Equivalence class NR_all_70012.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8D71|1|B (rep) | miR-122-21nt | Homo sapiens | Human Ago2 bound to miR122(21nt) | X-ray diffraction | 2.5 | 2023-05-03 | |||
| 2 | 8D6J|1|B | RNA (5'-R(P*UP*GP*GP*AP*GP*UP*GP*UP*GP*AP*CP*AP*AP*UP*GP*GP*UP*GP*UP*UP*U)-3') | synthetic construct | Human Ago2 bound to miR122(21nt) with PIWI loop swapped to AtAgo10 sequence | X-ray diffraction | 2.5 | 2023-05-03 | |||
| 3 | 5KI6|1|B | miR-122 | Homo sapiens | Eukarya | Human Argonaute-2 bound to a guide RNA with a nucleobase modification at position 1 | X-ray diffraction | 2.15 | 2016-07-20 |
Release history
| Release | 3.281 |
|---|---|
| Date | 2023-05-03 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_70012.1 | NR_all_35200.1 | 3.281 | (1) 5KI6|1|B | (2) 8D6J|1|B, 8D71|1|B | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 8D6J|1|B | Human Ago2 bound to miR122(21nt) with PIWI loop swapped to AtAgo10 sequence | X-RAY DIFFRACTION | 2.5 | 11 |
| 2 | 8D71|1|B | Human Ago2 bound to miR122(21nt) | X-RAY DIFFRACTION | 2.5 | 11 |
| 3 | 5KI6|1|B | Human Argonaute-2 bound to a guide RNA with a nucleobase modification at position 1 | X-RAY DIFFRACTION | 2.15 | 9 |