUT positionELECTRON MICROSCOPY2.672
138AAF|1|yYeast RQC complex in state GELECTRON MICROSCOPY2.572
147ZW0|1|slFAP-80S Complex - Rotated stateELECTRON MICROSCOPY2.476
156R87|1|BYeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)ELECTRON MICROSCOPY3.476
166R84|1|BYeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)ELECTRON MICROSCOPY3.676
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